EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000030343 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 2047 bases
Position: chrGL173052.1:455559-457605
Accession: 20495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060929	RRM_1	PF00076.22	5.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064517	SLIRP-201	267	-	ENSXETP00000060929	89 (aa)	-	F6YCC4

Gene Model

Click here to download ENSXETG00000030343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000030343's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000030343	SLIRP	92	30.769	ENSXETG00000003836	hnrnpab	50	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000030343	SLIRP	80	63.380	ENSG00000119705	SLIRP	92	62.857	Homo_sapiens
ENSXETG00000030343	SLIRP	91	69.136	ENSAPOG00000001298	slirp	81	69.136	Acanthochromis_polyacanthus
ENSXETG00000030343	SLIRP	79	58.571	ENSAMEG00000003975	SLIRP	77	58.571	Ailuropoda_melanoleuca
ENSXETG00000030343	SLIRP	89	73.418	ENSACIG00000023083	slirp	78	73.418	Amphilophus_citrinellus
ENSXETG00000030343	SLIRP	89	69.620	ENSAOCG00000006342	slirp	80	69.620	Amphiprion_ocellaris
ENSXETG00000030343	SLIRP	89	69.620	ENSAPEG00000015917	slirp	80	69.620	Amphiprion_percula
ENSXETG00000030343	SLIRP	89	69.620	ENSAPEG00000015719	-	81	69.620	Amphiprion_percula
ENSXETG00000030343	SLIRP	91	74.074	ENSATEG00000013525	slirp	81	74.074	Anabas_testudineus
ENSXETG00000030343	SLIRP	91	60.494	ENSAMXG00000018693	slirp	81	60.494	Astyanax_mexicanus
ENSXETG00000030343	SLIRP	79	58.571	ENSCJAG00000016946	SLIRP	72	59.701	Callithrix_jacchus
ENSXETG00000030343	SLIRP	79	60.000	ENSCAFG00020015876	-	63	60.000	Canis_lupus_dingo
ENSXETG00000030343	SLIRP	80	57.746	ENSCCAG00000030130	SLIRP	65	58.571	Cebus_capucinus
ENSXETG00000030343	SLIRP	79	62.857	ENSCATG00000036327	SLIRP	72	62.687	Cercocebus_atys
ENSXETG00000030343	SLIRP	79	62.857	ENSCSAG00000011736	SLIRP	64	62.857	Chlorocebus_sabaeus
ENSXETG00000030343	SLIRP	92	60.976	ENSCPBG00000026327	SLIRP	83	60.976	Chrysemys_picta_bellii
ENSXETG00000030343	SLIRP	75	65.672	ENSCANG00000032892	SLIRP	68	65.672	Colobus_angolensis_palliatus
ENSXETG00000030343	SLIRP	91	53.659	ENSCGRG00001024068	Slirp	74	53.659	Cricetulus_griseus_chok1gshd
ENSXETG00000030343	SLIRP	91	53.659	ENSCGRG00000017440	Slirp	74	53.659	Cricetulus_griseus_crigri
ENSXETG00000030343	SLIRP	91	55.556	ENSCSEG00000015766	slirp	82	55.556	Cynoglossus_semilaevis
ENSXETG00000030343	SLIRP	90	75.000	ENSCVAG00000012504	slirp	79	75.000	Cyprinodon_variegatus
ENSXETG00000030343	SLIRP	87	71.429	ENSDARG00000097753	slirp	78	71.250	Danio_rerio
ENSXETG00000030343	SLIRP	88	46.154	ENSDNOG00000007721	SLIRP	71	46.154	Dasypus_novemcinctus
