EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000030345 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH3
Alias: FLJ12455|GPATC3
Full Name: G-patch domain containing 3
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 14139 bases
Position: chrGL172742.1:2023059-2037197
Accession: 25720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000059216	G-patch	PF01585.23	4.2e-08	1	1
ENSXETP00000058964	G-patch	PF01585.23	4.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000061090	GPATCH3-202	1374	-	ENSXETP00000059216	458 (aa)	-	F6UMI1
ENSXETT00000060893	GPATCH3-201	1368	-	ENSXETP00000058964	455 (aa)	-	F7C306

Gene Model

Click here to download ENSXETG00000030345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000030345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000030345	GPATCH3	99	51.400	ENSG00000198746	GPATCH3	95	57.377	Homo_sapiens
ENSXETG00000030345	GPATCH3	99	51.089	ENSAPOG00000001212	gpatch3	96	51.287	Acanthochromis_polyacanthus
ENSXETG00000030345	GPATCH3	99	52.727	ENSAMEG00000010801	GPATCH3	94	53.131	Ailuropoda_melanoleuca
ENSXETG00000030345	GPATCH3	99	51.485	ENSAOCG00000019352	gpatch3	96	51.485	Amphiprion_ocellaris
ENSXETG00000030345	GPATCH3	99	50.495	ENSAPEG00000018926	gpatch3	96	51.400	Amphiprion_percula
ENSXETG00000030345	GPATCH3	99	51.093	ENSATEG00000023759	gpatch3	96	52.485	Anabas_testudineus
ENSXETG00000030345	GPATCH3	72	62.941	ENSAPLG00000010745	GPATCH3	99	62.941	Anas_platyrhynchos
ENSXETG00000030345	GPATCH3	98	55.943	ENSACAG00000016709	GPATCH3	94	55.533	Anolis_carolinensis
ENSXETG00000030345	GPATCH3	98	50.902	ENSANAG00000035944	GPATCH3	96	51.503	Aotus_nancymaae
ENSXETG00000030345	GPATCH3	98	50.398	ENSACLG00000012807	gpatch3	95	51.195	Astatotilapia_calliptera
ENSXETG00000030345	GPATCH3	97	57.812	ENSAMXG00000034582	gpatch3	95	57.812	Astyanax_mexicanus
ENSXETG00000030345	GPATCH3	99	53.629	ENSBTAG00000014849	GPATCH3	94	53.629	Bos_taurus
ENSXETG00000030345	GPATCH3	98	36.128	WBGene00019467	K07B1.7	93	37.120	Caenorhabditis_elegans
ENSXETG00000030345	GPATCH3	98	50.902	ENSCJAG00000010000	GPATCH3	93	51.503	Callithrix_jacchus
ENSXETG00000030345	GPATCH3	99	52.727	ENSCAFG00000012265	GPATCH3	94	52.727	Canis_familiaris
ENSXETG00000030345	GPATCH3	99	52.727	ENSCAFG00020021640	GPATCH3	94	52.727	Canis_lupus_dingo
ENSXETG00000030345	GPATCH3	99	53.226	ENSCHIG00000024245	GPATCH3	93	53.226	Capra_hircus
ENSXETG00000030345	GPATCH3	99	51.400	ENSTSYG00000011753	GPATCH3	94	52.000	Carlito_syrichta
ENSXETG00000030345	GPATCH3	68	56.646	ENSCAPG00000007313	GPATCH3	94	56.646	Cavia_aperea
ENSXETG00000030345	GPATCH3	100	51.373	ENSCPOG00000010404	GPATCH3	96	51.373	Cavia_porcellus
