EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000030437 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 19862 bases
Position: chrGL172663.1:2173417-2193278
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060832	Ago_hook	PF10427.9	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000066373	TNRC6A-201	5647	-	ENSXETP00000060832	1820 (aa)	-	F6SWY5

Gene Model

Click here to download ENSXETG00000030437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000030437's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000030437	TNRC6A	86	38.873	ENSXETG00000019470	tnrc6c	97	38.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000030437	TNRC6A	99	65.965	ENSG00000090905	TNRC6A	100	84.375	Homo_sapiens
ENSXETG00000030437	TNRC6A	99	66.451	ENSAMEG00000009333	TNRC6A	96	65.988	Ailuropoda_melanoleuca
ENSXETG00000030437	TNRC6A	99	69.930	ENSAPLG00000009978	TNRC6A	98	70.016	Anas_platyrhynchos
ENSXETG00000030437	TNRC6A	97	49.137	ENSACAG00000011857	TNRC6A	94	50.234	Anolis_carolinensis
ENSXETG00000030437	TNRC6A	99	65.659	ENSANAG00000025252	TNRC6A	95	65.576	Aotus_nancymaae
ENSXETG00000030437	TNRC6A	96	52.404	ENSAMXG00000019919	tnrc6a	100	52.789	Astyanax_mexicanus
ENSXETG00000030437	TNRC6A	99	65.696	ENSBTAG00000017999	TNRC6A	96	65.343	Bos_taurus
ENSXETG00000030437	TNRC6A	99	65.497	ENSCJAG00000020677	TNRC6A	94	65.416	Callithrix_jacchus
ENSXETG00000030437	TNRC6A	99	66.128	ENSCAFG00000017531	TNRC6A	94	65.667	Canis_familiaris
ENSXETG00000030437	TNRC6A	99	65.213	ENSCAFG00020021160	TNRC6A	97	63.076	Canis_lupus_dingo
ENSXETG00000030437	TNRC6A	99	63.827	ENSCHIG00000019448	TNRC6A	99	62.991	Capra_hircus
ENSXETG00000030437	TNRC6A	99	65.822	ENSTSYG00000012711	TNRC6A	96	65.171	Carlito_syrichta
ENSXETG00000030437	TNRC6A	99	64.205	ENSCPOG00000036684	TNRC6A	95	63.729	Cavia_porcellus
ENSXETG00000030437	TNRC6A	99	65.767	ENSCCAG00000033664	TNRC6A	96	65.169	Cebus_capucinus
ENSXETG00000030437	TNRC6A	99	65.376	ENSCATG00000019284	TNRC6A	95	63.548	Cercocebus_atys
ENSXETG00000030437	TNRC6A	99	62.480	ENSCLAG00000010217	TNRC6A	94	62.211	Chinchilla_lanigera
ENSXETG00000030437	TNRC6A	99	66.235	ENSCSAG00000006561	TNRC6A	94	65.705	Chlorocebus_sabaeus
ENSXETG00000030437	TNRC6A	94	64.734	ENSCHOG00000009374	TNRC6A	89	63.857	Choloepus_hoffmanni
ENSXETG00000030437	TNRC6A	96	66.537	ENSCPBG00000001881	TNRC6A	99	67.632	Chrysemys_picta_bellii
ENSXETG00000030437	TNRC6A	99	66.235	ENSCANG00000041549	TNRC6A	94	65.968	Colobus_angolensis_palliatus
ENSXETG00000030437	TNRC6A	99	65.553	ENSCGRG00001015021	Tnrc6a	96	65.360	Cricetulus_griseus_chok1gshd
ENSXETG00000030437	TNRC6A	99	63.342	ENSCGRG00000013351	Tnrc6a	94	63.265	Cricetulus_griseus_crigri
ENSXETG00000030437	TNRC6A	96	54.041	ENSDARG00000079688	tnrc6a	99	54.575	Danio_rerio
ENSXETG00000030437	TNRC6A	99	65.159	ENSDNOG00000013989	TNRC6A	96	64.826	Dasypus_novemcinctus
ENSXETG00000030437	TNRC6A	99	59.968	ENSETEG00000014658	TNRC6A	95	59.752	Echinops_telfairi
ENSXETG00000030437	TNRC6A	99	65.409	ENSEASG00005017693	TNRC6A	99	64.975	Equus_asinus_asinus