ENSXETG00000030343	SLIRP	80	50.704	ENSDORG00000012379	Slirp	64	50.704	Dipodomys_ordii
ENSXETG00000030343	SLIRP	80	52.113	ENSETEG00000010345	SLIRP	66	52.113	Echinops_telfairi
ENSXETG00000030343	SLIRP	79	58.571	ENSEASG00005020193	SLIRP	63	58.571	Equus_asinus_asinus
ENSXETG00000030343	SLIRP	81	51.389	ENSEEUG00000007257	SLIRP	71	51.389	Erinaceus_europaeus
ENSXETG00000030343	SLIRP	91	71.605	ENSELUG00000016800	slirp	80	71.605	Esox_lucius
ENSXETG00000030343	SLIRP	75	59.701	ENSFCAG00000036326	SLIRP	68	59.701	Felis_catus
ENSXETG00000030343	SLIRP	84	60.000	ENSFALG00000012583	SLIRP	71	60.000	Ficedula_albicollis
ENSXETG00000030343	SLIRP	79	57.143	ENSFDAG00000008347	SLIRP	62	57.143	Fukomys_damarensis
ENSXETG00000030343	SLIRP	69	68.852	ENSFHEG00000004709	slirp	66	68.852	Fundulus_heteroclitus
ENSXETG00000030343	SLIRP	90	70.000	ENSGMOG00000016948	slirp	77	70.000	Gadus_morhua
ENSXETG00000030343	SLIRP	84	61.333	ENSGALG00000031238	SLIRP	78	62.162	Gallus_gallus
ENSXETG00000030343	SLIRP	91	66.667	ENSGAFG00000010998	slirp	81	66.667	Gambusia_affinis
ENSXETG00000030343	SLIRP	92	71.951	ENSGACG00000020137	slirp	95	71.951	Gasterosteus_aculeatus
ENSXETG00000030343	SLIRP	94	59.524	ENSGAGG00000009953	SLIRP	58	59.524	Gopherus_agassizii
ENSXETG00000030343	SLIRP	80	63.380	ENSGGOG00000011059	-	73	63.235	Gorilla_gorilla
ENSXETG00000030343	SLIRP	79	52.857	ENSHGLG00000018491	SLIRP	63	52.857	Heterocephalus_glaber_female
ENSXETG00000030343	SLIRP	79	52.857	ENSHGLG00100014153	SLIRP	63	52.857	Heterocephalus_glaber_male
ENSXETG00000030343	SLIRP	91	71.605	ENSHCOG00000006795	slirp	82	71.605	Hippocampus_comes
ENSXETG00000030343	SLIRP	91	71.605	ENSIPUG00000010214	SLIRP	81	71.605	Ictalurus_punctatus
ENSXETG00000030343	SLIRP	80	57.746	ENSSTOG00000034316	SLIRP	64	57.746	Ictidomys_tridecemlineatus
ENSXETG00000030343	SLIRP	91	62.963	ENSKMAG00000002038	slirp	78	62.963	Kryptolebias_marmoratus
ENSXETG00000030343	SLIRP	91	61.728	ENSLBEG00000007564	slirp	81	61.728	Labrus_bergylta
ENSXETG00000030343	SLIRP	91	81.481	ENSLACG00000013434	SLIRP	78	81.481	Latimeria_chalumnae
ENSXETG00000030343	SLIRP	79	62.857	ENSMFAG00000042960	SLIRP	72	62.687	Macaca_fascicularis
ENSXETG00000030343	SLIRP	79	62.857	ENSMMUG00000029256	SLIRP	72	62.687	Macaca_mulatta
ENSXETG00000030343	SLIRP	79	62.857	ENSMNEG00000028921	SLIRP	72	62.687	Macaca_nemestrina
ENSXETG00000030343	SLIRP	75	62.687	ENSMLEG00000043644	SLIRP	68	62.687	Mandrillus_leucophaeus
ENSXETG00000030343	SLIRP	89	75.949	ENSMZEG00005004617	slirp	80	75.949	Maylandia_zebra
ENSXETG00000030343	SLIRP	79	58.571	ENSMAUG00000003857	Slirp	63	58.571	Mesocricetus_auratus
ENSXETG00000030343	SLIRP	79	55.714	ENSMICG00000012080	SLIRP	65	55.714	Microcebus_murinus
