EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000030938 (Gene tree)
Gene ID: -
Gene Symbol: rab41
Alias: -
Full Name: Xenopus tropicalis RAB41%2C member RAS oncogene family (rab41)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 19129 bases
Position: chrGL172753.1:1259871-1278999
Accession: NM_001102751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000058517	MMR_HSR1	PF01926.23	7.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000065845	-	2011	XM_012967863	ENSXETP00000058517	211 (aa)	XP_012823317	F6SX88

Gene Model

Click here to download ENSXETG00000030938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000030938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000030938	rab41	74	38.994	ENSXETG00000032443	RAB39B	75	38.994
ENSXETG00000030938	rab41	73	35.484	ENSXETG00000025484	rab11b.1	70	35.484
ENSXETG00000030938	rab41	73	35.669	ENSXETG00000022517	rerg	77	35.669
ENSXETG00000030938	rab41	74	32.911	ENSXETG00000021449	nras	82	32.911
ENSXETG00000030938	rab41	76	42.236	ENSXETG00000013633	rab30	79	42.236
ENSXETG00000030938	rab41	75	36.025	ENSXETG00000005944	rab7b	80	36.025
ENSXETG00000030938	rab41	74	33.544	ENSXETG00000003398	kras	84	33.544
ENSXETG00000030938	rab41	81	32.022	ENSXETG00000018133	rab9b	87	32.022
ENSXETG00000030938	rab41	92	36.275	ENSXETG00000008055	rab3b	99	36.275
ENSXETG00000030938	rab41	81	37.500	ENSXETG00000018183	rab33a	82	37.500
ENSXETG00000030938	rab41	69	36.986	ENSXETG00000004449	rab23	66	37.580
ENSXETG00000030938	rab41	73	39.610	ENSXETG00000026943	rab35	76	39.610
ENSXETG00000030938	rab41	75	35.882	ENSXETG00000013345	rab9a	83	35.882
ENSXETG00000030938	rab41	98	78.261	ENSXETG00000031363	-	99	78.261
ENSXETG00000030938	rab41	91	34.135	ENSXETG00000017184	rab2b	97	34.135
ENSXETG00000030938	rab41	76	36.420	ENSXETG00000007760	rap2b	88	36.420
ENSXETG00000030938	rab41	74	32.911	ENSXETG00000014935	ralb	83	32.911
ENSXETG00000030938	rab41	75	39.752	ENSXETG00000019257	rab34	62	39.752
ENSXETG00000030938	rab41	75	39.623	ENSXETG00000004289	rab12	65	35.096
ENSXETG00000030938	rab41	74	41.401	ENSXETG00000002201	rab15	74	41.401
ENSXETG00000030938	rab41	92	36.500	ENSXETG00000016176	rab7a	96	36.500
ENSXETG00000030938	rab41	59	40.800	ENSXETG00000020729	rab13	78	40.800
ENSXETG00000030938	rab41	93	38.164	ENSXETG00000016920	rab33b	86	38.164
ENSXETG00000030938	rab41	91	35.859	ENSXETG00000014011	rab1a	96	35.859
ENSXETG00000030938	rab41	74	36.306	ENSXETG00000006639	rab11a	73	36.306
ENSXETG00000030938	rab41	91	34.715	ENSXETG00000011370	rab35	96	34.715
ENSXETG00000030938	rab41	89	88.830	ENSXETG00000023200	rab6a	99	88.830
ENSXETG00000030938	rab41	93	36.000	ENSXETG00000020622	rab39a	97	36.000
ENSXETG00000030938	rab41	92	35.323	ENSXETG00000020404	rab25	93	35.323
ENSXETG00000030938	rab41	82	45.349	ENSXETG00000002305	rab5a	80	45.349