ENSXETG00000030437	TNRC6A	99	65.409	ENSECAG00000025056	TNRC6A	99	64.975	Equus_caballus
ENSXETG00000030437	TNRC6A	99	61.240	ENSEEUG00000004530	TNRC6A	95	60.944	Erinaceus_europaeus
ENSXETG00000030437	TNRC6A	99	65.876	ENSFCAG00000025236	TNRC6A	95	65.556	Felis_catus
ENSXETG00000030437	TNRC6A	99	67.878	ENSFALG00000003757	TNRC6A	95	68.359	Ficedula_albicollis
ENSXETG00000030437	TNRC6A	96	66.796	ENSGALG00000006068	TNRC6A	99	68.058	Gallus_gallus
ENSXETG00000030437	TNRC6A	96	65.836	ENSGAGG00000023209	TNRC6A	99	67.093	Gopherus_agassizii
ENSXETG00000030437	TNRC6A	99	65.965	ENSGGOG00000005137	TNRC6A	95	65.541	Gorilla_gorilla
ENSXETG00000030437	TNRC6A	99	63.195	ENSHGLG00000012474	-	95	62.755	Heterocephalus_glaber_female
ENSXETG00000030437	TNRC6A	99	63.087	ENSHGLG00100012496	-	95	62.681	Heterocephalus_glaber_male
ENSXETG00000030437	TNRC6A	99	65.750	ENSSTOG00000023394	TNRC6A	93	65.294	Ictidomys_tridecemlineatus
ENSXETG00000030437	TNRC6A	99	63.186	ENSLACG00000006277	TNRC6A	98	63.665	Latimeria_chalumnae
ENSXETG00000030437	TNRC6A	99	80.580	ENSLOCG00000005517	tnrc6a	89	80.580	Lepisosteus_oculatus
ENSXETG00000030437	TNRC6A	99	64.136	ENSLAFG00000004209	TNRC6A	97	64.109	Loxodonta_africana
ENSXETG00000030437	TNRC6A	99	65.376	ENSMFAG00000003824	TNRC6A	95	64.976	Macaca_fascicularis
ENSXETG00000030437	TNRC6A	99	66.181	ENSMMUG00000020428	TNRC6A	94	65.774	Macaca_mulatta
ENSXETG00000030437	TNRC6A	99	66.127	ENSMNEG00000034854	TNRC6A	95	64.923	Macaca_nemestrina
ENSXETG00000030437	TNRC6A	99	65.430	ENSMLEG00000042737	TNRC6A	93	65.029	Mandrillus_leucophaeus
ENSXETG00000030437	TNRC6A	99	69.268	ENSMGAG00000006455	TNRC6A	93	69.619	Meleagris_gallopavo
ENSXETG00000030437	TNRC6A	99	63.720	ENSMAUG00000012750	Tnrc6a	94	63.534	Mesocricetus_auratus
ENSXETG00000030437	TNRC6A	99	66.236	ENSMICG00000030685	TNRC6A	95	66.004	Microcebus_murinus
ENSXETG00000030437	TNRC6A	99	64.166	ENSMOCG00000000152	Tnrc6a	94	64.267	Microtus_ochrogaster
ENSXETG00000030437	TNRC6A	99	67.406	ENSMODG00000016348	TNRC6A	94	67.472	Monodelphis_domestica
ENSXETG00000030437	TNRC6A	99	63.808	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	67.655	Mus_caroli
ENSXETG00000030437	TNRC6A	99	63.842	ENSMUSG00000052707	Tnrc6a	99	67.774	Mus_musculus
ENSXETG00000030437	TNRC6A	99	63.666	MGP_PahariEiJ_G0013635	Tnrc6a	99	67.585	Mus_pahari
ENSXETG00000030437	TNRC6A	99	65.480	MGP_SPRETEiJ_G0031539	Tnrc6a	99	67.726	Mus_spretus
ENSXETG00000030437	TNRC6A	99	59.069	ENSMPUG00000012324	TNRC6A	97	58.706	Mustela_putorius_furo
ENSXETG00000030437	TNRC6A	99	64.528	ENSMLUG00000002701	TNRC6A	97	64.171	Myotis_lucifugus
ENSXETG00000030437	TNRC6A	99	64.332	ENSNGAG00000020702	Tnrc6a	94	64.090	Nannospalax_galili
ENSXETG00000030437	TNRC6A	99	64.359	ENSNLEG00000011851	TNRC6A	95	64.118	Nomascus_leucogenys
ENSXETG00000030437	TNRC6A	75	73.971	ENSMEUG00000015959	-	72	74.082	Notamacropus_eugenii
ENSXETG00000030437	TNRC6A	95	83.270	ENSOPRG00000005819	TNRC6A	89	83.270	Ochotona_princeps
ENSXETG00000030437	TNRC6A	99	62.123	ENSODEG00000012802	TNRC6A	95	62.091	Octodon_degus