ENSXETG00000030343	SLIRP	79	60.000	ENSMOCG00000016019	Slirp	69	60.000	Microtus_ochrogaster
ENSXETG00000030343	SLIRP	91	72.840	ENSMMOG00000018268	slirp	81	72.840	Mola_mola
ENSXETG00000030343	SLIRP	79	60.000	ENSMODG00000005207	-	99	60.000	Monodelphis_domestica
ENSXETG00000030343	SLIRP	91	71.605	ENSMALG00000012581	slirp	83	71.605	Monopterus_albus
ENSXETG00000030343	SLIRP	80	56.338	MGP_CAROLIEiJ_G0017995	Slirp	66	56.338	Mus_caroli
ENSXETG00000030343	SLIRP	80	56.338	ENSMUSG00000021040	Slirp	71	57.143	Mus_musculus
ENSXETG00000030343	SLIRP	80	56.338	MGP_SPRETEiJ_G0018840	Slirp	63	56.338	Mus_spretus
ENSXETG00000030343	SLIRP	79	57.143	ENSMLUG00000029544	-	78	51.724	Myotis_lucifugus
ENSXETG00000030343	SLIRP	78	56.522	ENSMLUG00000024998	-	62	56.522	Myotis_lucifugus
ENSXETG00000030343	SLIRP	79	54.286	ENSNGAG00000016363	Slirp	67	54.286	Nannospalax_galili
ENSXETG00000030343	SLIRP	81	55.556	ENSNLEG00000027238	-	80	55.714	Nomascus_leucogenys
ENSXETG00000030343	SLIRP	81	55.556	ENSNLEG00000032459	-	73	57.353	Nomascus_leucogenys
ENSXETG00000030343	SLIRP	79	60.000	ENSODEG00000012580	SLIRP	76	60.000	Octodon_degus
ENSXETG00000030343	SLIRP	89	75.949	ENSONIG00000011692	slirp	80	75.949	Oreochromis_niloticus
ENSXETG00000030343	SLIRP	80	66.197	ENSOANG00000022366	SLIRP	64	66.197	Ornithorhynchus_anatinus
ENSXETG00000030343	SLIRP	93	69.880	ENSORLG00000010761	slirp	64	69.880	Oryzias_latipes
ENSXETG00000030343	SLIRP	91	70.370	ENSORLG00020022188	slirp	81	70.370	Oryzias_latipes_hni
ENSXETG00000030343	SLIRP	90	70.000	ENSORLG00015020171	slirp	79	70.000	Oryzias_latipes_hsok
ENSXETG00000030343	SLIRP	91	71.605	ENSOMEG00000019321	slirp	81	71.605	Oryzias_melastigma
ENSXETG00000030343	SLIRP	80	63.380	ENSPPAG00000040710	-	73	63.235	Pan_paniscus
ENSXETG00000030343	SLIRP	75	59.701	ENSPPRG00000014350	SLIRP	68	59.701	Panthera_pardus
ENSXETG00000030343	SLIRP	75	59.701	ENSPTIG00000014196	SLIRP	68	59.701	Panthera_tigris_altaica
ENSXETG00000030343	SLIRP	80	63.380	ENSPTRG00000030691	SLIRP	73	63.235	Pan_troglodytes
ENSXETG00000030343	SLIRP	79	64.286	ENSPANG00000026323	SLIRP	72	64.179	Papio_anubis
ENSXETG00000030343	SLIRP	67	65.000	ENSPKIG00000008831	slirp	59	65.000	Paramormyrops_kingsleyae
ENSXETG00000030343	SLIRP	90	80.000	ENSPMGG00000010541	slirp	92	80.000	Periophthalmus_magnuspinnatus
ENSXETG00000030343	SLIRP	79	55.714	ENSPEMG00000013234	Slirp	69	55.714	Peromyscus_maniculatus_bairdii
ENSXETG00000030343	SLIRP	91	50.617	ENSPMAG00000009355	slirp	90	50.617	Petromyzon_marinus
ENSXETG00000030343	SLIRP	79	57.143	ENSPCIG00000026842	-	75	57.143	Phascolarctos_cinereus
ENSXETG00000030343	SLIRP	91	67.901	ENSPFOG00000006758	slirp	81	67.901	Poecilia_formosa
