EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000030249 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 4085 bases
Position: chrGL173026.1:44938-49022
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000062442	zf-C2H2	PF00096.26	1.5e-37	1	6
ENSXETP00000062442	zf-C2H2	PF00096.26	1.5e-37	2	6
ENSXETP00000062442	zf-C2H2	PF00096.26	1.5e-37	3	6
ENSXETP00000062442	zf-C2H2	PF00096.26	1.5e-37	4	6
ENSXETP00000062442	zf-C2H2	PF00096.26	1.5e-37	5	6
ENSXETP00000062442	zf-C2H2	PF00096.26	1.5e-37	6	6
ENSXETP00000062442	zf-met	PF12874.7	9.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000066265	-	975	-	ENSXETP00000062442	325 (aa)	-	F7A510

Gene Model

Click here to download ENSXETG00000030249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000030249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000030249	-	51	38.406	ENSXETG00000033098	ZNF366	50	37.423
ENSXETG00000030249	-	56	39.779	ENSXETG00000001980	znf408	75	39.779
ENSXETG00000030249	-	52	51.220	ENSXETG00000010512	-	99	51.220
ENSXETG00000030249	-	63	50.307	ENSXETG00000027149	-	99	50.307
ENSXETG00000030249	-	51	57.831	ENSXETG00000030967	-	94	57.831
ENSXETG00000030249	-	51	51.852	ENSXETG00000032038	-	93	51.852
ENSXETG00000030249	-	51	53.012	ENSXETG00000013882	-	100	53.012
ENSXETG00000030249	-	57	56.250	ENSXETG00000023597	-	100	56.250
ENSXETG00000030249	-	54	51.497	ENSXETG00000002717	-	99	51.497
ENSXETG00000030249	-	100	51.807	ENSXETG00000002690	-	91	51.807
ENSXETG00000030249	-	57	52.410	ENSXETG00000017175	-	100	52.410
ENSXETG00000030249	-	58	51.408	ENSXETG00000024118	-	99	51.408
ENSXETG00000030249	-	58	49.080	ENSXETG00000027484	znf432	63	49.080
ENSXETG00000030249	-	50	39.552	ENSXETG00000024006	snai2	50	39.552
ENSXETG00000030249	-	56	48.795	ENSXETG00000034213	-	98	50.909
ENSXETG00000030249	-	52	44.348	ENSXETG00000006263	gfi1b	52	44.348
ENSXETG00000030249	-	75	35.897	ENSXETG00000024897	ovol2	77	35.897
ENSXETG00000030249	-	54	48.193	ENSXETG00000001911	znf668	94	48.193
ENSXETG00000030249	-	58	36.994	ENSXETG00000001910	znf646	99	42.553
ENSXETG00000030249	-	56	54.217	ENSXETG00000016781	-	99	54.217
ENSXETG00000030249	-	54	47.853	ENSXETG00000031192	-	100	47.853
ENSXETG00000030249	-	51	50.602	ENSXETG00000033508	-	66	50.602
ENSXETG00000030249	-	58	49.693	ENSXETG00000016062	znf184	93	49.693
ENSXETG00000030249	-	57	47.977	ENSXETG00000012506	znf91	100	47.977
ENSXETG00000030249	-	51	49.701	ENSXETG00000031310	-	63	46.707
ENSXETG00000030249	-	80	44.231	ENSXETG00000016091	e4f1	58	39.456
ENSXETG00000030249	-	54	47.222	ENSXETG00000015125	-	97	47.222
ENSXETG00000030249	-	56	48.592	ENSXETG00000030307	-	100	48.592
ENSXETG00000030249	-	85	43.976	ENSXETG00000013744	znf319	95	43.976
ENSXETG00000030249	-	97	56.024	ENSXETG00000006575	znf420	97	57.627
ENSXETG00000030249	-	50	47.297	ENSXETG00000027366	snai1	61	36.792
ENSXETG00000030249	-	52	51.205	ENSXETG00000006490	znf350	93	51.205
ENSXETG00000030249	-	52	42.331	ENSXETG00000027536	znf574	61	42.331
ENSXETG00000030249	-	59	49.398	ENSXETG00000008801	znf628	95	49.398
ENSXETG00000030249	-	51	53.793	ENSXETG00000031460	-	87	53.793
ENSXETG00000030249	-	51	50.932	ENSXETG00000025282	-	99	50.932
ENSXETG00000030249	-	57	47.581	ENSXETG00000002101	prdm5	79	47.581
ENSXETG00000030249	-	58	50.000	ENSXETG00000026673	-	91	50.000
ENSXETG00000030249	-	57	55.862	ENSXETG00000023643	znf484	97	55.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000030249	-	51	45.963	ENSATEG00000009436	-	83	45.963	Anabas_testudineus
ENSXETG00000030249	-	51	42.105	ENSCVAG00000019519	-	83	42.105	Cyprinodon_variegatus
ENSXETG00000030249	-	92	41.176	ENSCVAG00000004222	-	79	41.176	Cyprinodon_variegatus
ENSXETG00000030249	-	54	45.833	ENSELUG00000009654	-	71	40.964	Esox_lucius
ENSXETG00000030249	-	68	42.748	ENSGAFG00000004319	-	56	38.462	Gambusia_affinis
ENSXETG00000030249	-	55	42.202	ENSHCOG00000002898	-	53	42.202	Hippocampus_comes
ENSXETG00000030249	-	51	44.099	ENSKMAG00000011850	-	53	44.099	Kryptolebias_marmoratus
ENSXETG00000030249	-	62	43.636	ENSLBEG00000011986	-	96	43.636	Labrus_bergylta
ENSXETG00000030249	-	51	45.963	ENSONIG00000008984	-	96	45.963	Oreochromis_niloticus
ENSXETG00000030249	-	51	47.222	ENSORLG00000016243	-	74	47.222	Oryzias_latipes
ENSXETG00000030249	-	51	46.296	ENSORLG00015002548	-	66	46.296	Oryzias_latipes_hsok
ENSXETG00000030249	-	51	42.857	ENSPFOG00000018462	-	95	42.857	Poecilia_formosa
ENSXETG00000030249	-	59	52.941	ENSSFOG00015008577	-	98	50.303	Scleropages_formosus
ENSXETG00000030249	-	55	44.242	ENSSMAG00000000056	-	52	44.242	Scophthalmus_maximus
ENSXETG00000030249	-	51	43.030	ENSTRUG00000005880	-	52	43.030	Takifugu_rubripes