EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000031363 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 22556 bases
Position: chrGL172765.1:1465257-1487812
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000058804	MMR_HSR1	PF01926.23	8.7e-05	1	1
ENSXETP00000062820	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000062243	-	639	-	ENSXETP00000062820	212 (aa)	-	F6RYB3
ENSXETT00000064822	-	627	-	ENSXETP00000058804	208 (aa)	-	F6YXC5

Gene Model

Click here to download ENSXETG00000031363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000031363's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000031363	-	79	30.303	ENSXETG00000007760	rap2b	90	30.303
ENSXETG00000031363	-	58	32.231	ENSXETG00000006040	hras	66	30.952
ENSXETG00000031363	-	65	38.849	ENSXETG00000020622	rab39a	65	38.849
ENSXETG00000031363	-	68	30.345	ENSXETG00000022517	rerg	71	30.345
ENSXETG00000031363	-	58	30.075	ENSXETG00000016416	rasl10a	64	30.075
ENSXETG00000031363	-	59	39.344	ENSXETG00000020404	rab25	56	39.344
ENSXETG00000031363	-	94	32.512	ENSXETG00000016176	rab7a	96	32.512
ENSXETG00000031363	-	52	36.111	ENSXETG00000020729	rab13	68	36.111
ENSXETG00000031363	-	55	37.607	ENSXETG00000021890	rab11b.2	53	37.607
ENSXETG00000031363	-	78	37.222	ENSXETG00000013633	rab30	89	37.222
ENSXETG00000031363	-	59	40.650	ENSXETG00000008055	rab3b	63	40.650
ENSXETG00000031363	-	59	41.463	ENSXETG00000026943	rab35	61	41.463
ENSXETG00000031363	-	69	40.690	ENSXETG00000004556	rab18	70	40.690
ENSXETG00000031363	-	59	43.089	ENSXETG00000014011	rab1a	61	43.089
ENSXETG00000031363	-	60	36.434	ENSXETG00000014257	mgc75872	66	35.115
ENSXETG00000031363	-	99	78.261	ENSXETG00000030938	rab41	98	78.261
ENSXETG00000031363	-	62	31.111	ENSXETG00000018133	rab9b	67	31.111
ENSXETG00000031363	-	95	30.288	ENSXETG00000032443	RAB39B	98	30.288
ENSXETG00000031363	-	70	30.822	ENSXETG00000014935	ralb	77	30.822
ENSXETG00000031363	-	60	35.878	ENSXETG00000013345	rab9a	64	35.878
ENSXETG00000031363	-	68	39.007	ENSXETG00000002201	rab15	67	39.007
ENSXETG00000031363	-	84	41.143	ENSXETG00000002305	rab5a	81	41.143
ENSXETG00000031363	-	71	32.075	ENSXETG00000005944	rab7b	79	32.075
ENSXETG00000031363	-	58	32.500	ENSXETG00000015712	rabl2b	52	32.500
ENSXETG00000031363	-	91	80.423	ENSXETG00000023200	rab6a	100	80.423
ENSXETG00000031363	-	59	37.398	ENSXETG00000006639	rab11a	57	37.398
ENSXETG00000031363	-	60	44.094	ENSXETG00000016920	rab33b	61	42.446
ENSXETG00000031363	-	63	37.594	ENSXETG00000019257	rab34	51	37.594
ENSXETG00000031363	-	54	36.522	ENSXETG00000025484	rab11b.1	52	36.522
ENSXETG00000031363	-	69	31.034	ENSXETG00000021449	nras	75	31.034
ENSXETG00000031363	-	69	31.034	ENSXETG00000003398	kras	77	31.034
