EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000030967 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 812 bases
Position: chrGL174127.1:3077-3888
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000062240	zf-C2H2	PF00096.26	1.3e-50	1	8
ENSXETP00000062240	zf-C2H2	PF00096.26	1.3e-50	2	8
ENSXETP00000062240	zf-C2H2	PF00096.26	1.3e-50	3	8
ENSXETP00000062240	zf-C2H2	PF00096.26	1.3e-50	4	8
ENSXETP00000062240	zf-C2H2	PF00096.26	1.3e-50	5	8
ENSXETP00000062240	zf-C2H2	PF00096.26	1.3e-50	6	8
ENSXETP00000062240	zf-C2H2	PF00096.26	1.3e-50	7	8
ENSXETP00000062240	zf-C2H2	PF00096.26	1.3e-50	8	8
ENSXETP00000062240	zf-met	PF12874.7	7.3e-06	1	2
ENSXETP00000062240	zf-met	PF12874.7	7.3e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000061563	-	747	-	ENSXETP00000062240	249 (aa)	-	F6YWB4

Gene Model

Click here to download ENSXETG00000030967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000030967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000030967	-	99	48.936	ENSXETG00000027149	-	99	48.936
ENSXETG00000030967	-	95	43.038	ENSXETG00000027366	snai1	53	43.038
ENSXETG00000030967	-	100	52.991	ENSXETG00000023597	-	99	52.991
ENSXETG00000030967	-	98	39.189	ENSXETG00000002339	znf423	83	39.189
ENSXETG00000030967	-	94	43.556	ENSXETG00000001911	znf668	92	43.556
ENSXETG00000030967	-	100	38.938	ENSXETG00000012506	znf91	99	38.938
ENSXETG00000030967	-	99	36.245	ENSXETG00000001910	znf646	99	39.521
ENSXETG00000030967	-	97	41.096	ENSXETG00000027536	znf574	68	47.748
ENSXETG00000030967	-	95	47.368	ENSXETG00000034213	-	98	47.368
ENSXETG00000030967	-	91	41.964	ENSXETG00000016091	e4f1	59	40.146
ENSXETG00000030967	-	91	43.860	ENSXETG00000006263	gfi1b	58	43.860
ENSXETG00000030967	-	99	47.701	ENSXETG00000033508	-	73	47.701
ENSXETG00000030967	-	88	38.750	ENSXETG00000024897	ovol2	57	38.750
ENSXETG00000030967	-	99	53.812	ENSXETG00000006575	znf420	89	53.812
ENSXETG00000030967	-	70	35.878	ENSXETG00000020587	ovol1	54	35.878
ENSXETG00000030967	-	94	50.855	ENSXETG00000013882	-	97	50.855
ENSXETG00000030967	-	94	45.513	ENSXETG00000010512	-	92	45.513
ENSXETG00000030967	-	98	48.879	ENSXETG00000002690	-	54	48.879
ENSXETG00000030967	-	94	51.965	ENSXETG00000031460	-	89	51.965
ENSXETG00000030967	-	94	46.637	ENSXETG00000016062	znf184	97	46.637
ENSXETG00000030967	-	90	41.256	ENSXETG00000033098	ZNF366	50	41.256
ENSXETG00000030967	-	98	48.458	ENSXETG00000002717	-	100	48.458
ENSXETG00000030967	-	95	40.323	ENSXETG00000002101	prdm5	74	43.182
ENSXETG00000030967	-	94	39.552	ENSXETG00000024006	snai2	52	39.552
ENSXETG00000030967	-	94	57.831	ENSXETG00000030249	-	51	57.831
ENSXETG00000030967	-	99	46.296	ENSXETG00000031192	-	100	46.296
ENSXETG00000030967	-	98	47.826	ENSXETG00000006490	znf350	95	47.826
ENSXETG00000030967	-	94	52.444	ENSXETG00000032038	-	94	52.444
ENSXETG00000030967	-	94	41.525	ENSXETG00000001980	znf408	75	41.525
ENSXETG00000030967	-	94	46.341	ENSXETG00000027484	znf432	62	46.341
ENSXETG00000030967	-	96	49.519	ENSXETG00000024118	-	100	49.500
ENSXETG00000030967	-	98	46.753	ENSXETG00000031310	-	69	45.968
ENSXETG00000030967	-	98	49.327	ENSXETG00000008801	znf628	99	49.327
ENSXETG00000030967	-	98	40.367	ENSXETG00000013744	znf319	89	40.367
ENSXETG00000030967	-	97	49.289	ENSXETG00000025282	-	99	49.289
ENSXETG00000030967	-	99	48.252	ENSXETG00000030307	-	100	48.252
