EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000030359 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 4904 bases
Position: chrGL172761.1:1339021-1343924
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000062995	RVT_1	PF00078.27	1.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064045	-	3897	-	ENSXETP00000062995	1299 (aa)	-	F6Y2F9

Gene Model

Click here to download ENSXETG00000030359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000030359's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000030359	-	66	42.935	ENSXETG00000034134	-	99	42.935
ENSXETG00000030359	-	97	33.006	ENSXETG00000002021	-	100	33.006
ENSXETG00000030359	-	53	88.889	ENSXETG00000034336	-	92	88.889
ENSXETG00000030359	-	98	34.156	ENSXETG00000031149	-	97	34.156
ENSXETG00000030359	-	66	44.382	ENSXETG00000034016	-	90	44.382
ENSXETG00000030359	-	64	37.949	ENSXETG00000030860	-	93	37.949
ENSXETG00000030359	-	99	37.388	ENSXETG00000031094	-	100	37.388
ENSXETG00000030359	-	69	44.643	ENSXETG00000032308	-	99	44.643
ENSXETG00000030359	-	74	54.355	ENSXETG00000031859	-	96	53.203
ENSXETG00000030359	-	99	52.143	ENSXETG00000031887	-	96	52.143
ENSXETG00000030359	-	52	31.975	ENSXETG00000032833	-	97	31.975
ENSXETG00000030359	-	99	32.337	ENSXETG00000033627	-	99	32.337
ENSXETG00000030359	-	74	55.172	ENSXETG00000033831	-	99	55.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000030359	-	80	30.699	ENSDARG00000099418	CABZ01030017.1	99	30.699	Danio_rerio
ENSXETG00000030359	-	63	33.063	ENSKMAG00000020777	-	97	33.063	Kryptolebias_marmoratus
ENSXETG00000030359	-	88	31.397	ENSKMAG00000020455	-	98	30.924	Kryptolebias_marmoratus