ENSXETG00000031363	-	59	43.089	ENSXETG00000011370	rab35	61	43.089
ENSXETG00000031363	-	61	42.188	ENSXETG00000018183	rab33a	60	42.188
ENSXETG00000031363	-	57	38.333	ENSXETG00000017184	rab2b	56	38.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000031363	-	100	79.327	ENSG00000175582	RAB6A	100	97.674	Homo_sapiens
ENSXETG00000031363	-	99	77.295	ENSAPOG00000005731	rab6a	98	77.295	Acanthochromis_polyacanthus
ENSXETG00000031363	-	100	78.365	ENSAMEG00000017285	RAB6A	82	78.365	Ailuropoda_melanoleuca
ENSXETG00000031363	-	100	76.442	ENSACIG00000014605	rab6a	100	76.442	Amphilophus_citrinellus
ENSXETG00000031363	-	100	77.885	ENSAOCG00000012277	-	100	77.885	Amphiprion_ocellaris
ENSXETG00000031363	-	100	76.442	ENSATEG00000012459	-	100	76.442	Anabas_testudineus
ENSXETG00000031363	-	99	77.295	ENSATEG00000015992	rab41	98	77.295	Anabas_testudineus
ENSXETG00000031363	-	98	76.847	ENSACAG00000015304	-	96	76.699	Anolis_carolinensis
ENSXETG00000031363	-	100	79.808	ENSANAG00000036364	RAB6A	100	79.808	Aotus_nancymaae
ENSXETG00000031363	-	99	77.295	ENSACLG00000019423	rab41	98	77.295	Astatotilapia_calliptera
ENSXETG00000031363	-	100	78.846	ENSAMXG00000032547	rab6a	100	78.846	Astyanax_mexicanus
ENSXETG00000031363	-	99	72.464	ENSAMXG00000033216	rab41	98	72.464	Astyanax_mexicanus
ENSXETG00000031363	-	100	79.808	ENSBTAG00000000025	RAB6A	100	79.808	Bos_taurus
ENSXETG00000031363	-	98	67.476	WBGene00004269	rab-6.1	99	67.476	Caenorhabditis_elegans
ENSXETG00000031363	-	100	79.808	ENSCJAG00000039039	RAB6A	100	79.808	Callithrix_jacchus
ENSXETG00000031363	-	100	77.885	ENSCAFG00000028870	RAB6A	100	77.885	Canis_familiaris
ENSXETG00000031363	-	100	79.808	ENSCAFG00020002206	RAB6A	100	79.808	Canis_lupus_dingo
ENSXETG00000031363	-	100	79.808	ENSCHIG00000023957	RAB6A	100	79.808	Capra_hircus
ENSXETG00000031363	-	100	79.327	ENSTSYG00000013951	RAB6A	100	79.327	Carlito_syrichta
ENSXETG00000031363	-	100	79.808	ENSCATG00000012428	RAB6A	100	79.808	Cercocebus_atys
ENSXETG00000031363	-	100	79.808	ENSCLAG00000015536	RAB6A	100	79.808	Chinchilla_lanigera
ENSXETG00000031363	-	100	79.808	ENSCSAG00000004062	RAB6A	100	79.808	Chlorocebus_sabaeus
ENSXETG00000031363	-	100	68.750	ENSCHOG00000000992	RAB6A	100	68.750	Choloepus_hoffmanni
ENSXETG00000031363	-	100	79.808	ENSCPBG00000000041	RAB6A	100	79.808	Chrysemys_picta_bellii
ENSXETG00000031363	-	98	77.184	ENSCING00000002960	-	99	77.184	Ciona_intestinalis
ENSXETG00000031363	-	98	77.184	ENSCSAVG00000009128	-	99	77.184	Ciona_savignyi
ENSXETG00000031363	-	100	79.808	ENSCANG00000029094	RAB6A	100	79.808	Colobus_angolensis_palliatus
ENSXETG00000031363	-	100	79.808	ENSCGRG00001018153	Rab6a	100	79.808	Cricetulus_griseus_chok1gshd