ENSXETG00000030938	rab41	88	31.746	ENSXETG00000014257	mgc75872	94	31.746
ENSXETG00000030938	rab41	74	36.306	ENSXETG00000021890	rab11b.2	71	36.306
ENSXETG00000030938	rab41	74	32.278	ENSXETG00000006040	hras	83	32.278
ENSXETG00000030938	rab41	73	32.468	ENSXETG00000015712	rabl2b	67	32.468
ENSXETG00000030938	rab41	79	40.351	ENSXETG00000004556	rab18	83	40.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000030938	rab41	99	96.172	ENSACIG00000010914	RAB41	99	96.172	Amphilophus_citrinellus
ENSXETG00000030938	rab41	99	96.172	ENSAOCG00000022426	RAB41	99	96.172	Amphiprion_ocellaris
ENSXETG00000030938	rab41	99	89.474	ENSAPEG00000007931	RAB41	99	89.474	Amphiprion_percula
ENSXETG00000030938	rab41	94	71.212	ENSTSYG00000000768	RAB41	87	71.212	Carlito_syrichta
ENSXETG00000030938	rab41	93	66.497	ENSCATG00000037380	RAB41	87	66.497	Cercocebus_atys
ENSXETG00000030938	rab41	99	98.104	ENSCPBG00000014340	RAB41	100	98.104	Chrysemys_picta_bellii
ENSXETG00000030938	rab41	99	91.388	ENSFHEG00000015996	RAB41	99	91.388	Fundulus_heteroclitus
ENSXETG00000030938	rab41	99	96.172	ENSHBUG00000014338	RAB41	99	96.172	Haplochromis_burtoni
ENSXETG00000030938	rab41	99	96.172	ENSLBEG00000008746	RAB41	99	96.172	Labrus_bergylta
ENSXETG00000030938	rab41	93	68.020	ENSMFAG00000000762	RAB41	87	68.020	Macaca_fascicularis
ENSXETG00000030938	rab41	93	68.020	ENSMMUG00000013937	RAB41	87	68.020	Macaca_mulatta
ENSXETG00000030938	rab41	93	67.513	ENSMNEG00000045569	RAB41	87	67.513	Macaca_nemestrina
ENSXETG00000030938	rab41	91	66.839	ENSMLEG00000038149	RAB41	86	66.839	Mandrillus_leucophaeus
ENSXETG00000030938	rab41	99	95.714	ENSONIG00000002774	RAB41	99	95.714	Oreochromis_niloticus
ENSXETG00000030938	rab41	99	95.215	ENSORLG00000027669	RAB41	99	95.215	Oryzias_latipes
ENSXETG00000030938	rab41	99	88.517	ENSORLG00015010161	RAB41	99	88.517	Oryzias_latipes_hsok
ENSXETG00000030938	rab41	96	97.044	ENSOMEG00000017258	RAB41	100	94.787	Oryzias_melastigma
ENSXETG00000030938	rab41	93	67.513	ENSPANG00000007317	RAB41	87	67.513	Papio_anubis
ENSXETG00000030938	rab41	99	94.762	ENSPKIG00000014618	-	100	94.762	Paramormyrops_kingsleyae
ENSXETG00000030938	rab41	99	96.172	ENSPMGG00000017830	RAB41	99	96.172	Periophthalmus_magnuspinnatus
ENSXETG00000030938	rab41	99	96.172	ENSPFOG00000011424	RAB41	99	96.172	Poecilia_formosa
ENSXETG00000030938	rab41	99	96.172	ENSPREG00000009535	RAB41	99	96.172	Poecilia_reticulata
ENSXETG00000030938	rab41	93	68.020	ENSRBIG00000027991	RAB41	87	68.020	Rhinopithecus_bieti
ENSXETG00000030938	rab41	99	97.619	ENSSFOG00015011268	RAB41	100	97.619	Scleropages_formosus
ENSXETG00000030938	rab41	99	94.340	ENSTNIG00000016831	RAB41	99	94.340	Tetraodon_nigroviridis
ENSXETG00000030938	rab41	99	96.172	ENSXCOG00000015802	RAB41	99	96.172	Xiphophorus_couchianus
ENSXETG00000030938	rab41	99	96.172	ENSXMAG00000027787	RAB41	99	96.172	Xiphophorus_maculatus