EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000027865 (Gene tree)
Gene ID: -
Gene Symbol: yars
Alias: -
Full Name: Xenopus tropicalis tyrosyl-tRNA synthetase (yars)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 20763 bases
Position: chrGL173188.1:498939-519701
Accession: NM_001004987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000057912	tRNA_bind	PF01588.20	2.4e-31	1	1
ENSXETP00000057912	tRNA-synt_1b	PF00579.25	2.8e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000057912	-	1908	-	ENSXETP00000057912	528 (aa)	-	F6T733

Gene Model

Click here to download ENSXETG00000027865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000027865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000027865	yars	100	79.356	ENSG00000134684	YARS	100	79.356	Homo_sapiens
ENSXETG00000027865	yars	100	74.672	ENSAPOG00000020788	yars	100	74.672	Acanthochromis_polyacanthus
ENSXETG00000027865	yars	100	79.356	ENSAMEG00000007476	YARS	100	79.356	Ailuropoda_melanoleuca
ENSXETG00000027865	yars	100	73.864	ENSACIG00000017504	yars	100	73.864	Amphilophus_citrinellus
ENSXETG00000027865	yars	100	75.281	ENSAOCG00000009987	yars	100	75.281	Amphiprion_ocellaris
ENSXETG00000027865	yars	100	75.281	ENSAPEG00000001273	yars	100	75.281	Amphiprion_percula
ENSXETG00000027865	yars	100	74.345	ENSATEG00000005301	yars	100	74.345	Anabas_testudineus
ENSXETG00000027865	yars	99	74.432	ENSAPLG00000005739	YARS	99	74.432	Anas_platyrhynchos
ENSXETG00000027865	yars	99	78.937	ENSACAG00000003568	YARS	99	78.937	Anolis_carolinensis
ENSXETG00000027865	yars	100	80.114	ENSANAG00000034533	YARS	100	80.114	Aotus_nancymaae
ENSXETG00000027865	yars	100	73.674	ENSACLG00000004618	yars	100	73.864	Astatotilapia_calliptera
ENSXETG00000027865	yars	100	75.849	ENSAMXG00000010993	yars	100	75.849	Astyanax_mexicanus
ENSXETG00000027865	yars	100	80.871	ENSBTAG00000018065	YARS	100	80.871	Bos_taurus
ENSXETG00000027865	yars	100	79.356	ENSCJAG00000001037	YARS	100	79.356	Callithrix_jacchus
ENSXETG00000027865	yars	100	79.924	ENSCAFG00000010481	YARS	94	79.924	Canis_familiaris
ENSXETG00000027865	yars	100	79.584	ENSCAFG00020025379	YARS	100	79.584	Canis_lupus_dingo
ENSXETG00000027865	yars	100	80.682	ENSCHIG00000014340	YARS	100	80.682	Capra_hircus
ENSXETG00000027865	yars	100	80.303	ENSTSYG00000005019	YARS	100	80.303	Carlito_syrichta
ENSXETG00000027865	yars	90	56.237	ENSCAPG00000008627	YARS	100	56.237	Cavia_aperea
ENSXETG00000027865	yars	100	78.977	ENSCPOG00000009614	YARS	94	78.977	Cavia_porcellus
ENSXETG00000027865	yars	100	79.924	ENSCCAG00000036757	YARS	98	79.924	Cebus_capucinus
ENSXETG00000027865	yars	100	80.114	ENSCATG00000044394	YARS	100	80.114	Cercocebus_atys