ENSXETG00000031363	-	99	77.295	ENSCSEG00000004941	rab41	98	77.295	Cynoglossus_semilaevis
ENSXETG00000031363	-	100	76.923	ENSCVAG00000022249	rab6a	100	76.923	Cyprinodon_variegatus
ENSXETG00000031363	-	99	76.812	ENSCVAG00000001618	rab41	98	76.812	Cyprinodon_variegatus
ENSXETG00000031363	-	100	79.327	ENSDARG00000103714	rab6a	100	79.327	Danio_rerio
ENSXETG00000031363	-	99	77.778	ENSDARG00000029885	rab41	98	77.778	Danio_rerio
ENSXETG00000031363	-	100	80.288	ENSDNOG00000042746	RAB6A	100	80.288	Dasypus_novemcinctus
ENSXETG00000031363	-	100	79.808	ENSDORG00000027784	Rab6a	100	79.808	Dipodomys_ordii
ENSXETG00000031363	-	99	74.879	FBgn0015797	Rab6	99	74.879	Drosophila_melanogaster
ENSXETG00000031363	-	100	68.750	ENSETEG00000009412	-	100	68.750	Echinops_telfairi
ENSXETG00000031363	-	100	79.808	ENSEASG00005017944	RAB6A	100	79.808	Equus_asinus_asinus
ENSXETG00000031363	-	100	79.808	ENSECAG00000022694	-	100	79.808	Equus_caballus
ENSXETG00000031363	-	100	77.885	ENSELUG00000008876	rab6a	100	77.885	Esox_lucius
ENSXETG00000031363	-	100	79.808	ENSFCAG00000023834	RAB6A	100	79.808	Felis_catus
ENSXETG00000031363	-	100	78.365	ENSFALG00000008011	RAB6A	100	78.365	Ficedula_albicollis
ENSXETG00000031363	-	100	79.808	ENSFDAG00000010948	-	100	79.808	Fukomys_damarensis
ENSXETG00000031363	-	99	75.845	ENSGMOG00000004095	rab41	98	75.845	Gadus_morhua
ENSXETG00000031363	-	100	78.846	ENSGALG00000017320	RAB6A	100	78.846	Gallus_gallus
ENSXETG00000031363	-	99	79.126	ENSGALG00000026278	-	98	79.126	Gallus_gallus
ENSXETG00000031363	-	99	76.329	ENSGAFG00000019872	rab41	98	76.329	Gambusia_affinis
ENSXETG00000031363	-	100	76.923	ENSGAFG00000006356	rab6a	100	76.923	Gambusia_affinis
ENSXETG00000031363	-	99	77.295	ENSGACG00000017153	rab41	98	77.295	Gasterosteus_aculeatus
ENSXETG00000031363	-	100	76.442	ENSGACG00000020356	rab6a	100	76.442	Gasterosteus_aculeatus
ENSXETG00000031363	-	100	79.808	ENSGAGG00000021701	RAB6A	100	79.808	Gopherus_agassizii
ENSXETG00000031363	-	100	79.327	ENSGGOG00000010610	RAB6A	100	79.327	Gorilla_gorilla
ENSXETG00000031363	-	100	76.442	ENSHBUG00000000890	rab6a	100	76.442	Haplochromis_burtoni
ENSXETG00000031363	-	100	79.808	ENSHGLG00000008829	-	100	79.808	Heterocephalus_glaber_female
ENSXETG00000031363	-	100	78.846	ENSHGLG00100014550	-	100	78.846	Heterocephalus_glaber_male
ENSXETG00000031363	-	99	77.295	ENSHCOG00000004404	rab41	98	77.295	Hippocampus_comes
ENSXETG00000031363	-	100	75.962	ENSHCOG00000006550	-	100	75.962	Hippocampus_comes
ENSXETG00000031363	-	100	77.404	ENSIPUG00000021740	rab6a	100	77.404	Ictalurus_punctatus
ENSXETG00000031363	-	99	77.778	ENSIPUG00000019382	rab41	98	77.778	Ictalurus_punctatus