ENSXETG00000030345	GPATCH3	98	50.701	ENSCCAG00000030482	GPATCH3	96	51.303	Cebus_capucinus
ENSXETG00000030345	GPATCH3	99	50.800	ENSCATG00000033598	GPATCH3	94	51.400	Cercocebus_atys
ENSXETG00000030345	GPATCH3	98	54.082	ENSCLAG00000012064	GPATCH3	95	54.065	Chinchilla_lanigera
ENSXETG00000030345	GPATCH3	99	57.479	ENSCPBG00000024968	GPATCH3	94	57.974	Chrysemys_picta_bellii
ENSXETG00000030345	GPATCH3	99	51.600	ENSCANG00000036795	GPATCH3	94	52.200	Colobus_angolensis_palliatus
ENSXETG00000030345	GPATCH3	99	53.862	ENSCGRG00001002930	Gpatch3	94	54.697	Cricetulus_griseus_chok1gshd
ENSXETG00000030345	GPATCH3	99	53.862	ENSCGRG00000004699	Gpatch3	94	54.697	Cricetulus_griseus_crigri
ENSXETG00000030345	GPATCH3	99	49.804	ENSCSEG00000005277	gpatch3	96	51.093	Cynoglossus_semilaevis
ENSXETG00000030345	GPATCH3	98	51.292	ENSCVAG00000000827	gpatch3	96	51.800	Cyprinodon_variegatus
ENSXETG00000030345	GPATCH3	91	70.616	ENSDARG00000052747	gpatch3	65	69.626	Danio_rerio
ENSXETG00000030345	GPATCH3	98	51.303	ENSDNOG00000016999	GPATCH3	94	51.904	Dasypus_novemcinctus
ENSXETG00000030345	GPATCH3	99	43.478	ENSEBUG00000013911	gpatch3	91	43.701	Eptatretus_burgeri
ENSXETG00000030345	GPATCH3	98	52.834	ENSEASG00005008636	GPATCH3	97	50.787	Equus_asinus_asinus
ENSXETG00000030345	GPATCH3	98	53.036	ENSECAG00000007653	GPATCH3	94	52.929	Equus_caballus
ENSXETG00000030345	GPATCH3	99	51.200	ENSELUG00000000963	gpatch3	97	51.703	Esox_lucius
ENSXETG00000030345	GPATCH3	99	51.111	ENSFCAG00000012819	GPATCH3	94	51.919	Felis_catus
ENSXETG00000030345	GPATCH3	73	63.265	ENSFALG00000000319	GPATCH3	94	63.265	Ficedula_albicollis
ENSXETG00000030345	GPATCH3	99	51.098	ENSFDAG00000016270	GPATCH3	94	52.200	Fukomys_damarensis
ENSXETG00000030345	GPATCH3	98	52.218	ENSFHEG00000015264	gpatch3	96	52.772	Fundulus_heteroclitus
ENSXETG00000030345	GPATCH3	99	49.206	ENSGMOG00000000991	gpatch3	97	49.206	Gadus_morhua
ENSXETG00000030345	GPATCH3	99	56.809	ENSGALG00000000881	GPATCH3	93	56.809	Gallus_gallus
ENSXETG00000030345	GPATCH3	98	51.587	ENSGAFG00000002531	gpatch3	90	61.371	Gambusia_affinis
ENSXETG00000030345	GPATCH3	99	49.405	ENSGACG00000007199	gpatch3	96	49.405	Gasterosteus_aculeatus
ENSXETG00000030345	GPATCH3	99	57.296	ENSGAGG00000023286	GPATCH3	94	57.792	Gopherus_agassizii
ENSXETG00000030345	GPATCH3	99	51.400	ENSGGOG00000015305	GPATCH3	94	52.000	Gorilla_gorilla
ENSXETG00000030345	GPATCH3	98	50.996	ENSHBUG00000020513	gpatch3	93	58.944	Haplochromis_burtoni
ENSXETG00000030345	GPATCH3	100	51.176	ENSHGLG00000012492	GPATCH3	97	52.353	Heterocephalus_glaber_female
ENSXETG00000030345	GPATCH3	100	51.176	ENSHGLG00100016909	GPATCH3	97	52.353	Heterocephalus_glaber_male