ENSXETG00000027865	yars	100	79.735	ENSCLAG00000008977	YARS	93	79.735	Chinchilla_lanigera
ENSXETG00000027865	yars	100	79.924	ENSCSAG00000001062	YARS	100	79.924	Chlorocebus_sabaeus
ENSXETG00000027865	yars	96	69.941	ENSCHOG00000003939	YARS	100	69.941	Choloepus_hoffmanni
ENSXETG00000027865	yars	100	79.545	ENSCPBG00000010998	YARS	100	79.545	Chrysemys_picta_bellii
ENSXETG00000027865	yars	99	68.998	ENSCING00000005113	-	99	69.565	Ciona_intestinalis
ENSXETG00000027865	yars	99	65.537	ENSCSAVG00000003706	-	99	65.779	Ciona_savignyi
ENSXETG00000027865	yars	100	80.114	ENSCANG00000038285	YARS	100	80.114	Colobus_angolensis_palliatus
ENSXETG00000027865	yars	100	79.924	ENSCGRG00001010863	Yars	100	75.568	Cricetulus_griseus_chok1gshd
ENSXETG00000027865	yars	100	79.924	ENSCGRG00000007526	Yars	94	79.924	Cricetulus_griseus_crigri
ENSXETG00000027865	yars	100	72.779	ENSCSEG00000009643	yars	100	72.779	Cynoglossus_semilaevis
ENSXETG00000027865	yars	100	76.226	ENSCVAG00000016583	yars	100	76.226	Cyprinodon_variegatus
ENSXETG00000027865	yars	100	76.938	ENSDARG00000035913	yars	100	86.207	Danio_rerio
ENSXETG00000027865	yars	100	79.167	ENSDNOG00000000536	YARS	100	79.167	Dasypus_novemcinctus
ENSXETG00000027865	yars	100	78.788	ENSDORG00000011871	Yars	100	78.788	Dipodomys_ordii
ENSXETG00000027865	yars	99	65.844	FBgn0027080	TyrRS	99	66.224	Drosophila_melanogaster
ENSXETG00000027865	yars	87	83.333	ENSETEG00000000215	YARS	87	83.333	Echinops_telfairi
ENSXETG00000027865	yars	99	66.983	ENSEBUG00000004750	yars	99	66.983	Eptatretus_burgeri
ENSXETG00000027865	yars	99	78.203	ENSEASG00005011762	YARS	93	78.030	Equus_asinus_asinus
ENSXETG00000027865	yars	99	78.776	ENSECAG00000010015	YARS	68	78.598	Equus_caballus
ENSXETG00000027865	yars	87	63.158	ENSEEUG00000005992	-	87	63.158	Erinaceus_europaeus
ENSXETG00000027865	yars	100	75.189	ENSELUG00000017171	yars	100	75.189	Esox_lucius
ENSXETG00000027865	yars	91	83.936	ENSFCAG00000000704	YARS	100	83.936	Felis_catus
ENSXETG00000027865	yars	98	82.274	ENSFALG00000000592	YARS	92	81.992	Ficedula_albicollis
ENSXETG00000027865	yars	100	79.167	ENSFDAG00000006620	YARS	94	79.167	Fukomys_damarensis
ENSXETG00000027865	yars	100	75.000	ENSFHEG00000022444	yars	100	75.000	Fundulus_heteroclitus
ENSXETG00000027865	yars	96	71.316	ENSGMOG00000006555	yars	100	71.316	Gadus_morhua
ENSXETG00000027865	yars	99	82.567	ENSGALG00000003563	YARS	97	82.567	Gallus_gallus
ENSXETG00000027865	yars	100	73.446	ENSGACG00000008516	yars	100	73.635	Gasterosteus_aculeatus
ENSXETG00000027865	yars	100	79.924	ENSGAGG00000024290	YARS	100	79.924	Gopherus_agassizii
ENSXETG00000027865	yars	100	79.167	ENSGGOG00000014013	YARS	100	79.167	Gorilla_gorilla
