EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000028019 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 2952 bases
Position: chrGL176768.1:67-3018
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000063868	GTP_EFTU	PF00009.27	3.1e-30	1	1
ENSXETP00000058166	GTP_EFTU	PF00009.27	1.4e-29	1	1
ENSXETP00000058166	GTP_EFTU_D3	PF03143.17	8.5e-21	1	1
ENSXETP00000063868	GTP_EFTU_D3	PF03143.17	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000058166	-	822	-	ENSXETP00000058166	273 (aa)	-	F7C851
ENSXETT00000063162	-	1077	-	ENSXETP00000063868	359 (aa)	-	F7DN32

Gene Model

Click here to download ENSXETG00000028019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000028019's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000028019	-	78	90.426	ENSAPOG00000013385	tufm	84	53.247	Acanthochromis_polyacanthus
ENSXETG00000028019	-	78	90.426	ENSACIG00000007388	tufm	86	53.175	Amphilophus_citrinellus
ENSXETG00000028019	-	78	90.426	ENSAOCG00000001032	tufm	88	52.910	Amphiprion_ocellaris
ENSXETG00000028019	-	78	90.426	ENSAPEG00000015751	tufm	88	52.910	Amphiprion_percula
ENSXETG00000028019	-	78	88.298	ENSATEG00000002905	tufm	81	50.794	Anabas_testudineus
ENSXETG00000028019	-	78	87.234	ENSACAG00000005399	TUFM	81	50.131	Anolis_carolinensis
ENSXETG00000028019	-	78	90.426	ENSACLG00000007403	tufm	78	52.604	Astatotilapia_calliptera
ENSXETG00000028019	-	68	84.043	ENSBTAG00000019216	TUFM	83	48.187	Bos_taurus
ENSXETG00000028019	-	68	84.043	ENSCAFG00000017216	TUFM	83	48.843	Canis_familiaris
ENSXETG00000028019	-	68	84.043	ENSCAFG00020017574	TUFM	83	48.843	Canis_lupus_dingo
ENSXETG00000028019	-	68	84.043	ENSCHIG00000020583	TUFM	83	48.446	Capra_hircus
ENSXETG00000028019	-	78	85.106	ENSTSYG00000026053	TUFM	83	49.096	Carlito_syrichta
ENSXETG00000028019	-	68	84.043	ENSCATG00000035822	TUFM	82	47.927	Cercocebus_atys
ENSXETG00000028019	-	70	85.106	ENSCHOG00000009077	TUFM	83	49.354	Choloepus_hoffmanni
ENSXETG00000028019	-	79	93.617	ENSCPBG00000003874	TUFM	82	52.910	Chrysemys_picta_bellii
ENSXETG00000028019	-	69	77.419	ENSCING00000002841	-	87	38.281	Ciona_intestinalis
ENSXETG00000028019	-	68	85.106	ENSCGRG00001022949	Tufm	83	48.187	Cricetulus_griseus_chok1gshd
ENSXETG00000028019	-	84	63.441	ENSCGRG00000013193	-	53	63.441	Cricetulus_griseus_crigri
ENSXETG00000028019	-	68	85.106	ENSCGRG00000001868	-	83	48.187	Cricetulus_griseus_crigri
ENSXETG00000028019	-	78	89.362	ENSCSEG00000013841	tufm	50	89.362	Cynoglossus_semilaevis
ENSXETG00000028019	-	78	89.362	ENSCVAG00000006251	tufm	88	52.604	Cyprinodon_variegatus
ENSXETG00000028019	-	70	90.426	ENSDARG00000104173	tufm	84	50.794	Danio_rerio
ENSXETG00000028019	-	70	82.979	ENSDNOG00000047636	TUFM	83	47.804	Dasypus_novemcinctus
ENSXETG00000028019	-	66	77.660	FBgn0024556	mEFTu1	74	44.687	Drosophila_melanogaster
ENSXETG00000028019	-	75	87.234	ENSEBUG00000015907	tufm	60	46.753	Eptatretus_burgeri
ENSXETG00000028019	-	77	85.106	ENSEASG00005015477	TUFM	83	48.705	Equus_asinus_asinus
ENSXETG00000028019	-	77	85.106	ENSECAG00000019763	TUFM	83	48.705	Equus_caballus