ENSXETG00000030967	-	98	52.137	ENSXETG00000023643	znf484	100	52.137
ENSXETG00000030967	-	96	34.247	ENSXETG00000004190	patz1	52	32.941
ENSXETG00000030967	-	99	45.614	ENSXETG00000026673	-	90	45.614
ENSXETG00000030967	-	99	51.142	ENSXETG00000017175	-	100	51.142
ENSXETG00000030967	-	95	44.199	ENSXETG00000015125	-	95	45.143
ENSXETG00000030967	-	98	53.540	ENSXETG00000016781	-	99	55.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000030967	-	99	51.613	ENSACIG00000017647	-	94	49.372	Amphilophus_citrinellus
ENSXETG00000030967	-	98	55.556	ENSAOCG00000003277	-	85	55.556	Amphiprion_ocellaris
ENSXETG00000030967	-	99	44.240	ENSAPEG00000016601	-	83	44.240	Amphiprion_percula
ENSXETG00000030967	-	94	49.123	ENSACLG00000005615	-	61	49.123	Astatotilapia_calliptera
ENSXETG00000030967	-	98	42.991	ENSACLG00000015989	-	91	42.991	Astatotilapia_calliptera
ENSXETG00000030967	-	99	47.598	ENSCSAVG00000002179	-	99	47.598	Ciona_savignyi
ENSXETG00000030967	-	94	50.000	ENSCGRG00001004047	-	64	50.000	Cricetulus_griseus_chok1gshd
ENSXETG00000030967	-	94	50.777	ENSCSEG00000001771	-	59	50.777	Cynoglossus_semilaevis
ENSXETG00000030967	-	100	47.368	ENSEBUG00000002537	-	87	47.368	Eptatretus_burgeri
ENSXETG00000030967	-	100	48.444	ENSEBUG00000011244	-	77	48.444	Eptatretus_burgeri
ENSXETG00000030967	-	99	50.388	ENSEBUG00000002589	-	76	50.388	Eptatretus_burgeri
ENSXETG00000030967	-	99	51.282	ENSHBUG00000012758	-	88	48.936	Haplochromis_burtoni
ENSXETG00000030967	-	94	49.123	ENSHBUG00000020071	-	61	49.123	Haplochromis_burtoni
ENSXETG00000030967	-	94	42.690	ENSHBUG00000016546	-	67	42.922	Haplochromis_burtoni
ENSXETG00000030967	-	94	42.286	ENSMZEG00005020731	-	84	42.286	Maylandia_zebra
ENSXETG00000030967	-	94	42.667	ENSMZEG00005027844	-	67	42.690	Maylandia_zebra
ENSXETG00000030967	-	95	54.274	MGP_CAROLIEiJ_G0029612	Zfp141	55	54.274	Mus_caroli
ENSXETG00000030967	-	95	54.274	ENSMUSG00000092416	Zfp141	55	54.274	Mus_musculus
ENSXETG00000030967	-	94	54.274	MGP_SPRETEiJ_G0030709	-	80	54.274	Mus_spretus
ENSXETG00000030967	-	94	49.708	ENSNBRG00000023229	-	80	49.708	Neolamprologus_brichardi
ENSXETG00000030967	-	99	43.478	ENSONIG00000014100	-	91	43.478	Oreochromis_niloticus
ENSXETG00000030967	-	96	46.000	ENSONIG00000006238	-	100	46.000	Oreochromis_niloticus
ENSXETG00000030967	-	98	44.715	ENSONIG00000018188	-	100	45.333	Oreochromis_niloticus
ENSXETG00000030967	-	100	39.823	ENSPFOG00000007708	-	99	40.083	Poecilia_formosa
ENSXETG00000030967	-	95	41.892	ENSPLAG00000010448	-	52	45.050	Poecilia_latipinna
ENSXETG00000030967	-	94	53.419	ENSPCAG00000001613	-	75	53.419	Procavia_capensis
ENSXETG00000030967	-	94	46.104	ENSPNYG00000005671	-	75	46.104	Pundamilia_nyererei
ENSXETG00000030967	-	94	55.882	ENSPNAG00000015131	-	88	55.882	Pygocentrus_nattereri
ENSXETG00000030967	-	94	56.054	ENSSFOG00015000652	ZNF775	91	56.054	Scleropages_formosus
ENSXETG00000030967	-	99	50.000	ENSSDUG00000005401	-	87	49.145	Seriola_dumerili
ENSXETG00000030967	-	94	46.667	ENSSDUG00000020595	-	85	45.128	Seriola_dumerili
ENSXETG00000030967	-	94	46.288	ENSSDUG00000004089	-	95	41.964	Seriola_dumerili
ENSXETG00000030967	-	94	52.071	ENSSPUG00000007064	-	98	50.237	Sphenodon_punctatus
ENSXETG00000030967	-	91	43.111	ENSSPAG00000009587	-	94	43.111	Stegastes_partitus
ENSXETG00000030967	-	94	56.250	ENSTTRG00000004891	-	77	56.250	Tursiops_truncatus