ENSXETG00000027865	yars	100	72.897	ENSHBUG00000018909	yars	100	73.271	Haplochromis_burtoni
ENSXETG00000027865	yars	100	78.977	ENSHGLG00000013843	YARS	94	78.977	Heterocephalus_glaber_female
ENSXETG00000027865	yars	100	78.030	ENSHGLG00100002785	-	100	78.030	Heterocephalus_glaber_male
ENSXETG00000027865	yars	70	76.294	ENSHGLG00100020546	-	99	76.294	Heterocephalus_glaber_male
ENSXETG00000027865	yars	100	70.370	ENSHCOG00000006672	yars	100	70.980	Hippocampus_comes
ENSXETG00000027865	yars	99	74.004	ENSIPUG00000021749	yars	99	74.004	Ictalurus_punctatus
ENSXETG00000027865	yars	100	80.303	ENSSTOG00000012031	YARS	94	80.303	Ictidomys_tridecemlineatus
ENSXETG00000027865	yars	100	78.598	ENSJJAG00000013281	Yars	93	78.598	Jaculus_jaculus
ENSXETG00000027865	yars	100	74.812	ENSKMAG00000021752	yars	100	74.812	Kryptolebias_marmoratus
ENSXETG00000027865	yars	100	73.832	ENSLBEG00000024080	yars	100	73.832	Labrus_bergylta
ENSXETG00000027865	yars	100	76.326	ENSLACG00000015577	YARS	100	76.326	Latimeria_chalumnae
ENSXETG00000027865	yars	99	77.989	ENSLOCG00000002165	yars	99	77.989	Lepisosteus_oculatus
ENSXETG00000027865	yars	100	78.598	ENSLAFG00000003786	YARS	96	78.598	Loxodonta_africana
ENSXETG00000027865	yars	100	74.621	ENSMFAG00000040933	YARS	100	74.621	Macaca_fascicularis
ENSXETG00000027865	yars	100	79.924	ENSMMUG00000019746	YARS	100	79.924	Macaca_mulatta
ENSXETG00000027865	yars	100	74.291	ENSMNEG00000031865	YARS	100	74.291	Macaca_nemestrina
ENSXETG00000027865	yars	100	79.924	ENSMLEG00000041315	YARS	100	79.924	Mandrillus_leucophaeus
ENSXETG00000027865	yars	100	73.872	ENSMAMG00000006092	yars	100	73.872	Mastacembelus_armatus
ENSXETG00000027865	yars	100	72.420	ENSMZEG00005011426	yars	100	73.034	Maylandia_zebra
ENSXETG00000027865	yars	99	79.507	ENSMGAG00000005063	YARS	100	79.507	Meleagris_gallopavo
ENSXETG00000027865	yars	97	80.507	ENSMAUG00000021126	Yars	99	80.507	Mesocricetus_auratus
ENSXETG00000027865	yars	100	79.545	ENSMICG00000011204	YARS	100	79.545	Microcebus_murinus
ENSXETG00000027865	yars	100	79.924	ENSMOCG00000011342	Yars	94	79.924	Microtus_ochrogaster
ENSXETG00000027865	yars	100	70.076	ENSMMOG00000021133	yars	100	70.076	Mola_mola
ENSXETG00000027865	yars	100	79.167	ENSMODG00000017404	YARS	100	79.167	Monodelphis_domestica
ENSXETG00000027865	yars	62	81.459	ENSMALG00000003648	yars	90	81.459	Monopterus_albus
ENSXETG00000027865	yars	100	80.303	MGP_CAROLIEiJ_G0026513	Yars	94	80.303	Mus_caroli
ENSXETG00000027865	yars	100	80.114	ENSMUSG00000028811	Yars	94	80.114	Mus_musculus
ENSXETG00000027865	yars	100	80.492	MGP_PahariEiJ_G0028844	Yars	94	80.492	Mus_pahari
ENSXETG00000027865	yars	100	80.114	MGP_SPRETEiJ_G0027493	Yars	94	80.114	Mus_spretus