ENSXETG00000028019	-	78	91.489	ENSELUG00000013410	tufm	80	53.826	Esox_lucius
ENSXETG00000028019	-	73	86.170	ENSFDAG00000010881	TUFM	51	86.170	Fukomys_damarensis
ENSXETG00000028019	-	78	90.426	ENSFHEG00000020646	tufm	50	90.426	Fundulus_heteroclitus
ENSXETG00000028019	-	78	92.553	ENSGMOG00000014616	tufm	84	53.439	Gadus_morhua
ENSXETG00000028019	-	78	90.426	ENSGAFG00000004682	tufm	88	53.826	Gambusia_affinis
ENSXETG00000028019	-	78	91.489	ENSGACG00000012961	tufm	84	52.895	Gasterosteus_aculeatus
ENSXETG00000028019	-	79	92.553	ENSGAGG00000006132	TUFM	53	92.553	Gopherus_agassizii
ENSXETG00000028019	-	78	90.426	ENSHBUG00000019031	tufm	81	52.910	Haplochromis_burtoni
ENSXETG00000028019	-	78	90.426	ENSHCOG00000014418	tufm	86	52.480	Hippocampus_comes
ENSXETG00000028019	-	70	90.426	ENSIPUG00000022457	tufm	84	52.910	Ictalurus_punctatus
ENSXETG00000028019	-	92	40.541	ENSIPUG00000020682	-	64	40.541	Ictalurus_punctatus
ENSXETG00000028019	-	68	85.106	ENSSTOG00000011837	TUFM	83	48.964	Ictidomys_tridecemlineatus
ENSXETG00000028019	-	70	91.489	ENSKMAG00000009794	tufm	84	53.439	Kryptolebias_marmoratus
ENSXETG00000028019	-	78	90.426	ENSLBEG00000023735	tufm	50	90.426	Labrus_bergylta
ENSXETG00000028019	-	78	89.362	ENSLACG00000008242	TUFM	83	51.031	Latimeria_chalumnae
ENSXETG00000028019	-	70	84.043	ENSMFAG00000033739	TUFM	83	48.062	Macaca_fascicularis
ENSXETG00000028019	-	70	84.043	ENSMMUG00000003303	TUFM	83	48.062	Macaca_mulatta
ENSXETG00000028019	-	70	84.043	ENSMNEG00000006031	TUFM	83	48.062	Macaca_nemestrina
ENSXETG00000028019	-	68	84.043	ENSMLEG00000042133	TUFM	82	47.927	Mandrillus_leucophaeus
ENSXETG00000028019	-	78	89.362	ENSMAMG00000002053	tufm	84	52.910	Mastacembelus_armatus
ENSXETG00000028019	-	78	90.426	ENSMZEG00005010857	tufm	78	52.604	Maylandia_zebra
ENSXETG00000028019	-	68	85.106	ENSMAUG00000010490	Tufm	83	48.446	Mesocricetus_auratus
ENSXETG00000028019	-	68	84.043	ENSMOCG00000010051	Tufm	83	48.187	Microtus_ochrogaster
ENSXETG00000028019	-	78	78.723	ENSMMOG00000012344	tufm	83	50.390	Mola_mola
ENSXETG00000028019	-	78	87.234	ENSMALG00000020254	tufm	84	50.518	Monopterus_albus
ENSXETG00000028019	-	68	85.106	MGP_CAROLIEiJ_G0030448	-	83	48.187	Mus_caroli
ENSXETG00000028019	-	68	85.106	MGP_CAROLIEiJ_G0030449	-	83	48.187	Mus_caroli
ENSXETG00000028019	-	68	85.106	ENSMUSG00000073838	Tufm	83	48.446	Mus_musculus
ENSXETG00000028019	-	68	85.106	MGP_PahariEiJ_G0013659	-	83	48.446	Mus_pahari
ENSXETG00000028019	-	68	85.106	MGP_PahariEiJ_G0013658	-	83	48.446	Mus_pahari
ENSXETG00000028019	-	68	85.106	MGP_SPRETEiJ_G0031562	-	83	48.446	Mus_spretus
ENSXETG00000028019	-	74	84.884	ENSMPUG00000012816	TUFM	98	48.556	Mustela_putorius_furo
ENSXETG00000028019	-	68	85.106	ENSMLUG00000012335	-	83	47.570	Myotis_lucifugus
ENSXETG00000028019	-	75	91.667	ENSNBRG00000006466	tufm	96	52.603	Neolamprologus_brichardi
ENSXETG00000028019	-	53	85.106	ENSMEUG00000011131	TUFM	88	43.168	Notamacropus_eugenii
ENSXETG00000028019	-	83	42.813	ENSOPRG00000002318	-	69	42.813	Ochotona_princeps