ENSXETG00000030345	GPATCH3	100	51.287	ENSHCOG00000005739	gpatch3	97	51.491	Hippocampus_comes
ENSXETG00000030345	GPATCH3	98	49.416	ENSIPUG00000007697	gpatch3	99	60.323	Ictalurus_punctatus
ENSXETG00000030345	GPATCH3	99	51.600	ENSSTOG00000015220	GPATCH3	97	50.586	Ictidomys_tridecemlineatus
ENSXETG00000030345	GPATCH3	98	53.939	ENSJJAG00000003292	Gpatch3	94	53.939	Jaculus_jaculus
ENSXETG00000030345	GPATCH3	99	49.609	ENSKMAG00000020717	gpatch3	96	50.294	Kryptolebias_marmoratus
ENSXETG00000030345	GPATCH3	99	50.591	ENSLBEG00000007046	gpatch3	95	51.779	Labrus_bergylta
ENSXETG00000030345	GPATCH3	95	69.333	ENSLACG00000011400	GPATCH3	79	71.163	Latimeria_chalumnae
ENSXETG00000030345	GPATCH3	98	51.400	ENSLOCG00000003858	gpatch3	97	51.717	Lepisosteus_oculatus
ENSXETG00000030345	GPATCH3	100	50.784	ENSLAFG00000016691	GPATCH3	96	51.569	Loxodonta_africana
ENSXETG00000030345	GPATCH3	99	51.600	ENSMFAG00000030918	GPATCH3	94	52.200	Macaca_fascicularis
ENSXETG00000030345	GPATCH3	99	51.600	ENSMMUG00000018723	GPATCH3	94	52.200	Macaca_mulatta
ENSXETG00000030345	GPATCH3	88	43.333	ENSMNEG00000033889	GPATCH3	92	44.000	Macaca_nemestrina
ENSXETG00000030345	GPATCH3	99	51.800	ENSMLEG00000033364	GPATCH3	94	52.400	Mandrillus_leucophaeus
ENSXETG00000030345	GPATCH3	99	52.400	ENSMAMG00000023975	gpatch3	96	53.000	Mastacembelus_armatus
ENSXETG00000030345	GPATCH3	98	50.398	ENSMZEG00005019731	gpatch3	95	51.195	Maylandia_zebra
ENSXETG00000030345	GPATCH3	72	61.947	ENSMGAG00000000813	GPATCH3	93	61.947	Meleagris_gallopavo
ENSXETG00000030345	GPATCH3	99	52.390	ENSMAUG00000002005	Gpatch3	97	51.544	Mesocricetus_auratus
ENSXETG00000030345	GPATCH3	99	52.600	ENSMICG00000015656	GPATCH3	94	52.600	Microcebus_murinus
ENSXETG00000030345	GPATCH3	99	52.096	ENSMOCG00000022375	Gpatch3	97	51.462	Microtus_ochrogaster
ENSXETG00000030345	GPATCH3	72	61.493	ENSMMOG00000008963	gpatch3	94	61.493	Mola_mola
ENSXETG00000030345	GPATCH3	100	51.650	ENSMODG00000014417	GPATCH3	95	52.539	Monodelphis_domestica
ENSXETG00000030345	GPATCH3	99	51.587	ENSMALG00000007586	gpatch3	96	51.800	Monopterus_albus
ENSXETG00000030345	GPATCH3	99	52.800	MGP_CAROLIEiJ_G0026594	Gpatch3	97	51.852	Mus_caroli
ENSXETG00000030345	GPATCH3	99	53.000	ENSMUSG00000028850	Gpatch3	97	51.751	Mus_musculus
ENSXETG00000030345	GPATCH3	99	53.815	MGP_PahariEiJ_G0028927	Gpatch3	98	52.838	Mus_pahari
ENSXETG00000030345	GPATCH3	99	53.082	MGP_SPRETEiJ_G0027575	Gpatch3	99	58.944	Mus_spretus
ENSXETG00000030345	GPATCH3	99	52.525	ENSMPUG00000015665	GPATCH3	94	52.929	Mustela_putorius_furo
ENSXETG00000030345	GPATCH3	99	53.659	ENSMLUG00000023528	GPATCH3	94	54.472	Myotis_lucifugus