ENSXETG00000027865	yars	100	80.303	ENSMLUG00000000759	YARS	100	80.303	Myotis_lucifugus
ENSXETG00000027865	yars	98	79.383	ENSNGAG00000001419	Yars	100	80.747	Nannospalax_galili
ENSXETG00000027865	yars	100	73.674	ENSNBRG00000020413	yars	100	73.674	Neolamprologus_brichardi
ENSXETG00000027865	yars	100	79.356	ENSNLEG00000002922	YARS	100	79.356	Nomascus_leucogenys
ENSXETG00000027865	yars	75	79.412	ENSMEUG00000011824	-	75	79.412	Notamacropus_eugenii
ENSXETG00000027865	yars	100	74.621	ENSOPRG00000003669	YARS	100	74.621	Ochotona_princeps
ENSXETG00000027865	yars	100	78.977	ENSODEG00000005363	YARS	94	78.977	Octodon_degus
ENSXETG00000027865	yars	100	73.271	ENSONIG00000015400	yars	100	73.271	Oreochromis_niloticus
ENSXETG00000027865	yars	93	75.600	ENSOANG00000011779	YARS	100	75.600	Ornithorhynchus_anatinus
ENSXETG00000027865	yars	100	80.114	ENSOCUG00000010007	YARS	100	80.114	Oryctolagus_cuniculus
ENSXETG00000027865	yars	98	75.810	ENSORLG00000013982	yars	96	75.810	Oryzias_latipes
ENSXETG00000027865	yars	100	76.460	ENSORLG00020020750	yars	100	76.271	Oryzias_latipes_hni
ENSXETG00000027865	yars	100	75.985	ENSORLG00015008963	yars	100	75.985	Oryzias_latipes_hsok
ENSXETG00000027865	yars	100	76.271	ENSOMEG00000013016	yars	95	86.752	Oryzias_melastigma
ENSXETG00000027865	yars	100	80.114	ENSOGAG00000007359	YARS	100	80.114	Otolemur_garnettii
ENSXETG00000027865	yars	100	80.871	ENSOARG00000020897	YARS	93	80.871	Ovis_aries
ENSXETG00000027865	yars	100	79.545	ENSPPAG00000035791	YARS	99	78.817	Pan_paniscus
ENSXETG00000027865	yars	100	79.735	ENSPPRG00000023768	YARS	100	79.735	Panthera_pardus
ENSXETG00000027865	yars	100	79.735	ENSPTIG00000003438	YARS	100	79.735	Panthera_tigris_altaica
ENSXETG00000027865	yars	100	79.545	ENSPTRG00000000491	YARS	100	79.545	Pan_troglodytes
ENSXETG00000027865	yars	100	80.114	ENSPANG00000009804	YARS	100	80.114	Papio_anubis
ENSXETG00000027865	yars	100	76.894	ENSPKIG00000024596	yars	100	76.894	Paramormyrops_kingsleyae
ENSXETG00000027865	yars	100	69.434	ENSPSIG00000006945	YARS	100	69.434	Pelodiscus_sinensis
ENSXETG00000027865	yars	100	74.242	ENSPMGG00000022917	yars	100	74.242	Periophthalmus_magnuspinnatus
ENSXETG00000027865	yars	100	79.545	ENSPEMG00000010746	Yars	94	79.545	Peromyscus_maniculatus_bairdii
ENSXETG00000027865	yars	99	78.748	ENSPCIG00000022457	YARS	99	78.748	Phascolarctos_cinereus
ENSXETG00000027865	yars	100	73.684	ENSPFOG00000014808	yars	100	74.436	Poecilia_formosa
ENSXETG00000027865	yars	100	73.684	ENSPLAG00000020075	yars	100	74.436	Poecilia_latipinna
ENSXETG00000027865	yars	100	73.684	ENSPMEG00000002803	yars	100	74.436	Poecilia_mexicana
