EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000030239 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 4551 bases
Position: chrGL172899.1:202598-207148
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060362	Fcf2	PF08698.11	1.6e-29	1	1
ENSXETP00000013480	Fcf2	PF08698.11	1.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000013480	-	720	-	ENSXETP00000013480	239 (aa)	-	F7CGK9
ENSXETT00000061846	-	942	-	ENSXETP00000060362	313 (aa)	-	F6W514

Gene Model

Click here to download ENSXETG00000030239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000030239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000030239	-	79	57.895	ENSACIG00000004083	-	94	59.162	Amphilophus_citrinellus
ENSXETG00000030239	-	79	59.043	ENSAMXG00000037295	-	50	59.788	Astyanax_mexicanus
ENSXETG00000030239	-	57	38.235	WBGene00021715	Y49F6B.2	56	38.462	Caenorhabditis_elegans
ENSXETG00000030239	-	88	58.879	ENSCAFG00020015222	-	77	51.613	Canis_lupus_dingo
ENSXETG00000030239	-	95	38.608	ENSCATG00000034830	-	80	37.342	Cercocebus_atys
ENSXETG00000030239	-	88	57.346	ENSDNOG00000037246	-	83	50.000	Dasypus_novemcinctus
ENSXETG00000030239	-	74	46.369	ENSGMOG00000006647	-	89	43.277	Gadus_morhua
ENSXETG00000030239	-	84	51.707	ENSGACG00000011176	-	88	47.287	Gasterosteus_aculeatus
ENSXETG00000030239	-	85	59.606	ENSLOCG00000009635	dnttip2	73	55.133	Lepisosteus_oculatus
ENSXETG00000030239	-	95	47.785	ENSMFAG00000001524	-	82	47.468	Macaca_fascicularis
ENSXETG00000030239	-	95	47.785	ENSMMUG00000044566	-	82	47.152	Macaca_mulatta
ENSXETG00000030239	-	95	49.355	ENSMNEG00000033887	-	85	48.875	Macaca_nemestrina
ENSXETG00000030239	-	95	44.444	ENSMLEG00000030091	-	81	43.987	Mandrillus_leucophaeus
ENSXETG00000030239	-	79	54.737	ENSMMOG00000020274	-	91	55.851	Mola_mola
ENSXETG00000030239	-	80	58.854	ENSMLUG00000027985	-	95	58.854	Myotis_lucifugus
ENSXETG00000030239	-	51	62.602	ENSNBRG00000000550	-	100	63.415	Neolamprologus_brichardi
ENSXETG00000030239	-	75	56.111	ENSNBRG00000023794	-	92	56.667	Neolamprologus_brichardi
ENSXETG00000030239	-	79	58.730	ENSONIG00000002356	dnttip2	50	46.815	Oreochromis_niloticus
ENSXETG00000030239	-	80	59.896	ENSOANG00000013678	-	73	59.896	Ornithorhynchus_anatinus
ENSXETG00000030239	-	79	54.737	ENSORLG00020014450	-	92	57.447	Oryzias_latipes_hni
ENSXETG00000030239	-	75	55.866	ENSORLG00015010304	-	92	57.447	Oryzias_latipes_hsok
ENSXETG00000030239	-	96	48.882	ENSPANG00000032408	-	83	48.553	Papio_anubis
ENSXETG00000030239	-	82	61.224	ENSPKIG00000006816	-	91	61.579	Paramormyrops_kingsleyae
ENSXETG00000030239	-	83	56.000	ENSPMGG00000022195	-	92	57.672	Periophthalmus_magnuspinnatus
ENSXETG00000030239	-	79	55.497	ENSSDUG00000000039	-	94	56.021	Seriola_dumerili
ENSXETG00000030239	-	71	57.396	ENSSPAG00000016698	-	90	57.988	Stegastes_partitus
ENSXETG00000030239	-	84	62.500	ENSTGUG00000005876	-	86	56.154	Taeniopygia_guttata
ENSXETG00000030239	-	81	55.959	ENSTRUG00000000733	-	92	54.639	Takifugu_rubripes
ENSXETG00000030239	-	86	55.825	ENSTNIG00000000907	-	84	56.281	Tetraodon_nigroviridis
ENSXETG00000030239	-	84	55.000	ENSXCOG00000010758	-	94	57.672	Xiphophorus_couchianus