ENSXETG00000030345	GPATCH3	99	51.400	ENSNGAG00000006821	Gpatch3	97	50.881	Nannospalax_galili
ENSXETG00000030345	GPATCH3	98	47.862	ENSNBRG00000000365	gpatch3	95	48.847	Neolamprologus_brichardi
ENSXETG00000030345	GPATCH3	92	50.641	ENSNLEG00000009387	GPATCH3	92	51.282	Nomascus_leucogenys
ENSXETG00000030345	GPATCH3	99	53.493	ENSMEUG00000003236	GPATCH3	93	54.065	Notamacropus_eugenii
ENSXETG00000030345	GPATCH3	99	53.252	ENSOPRG00000016429	GPATCH3	94	53.252	Ochotona_princeps
ENSXETG00000030345	GPATCH3	99	52.632	ENSODEG00000003292	GPATCH3	94	53.441	Octodon_degus
ENSXETG00000030345	GPATCH3	100	52.485	ENSONIG00000006771	gpatch3	96	52.485	Oreochromis_niloticus
ENSXETG00000030345	GPATCH3	90	51.562	ENSOCUG00000006411	GPATCH3	95	51.556	Oryctolagus_cuniculus
ENSXETG00000030345	GPATCH3	98	50.398	ENSORLG00000004435	gpatch3	96	51.000	Oryzias_latipes
ENSXETG00000030345	GPATCH3	98	50.295	ENSORLG00020022609	gpatch3	96	50.295	Oryzias_latipes_hni
ENSXETG00000030345	GPATCH3	98	50.294	ENSORLG00015008692	gpatch3	92	61.238	Oryzias_latipes_hsok
ENSXETG00000030345	GPATCH3	98	52.716	ENSOMEG00000010991	gpatch3	96	52.716	Oryzias_melastigma
ENSXETG00000030345	GPATCH3	99	52.600	ENSOGAG00000011647	GPATCH3	95	52.600	Otolemur_garnettii
ENSXETG00000030345	GPATCH3	99	52.823	ENSOARG00000003955	GPATCH3	92	52.218	Ovis_aries
ENSXETG00000030345	GPATCH3	99	51.200	ENSPPAG00000032902	GPATCH3	94	51.800	Pan_paniscus
ENSXETG00000030345	GPATCH3	99	51.606	ENSPPRG00000024244	GPATCH3	94	51.919	Panthera_pardus
ENSXETG00000030345	GPATCH3	99	50.891	ENSPTIG00000014693	GPATCH3	94	51.195	Panthera_tigris_altaica
ENSXETG00000030345	GPATCH3	99	51.200	ENSPTRG00000023419	GPATCH3	94	51.800	Pan_troglodytes
ENSXETG00000030345	GPATCH3	99	51.800	ENSPANG00000007984	GPATCH3	94	52.400	Papio_anubis
ENSXETG00000030345	GPATCH3	98	53.984	ENSPKIG00000020073	gpatch3	95	54.582	Paramormyrops_kingsleyae
ENSXETG00000030345	GPATCH3	85	58.838	ENSPSIG00000017160	GPATCH3	95	58.838	Pelodiscus_sinensis
ENSXETG00000030345	GPATCH3	98	53.049	ENSPMGG00000001703	gpatch3	96	53.455	Periophthalmus_magnuspinnatus
ENSXETG00000030345	GPATCH3	99	51.195	ENSPEMG00000020632	Gpatch3	97	50.682	Peromyscus_maniculatus_bairdii
ENSXETG00000030345	GPATCH3	99	53.614	ENSPCIG00000012681	GPATCH3	93	53.815	Phascolarctos_cinereus
ENSXETG00000030345	GPATCH3	98	51.111	ENSPFOG00000009928	gpatch3	96	51.633	Poecilia_formosa
ENSXETG00000030345	GPATCH3	98	50.891	ENSPLAG00000023784	gpatch3	96	51.089	Poecilia_latipinna
ENSXETG00000030345	GPATCH3	98	51.089	ENSPMEG00000010268	gpatch3	96	51.282	Poecilia_mexicana
ENSXETG00000030345	GPATCH3	98	52.245	ENSPREG00000008873	gpatch3	95	52.401	Poecilia_reticulata