ENSXETG00000027865	yars	100	74.242	ENSPREG00000018280	yars	100	74.242	Poecilia_reticulata
ENSXETG00000027865	yars	100	77.589	ENSPPYG00000001585	YARS	100	77.589	Pongo_abelii
ENSXETG00000027865	yars	76	79.302	ENSPCAG00000011170	YARS	76	79.302	Procavia_capensis
ENSXETG00000027865	yars	100	79.356	ENSPCOG00000021026	YARS	100	79.356	Propithecus_coquereli
ENSXETG00000027865	yars	100	80.114	ENSPVAG00000010984	YARS	100	80.114	Pteropus_vampyrus
ENSXETG00000027865	yars	100	73.485	ENSPNYG00000000860	yars	100	73.674	Pundamilia_nyererei
ENSXETG00000027865	yars	100	75.614	ENSPNAG00000009622	yars	100	75.614	Pygocentrus_nattereri
ENSXETG00000027865	yars	100	79.924	ENSRNOG00000007213	Yars	94	79.924	Rattus_norvegicus
ENSXETG00000027865	yars	55	69.625	ENSRBIG00000044271	-	87	69.625	Rhinopithecus_bieti
ENSXETG00000027865	yars	100	79.924	ENSRROG00000039913	YARS	100	79.924	Rhinopithecus_roxellana
ENSXETG00000027865	yars	100	79.735	ENSSBOG00000030205	YARS	100	79.735	Saimiri_boliviensis_boliviensis
ENSXETG00000027865	yars	100	78.030	ENSSHAG00000011851	YARS	100	78.030	Sarcophilus_harrisii
ENSXETG00000027865	yars	100	76.326	ENSSFOG00015007179	yars	100	76.326	Scleropages_formosus
ENSXETG00000027865	yars	100	72.348	ENSSMAG00000020736	yars	100	72.348	Scophthalmus_maximus
ENSXETG00000027865	yars	100	74.340	ENSSDUG00000001782	yars	100	74.528	Seriola_dumerili
ENSXETG00000027865	yars	100	75.000	ENSSLDG00000008268	yars	100	75.000	Seriola_lalandi_dorsalis
ENSXETG00000027865	yars	85	72.894	ENSSARG00000012227	-	85	72.894	Sorex_araneus
ENSXETG00000027865	yars	100	80.114	ENSSPUG00000000333	YARS	100	80.114	Sphenodon_punctatus
ENSXETG00000027865	yars	100	73.970	ENSSPAG00000020632	yars	100	70.566	Stegastes_partitus
ENSXETG00000027865	yars	100	80.303	ENSSSCG00000030369	YARS	100	80.303	Sus_scrofa
ENSXETG00000027865	yars	99	80.843	ENSTGUG00000001342	YARS	99	80.843	Taeniopygia_guttata
ENSXETG00000027865	yars	99	75.614	ENSTRUG00000014099	yars	99	75.614	Takifugu_rubripes
ENSXETG00000027865	yars	99	74.573	ENSTNIG00000009237	yars	99	74.573	Tetraodon_nigroviridis
ENSXETG00000027865	yars	96	73.870	ENSTBEG00000014374	YARS	100	73.870	Tupaia_belangeri
ENSXETG00000027865	yars	100	79.167	ENSTTRG00000014987	YARS	100	79.167	Tursiops_truncatus
ENSXETG00000027865	yars	100	76.515	ENSUAMG00000000392	YARS	100	73.864	Ursus_americanus
ENSXETG00000027865	yars	100	72.348	ENSUMAG00000008312	YARS	93	72.348	Ursus_maritimus
ENSXETG00000027865	yars	100	69.565	ENSVPAG00000010958	YARS	100	69.565	Vicugna_pacos
ENSXETG00000027865	yars	100	79.924	ENSVVUG00000015468	YARS	99	80.235	Vulpes_vulpes
ENSXETG00000027865	yars	95	74.751	ENSXMAG00000016348	yars	82	74.751	Xiphophorus_maculatus