ENSXETG00000030437	TNRC6A	92	68.470	ENSOANG00000007672	TNRC6A	99	68.182	Ornithorhynchus_anatinus
ENSXETG00000030437	TNRC6A	99	64.424	ENSOCUG00000004325	TNRC6A	97	64.209	Oryctolagus_cuniculus
ENSXETG00000030437	TNRC6A	99	66.182	ENSOGAG00000006666	TNRC6A	95	65.933	Otolemur_garnettii
ENSXETG00000030437	TNRC6A	99	65.019	ENSOARG00000017950	TNRC6A	98	64.370	Ovis_aries
ENSXETG00000030437	TNRC6A	99	65.965	ENSPPAG00000028379	TNRC6A	95	65.717	Pan_paniscus
ENSXETG00000030437	TNRC6A	99	65.876	ENSPPRG00000005861	TNRC6A	94	65.556	Panthera_pardus
ENSXETG00000030437	TNRC6A	99	65.930	ENSPTIG00000006346	TNRC6A	93	65.610	Panthera_tigris_altaica
ENSXETG00000030437	TNRC6A	99	66.019	ENSPTRG00000007898	TNRC6A	95	65.771	Pan_troglodytes
ENSXETG00000030437	TNRC6A	99	63.700	ENSPANG00000018523	TNRC6A	95	62.734	Papio_anubis
ENSXETG00000030437	TNRC6A	96	60.985	ENSPKIG00000012859	tnrc6a	99	60.985	Paramormyrops_kingsleyae
ENSXETG00000030437	TNRC6A	82	63.418	ENSPSIG00000003965	TNRC6A	99	63.873	Pelodiscus_sinensis
ENSXETG00000030437	TNRC6A	99	63.916	ENSPEMG00000016318	Tnrc6a	94	63.783	Peromyscus_maniculatus_bairdii
ENSXETG00000030437	TNRC6A	99	68.844	ENSPCIG00000012106	TNRC6A	98	68.323	Phascolarctos_cinereus
ENSXETG00000030437	TNRC6A	99	65.785	ENSPPYG00000007202	TNRC6A	94	65.323	Pongo_abelii
ENSXETG00000030437	TNRC6A	94	72.826	ENSPCAG00000008260	TNRC6A	88	72.826	Procavia_capensis
ENSXETG00000030437	TNRC6A	99	64.351	ENSPCOG00000010134	TNRC6A	93	64.125	Propithecus_coquereli
ENSXETG00000030437	TNRC6A	88	53.362	ENSPVAG00000012066	TNRC6A	94	53.479	Pteropus_vampyrus
ENSXETG00000030437	TNRC6A	99	65.335	ENSRNOG00000024737	Tnrc6a	94	65.089	Rattus_norvegicus
ENSXETG00000030437	TNRC6A	99	66.073	ENSRBIG00000014222	TNRC6A	95	65.667	Rhinopithecus_bieti
ENSXETG00000030437	TNRC6A	99	66.127	ENSRROG00000032360	TNRC6A	94	65.860	Rhinopithecus_roxellana
ENSXETG00000030437	TNRC6A	99	65.767	ENSSBOG00000036197	TNRC6A	99	66.957	Saimiri_boliviensis_boliviensis
ENSXETG00000030437	TNRC6A	96	66.135	ENSSHAG00000008811	TNRC6A	99	66.282	Sarcophilus_harrisii
ENSXETG00000030437	TNRC6A	95	79.302	ENSSFOG00015008920	tnrc6a	98	74.074	Scleropages_formosus
ENSXETG00000030437	TNRC6A	71	58.984	ENSSARG00000002479	TNRC6A	86	58.802	Sorex_araneus
ENSXETG00000030437	TNRC6A	95	67.188	ENSSPUG00000010525	TNRC6A	99	67.225	Sphenodon_punctatus
ENSXETG00000030437	TNRC6A	99	64.690	ENSSSCG00000038870	TNRC6A	99	67.245	Sus_scrofa
ENSXETG00000030437	TNRC6A	99	65.504	ENSTGUG00000006142	TNRC6A	95	66.900	Taeniopygia_guttata
ENSXETG00000030437	TNRC6A	99	63.774	ENSTBEG00000014965	TNRC6A	96	63.568	Tupaia_belangeri
ENSXETG00000030437	TNRC6A	92	73.786	ENSTTRG00000002008	TNRC6A	87	73.355	Tursiops_truncatus
ENSXETG00000030437	TNRC6A	80	59.682	ENSUAMG00000006656	-	90	59.250	Ursus_americanus
ENSXETG00000030437	TNRC6A	99	66.344	ENSUMAG00000008274	TNRC6A	99	66.085	Ursus_maritimus
ENSXETG00000030437	TNRC6A	54	64.516	ENSVPAG00000010764	-	52	64.182	Vicugna_pacos
ENSXETG00000030437	TNRC6A	95	85.000	ENSVVUG00000005380	TNRC6A	97	65.980	Vulpes_vulpes