ENSXETG00000030345	GPATCH3	99	51.600	ENSPPYG00000001675	GPATCH3	94	52.200	Pongo_abelii
ENSXETG00000030345	GPATCH3	100	50.000	ENSPCAG00000008286	GPATCH3	99	49.904	Procavia_capensis
ENSXETG00000030345	GPATCH3	99	52.000	ENSPCOG00000020145	GPATCH3	94	52.000	Propithecus_coquereli
ENSXETG00000030345	GPATCH3	86	62.222	ENSPVAG00000017282	GPATCH3	94	49.187	Pteropus_vampyrus
ENSXETG00000030345	GPATCH3	98	50.398	ENSPNYG00000005172	gpatch3	97	51.195	Pundamilia_nyererei
ENSXETG00000030345	GPATCH3	100	49.711	ENSPNAG00000018501	gpatch3	98	50.677	Pygocentrus_nattereri
ENSXETG00000030345	GPATCH3	99	53.200	ENSRNOG00000007097	Gpatch3	97	52.157	Rattus_norvegicus
ENSXETG00000030345	GPATCH3	99	52.400	ENSRBIG00000005853	GPATCH3	94	52.400	Rhinopithecus_bieti
ENSXETG00000030345	GPATCH3	99	51.800	ENSRROG00000038382	GPATCH3	94	52.400	Rhinopithecus_roxellana
ENSXETG00000030345	GPATCH3	98	51.004	ENSSBOG00000019680	GPATCH3	94	59.050	Saimiri_boliviensis_boliviensis
ENSXETG00000030345	GPATCH3	99	52.756	ENSSHAG00000014268	GPATCH3	96	52.308	Sarcophilus_harrisii
ENSXETG00000030345	GPATCH3	98	52.353	ENSSFOG00015009602	gpatch3	97	52.259	Scleropages_formosus
ENSXETG00000030345	GPATCH3	99	51.485	ENSSMAG00000002067	gpatch3	96	51.485	Scophthalmus_maximus
ENSXETG00000030345	GPATCH3	100	50.491	ENSSDUG00000017071	gpatch3	97	51.277	Seriola_dumerili
ENSXETG00000030345	GPATCH3	100	50.295	ENSSLDG00000016549	gpatch3	97	51.081	Seriola_lalandi_dorsalis
ENSXETG00000030345	GPATCH3	100	57.233	ENSSPUG00000018299	GPATCH3	96	57.717	Sphenodon_punctatus
ENSXETG00000030345	GPATCH3	99	50.199	ENSSPAG00000013046	gpatch3	96	50.398	Stegastes_partitus
ENSXETG00000030345	GPATCH3	99	52.727	ENSSSCG00000003564	GPATCH3	94	50.984	Sus_scrofa
ENSXETG00000030345	GPATCH3	85	57.250	ENSTGUG00000000986	GPATCH3	98	57.250	Taeniopygia_guttata
ENSXETG00000030345	GPATCH3	99	49.119	ENSTRUG00000013294	gpatch3	96	49.119	Takifugu_rubripes
ENSXETG00000030345	GPATCH3	100	51.896	ENSTNIG00000009657	gpatch3	99	51.896	Tetraodon_nigroviridis
ENSXETG00000030345	GPATCH3	82	61.438	ENSTBEG00000002042	GPATCH3	83	61.438	Tupaia_belangeri
ENSXETG00000030345	GPATCH3	98	49.290	ENSTTRG00000016677	GPATCH3	94	49.293	Tursiops_truncatus
ENSXETG00000030345	GPATCH3	99	51.919	ENSUAMG00000026235	GPATCH3	94	52.525	Ursus_americanus
ENSXETG00000030345	GPATCH3	99	51.919	ENSUMAG00000011894	GPATCH3	94	52.525	Ursus_maritimus
ENSXETG00000030345	GPATCH3	99	52.716	ENSVVUG00000012041	GPATCH3	94	52.929	Vulpes_vulpes
ENSXETG00000030345	GPATCH3	100	53.448	ENSXCOG00000016129	gpatch3	97	53.863	Xiphophorus_couchianus
ENSXETG00000030345	GPATCH3	100	50.781	ENSXMAG00000010749	gpatch3	97	50.781	Xiphophorus_maculatus