ENSXETG00000030343	SLIRP	91	67.901	ENSPLAG00000011140	slirp	81	67.901	Poecilia_latipinna
ENSXETG00000030343	SLIRP	91	67.901	ENSPMEG00000019535	slirp	81	67.901	Poecilia_mexicana
ENSXETG00000030343	SLIRP	91	67.901	ENSPREG00000011673	slirp	81	67.901	Poecilia_reticulata
ENSXETG00000030343	SLIRP	79	65.714	ENSPPYG00000006030	SLIRP	64	65.714	Pongo_abelii
ENSXETG00000030343	SLIRP	79	54.286	ENSPCOG00000015159	SLIRP	65	54.286	Propithecus_coquereli
ENSXETG00000030343	SLIRP	91	76.543	ENSPNAG00000008633	slirp	82	76.543	Pygocentrus_nattereri
ENSXETG00000030343	SLIRP	75	62.687	ENSRBIG00000032998	-	62	62.687	Rhinopithecus_bieti
ENSXETG00000030343	SLIRP	80	60.563	ENSRBIG00000031396	-	71	60.563	Rhinopithecus_bieti
ENSXETG00000030343	SLIRP	79	64.286	ENSRBIG00000032222	-	72	64.179	Rhinopithecus_bieti
ENSXETG00000030343	SLIRP	79	60.000	ENSRBIG00000035817	-	64	60.000	Rhinopithecus_bieti
ENSXETG00000030343	SLIRP	75	64.179	ENSRROG00000017133	-	70	64.179	Rhinopithecus_roxellana
ENSXETG00000030343	SLIRP	79	64.286	ENSRROG00000036656	-	72	64.179	Rhinopithecus_roxellana
ENSXETG00000030343	SLIRP	79	64.286	ENSRROG00000041312	-	69	64.286	Rhinopithecus_roxellana
ENSXETG00000030343	SLIRP	80	61.972	ENSRROG00000035604	-	71	61.972	Rhinopithecus_roxellana
ENSXETG00000030343	SLIRP	81	56.944	ENSSBOG00000020014	SLIRP	72	61.194	Saimiri_boliviensis_boliviensis
ENSXETG00000030343	SLIRP	91	62.963	ENSSFOG00015011165	slirp	82	62.963	Scleropages_formosus
ENSXETG00000030343	SLIRP	91	51.852	ENSSMAG00000012930	slirp	79	51.852	Scophthalmus_maximus
ENSXETG00000030343	SLIRP	92	73.171	ENSSDUG00000021883	slirp	54	73.171	Seriola_dumerili
ENSXETG00000030343	SLIRP	92	73.171	ENSSLDG00000023136	slirp	75	73.171	Seriola_lalandi_dorsalis
ENSXETG00000030343	SLIRP	91	69.412	ENSSPUG00000009346	SLIRP	87	69.412	Sphenodon_punctatus
ENSXETG00000030343	SLIRP	92	62.195	ENSSPAG00000013477	slirp	82	62.195	Stegastes_partitus
ENSXETG00000030343	SLIRP	79	55.714	ENSSSCG00000028167	SLIRP	63	55.714	Sus_scrofa
ENSXETG00000030343	SLIRP	87	59.740	ENSTGUG00000012337	SLIRP	73	59.740	Taeniopygia_guttata
ENSXETG00000030343	SLIRP	91	74.390	ENSTRUG00000020127	slirp	81	73.171	Takifugu_rubripes
ENSXETG00000030343	SLIRP	79	58.571	ENSUAMG00000022445	SLIRP	63	58.571	Ursus_americanus
ENSXETG00000030343	SLIRP	79	58.571	ENSUMAG00000007166	SLIRP	63	58.571	Ursus_maritimus
ENSXETG00000030343	SLIRP	80	54.930	ENSVPAG00000001781	SLIRP	66	54.930	Vicugna_pacos
ENSXETG00000030343	SLIRP	80	59.155	ENSVVUG00000004436	SLIRP	64	57.746	Vulpes_vulpes
ENSXETG00000030343	SLIRP	91	67.901	ENSXCOG00000009422	slirp	81	67.901	Xiphophorus_couchianus
ENSXETG00000030343	SLIRP	91	69.136	ENSXMAG00000015655	slirp	81	69.136	Xiphophorus_maculatus