ENSXETG00000028019	-	78	90.426	ENSONIG00000019389	tufm	84	52.865	Oreochromis_niloticus
ENSXETG00000028019	-	70	84.043	ENSOANG00000013114	TUFM	86	47.704	Ornithorhynchus_anatinus
ENSXETG00000028019	-	77	84.043	ENSOCUG00000002683	TUFM	82	48.446	Oryctolagus_cuniculus
ENSXETG00000028019	-	78	88.298	ENSORLG00000011497	tufm	84	52.910	Oryzias_latipes
ENSXETG00000028019	-	78	89.362	ENSORLG00020013437	tufm	84	53.439	Oryzias_latipes_hni
ENSXETG00000028019	-	78	89.362	ENSORLG00015003107	tufm	84	53.175	Oryzias_latipes_hsok
ENSXETG00000028019	-	78	89.362	ENSOMEG00000016958	tufm	84	52.646	Oryzias_melastigma
ENSXETG00000028019	-	77	84.043	ENSOARG00000002357	TUFM	91	48.446	Ovis_aries
ENSXETG00000028019	-	77	84.043	ENSPPRG00000014248	TUFM	82	48.446	Panthera_pardus
ENSXETG00000028019	-	77	84.043	ENSPTIG00000009980	TUFM	88	48.446	Panthera_tigris_altaica
ENSXETG00000028019	-	70	84.043	ENSPANG00000019624	TUFM	83	47.804	Papio_anubis
ENSXETG00000028019	-	78	89.362	ENSPKIG00000023809	tufm	82	51.813	Paramormyrops_kingsleyae
ENSXETG00000028019	-	58	86.486	ENSPSIG00000005302	TUFM	100	45.171	Pelodiscus_sinensis
ENSXETG00000028019	-	78	89.362	ENSPMGG00000015631	tufm	89	51.554	Periophthalmus_magnuspinnatus
ENSXETG00000028019	-	68	85.106	ENSPEMG00000012208	Tufm	83	47.927	Peromyscus_maniculatus_bairdii
ENSXETG00000028019	-	78	88.298	ENSPFOG00000007043	tufm	84	51.169	Poecilia_formosa
ENSXETG00000028019	-	78	88.298	ENSPLAG00000014372	tufm	84	51.169	Poecilia_latipinna
ENSXETG00000028019	-	78	88.298	ENSPMEG00000014520	-	64	89.041	Poecilia_mexicana
ENSXETG00000028019	-	78	88.298	ENSPMEG00000019508	tufm	84	51.715	Poecilia_mexicana
ENSXETG00000028019	-	78	88.298	ENSPREG00000013913	tufm	84	51.587	Poecilia_reticulata
ENSXETG00000028019	-	78	90.426	ENSPNYG00000008905	tufm	84	52.094	Pundamilia_nyererei
ENSXETG00000028019	-	78	91.489	ENSPNAG00000018881	tufm	84	52.910	Pygocentrus_nattereri
ENSXETG00000028019	-	68	85.106	ENSRNOG00000018604	Tufm	83	48.446	Rattus_norvegicus
ENSXETG00000028019	-	67	35.357	ENSRBIG00000036713	-	94	35.357	Rhinopithecus_bieti
ENSXETG00000028019	-	64	84.043	ENSRBIG00000042008	-	80	45.822	Rhinopithecus_bieti
ENSXETG00000028019	-	70	84.043	ENSRROG00000036858	-	83	48.320	Rhinopithecus_roxellana
ENSXETG00000028019	-	77	85.106	ENSSHAG00000012121	TUFM	87	47.692	Sarcophilus_harrisii
ENSXETG00000028019	-	78	86.170	ENSSFOG00015013352	tufm	84	50.909	Scleropages_formosus
ENSXETG00000028019	-	78	89.362	ENSSMAG00000010053	tufm	84	52.468	Scophthalmus_maximus
ENSXETG00000028019	-	78	90.426	ENSSDUG00000016896	tufm	84	53.704	Seriola_dumerili
ENSXETG00000028019	-	78	90.426	ENSSLDG00000006494	tufm	85	53.704	Seriola_lalandi_dorsalis
ENSXETG00000028019	-	79	89.362	ENSSPAG00000009936	tufm	50	89.362	Stegastes_partitus
ENSXETG00000028019	-	78	91.489	ENSTRUG00000008300	tufm	84	52.713	Takifugu_rubripes
ENSXETG00000028019	-	67	35.897	ENSTTRG00000005930	-	57	35.897	Tursiops_truncatus
ENSXETG00000028019	-	68	84.043	ENSVVUG00000024170	TUFM	83	48.843	Vulpes_vulpes
ENSXETG00000028019	-	78	90.426	ENSXMAG00000011848	tufm	86	53.247	Xiphophorus_maculatus