ENSXETG00000031363	-	100	79.808	ENSSTOG00000023497	RAB6A	100	79.808	Ictidomys_tridecemlineatus
ENSXETG00000031363	-	74	86.364	ENSKMAG00000013146	-	80	86.364	Kryptolebias_marmoratus
ENSXETG00000031363	-	100	76.442	ENSLBEG00000003748	rab6a	100	76.442	Labrus_bergylta
ENSXETG00000031363	-	99	79.126	ENSLACG00000013980	rab41	98	79.126	Latimeria_chalumnae
ENSXETG00000031363	-	100	77.404	ENSLACG00000005168	RAB6A	100	77.404	Latimeria_chalumnae
ENSXETG00000031363	-	99	77.778	ENSLOCG00000015191	rab41	98	77.778	Lepisosteus_oculatus
ENSXETG00000031363	-	100	79.808	ENSMFAG00000041027	RAB6A	100	79.808	Macaca_fascicularis
ENSXETG00000031363	-	100	79.808	ENSMNEG00000029216	RAB6A	100	79.808	Macaca_nemestrina
ENSXETG00000031363	-	100	79.808	ENSMLEG00000038771	RAB6A	100	79.808	Mandrillus_leucophaeus
ENSXETG00000031363	-	99	74.879	ENSMAMG00000020859	rab41	98	74.879	Mastacembelus_armatus
ENSXETG00000031363	-	100	76.442	ENSMAMG00000012488	rab6a	100	76.442	Mastacembelus_armatus
ENSXETG00000031363	-	100	76.442	ENSMZEG00005023181	rab6a	100	76.442	Maylandia_zebra
ENSXETG00000031363	-	100	79.808	ENSMICG00000031565	RAB6A	100	79.808	Microcebus_murinus
ENSXETG00000031363	-	100	79.808	ENSMOCG00000014387	Rab6a	100	79.808	Microtus_ochrogaster
ENSXETG00000031363	-	100	75.481	ENSMMOG00000016209	rab6a	100	75.481	Mola_mola
ENSXETG00000031363	-	92	78.534	ENSMMOG00000001992	rab41	87	78.534	Mola_mola
ENSXETG00000031363	-	100	80.769	ENSMODG00000007600	RAB6A	100	80.769	Monodelphis_domestica
ENSXETG00000031363	-	99	77.295	ENSMALG00000010549	rab41	98	77.295	Monopterus_albus
ENSXETG00000031363	-	100	76.923	ENSMALG00000020364	-	100	76.923	Monopterus_albus
ENSXETG00000031363	-	100	79.808	MGP_CAROLIEiJ_G0030051	Rab6a	100	79.808	Mus_caroli
ENSXETG00000031363	-	100	79.808	ENSMUSG00000030704	Rab6a	100	79.808	Mus_musculus
ENSXETG00000031363	-	100	79.808	MGP_PahariEiJ_G0013273	Rab6a	100	79.808	Mus_pahari
ENSXETG00000031363	-	100	79.808	MGP_SPRETEiJ_G0031162	Rab6a	100	79.808	Mus_spretus
ENSXETG00000031363	-	100	79.808	ENSMPUG00000009724	RAB6A	100	79.808	Mustela_putorius_furo
ENSXETG00000031363	-	100	79.327	ENSNGAG00000014566	Rab6a	100	79.327	Nannospalax_galili
ENSXETG00000031363	-	100	76.442	ENSNBRG00000016716	rab6a	100	76.442	Neolamprologus_brichardi
ENSXETG00000031363	-	99	77.295	ENSNBRG00000022702	rab41	98	77.295	Neolamprologus_brichardi
ENSXETG00000031363	-	100	79.808	ENSNLEG00000017098	RAB6A	100	79.808	Nomascus_leucogenys
ENSXETG00000031363	-	100	80.769	ENSMEUG00000010026	RAB6A	100	80.769	Notamacropus_eugenii
ENSXETG00000031363	-	91	79.365	ENSOPRG00000010355	RAB6A	100	79.365	Ochotona_princeps
ENSXETG00000031363	-	100	79.808	ENSODEG00000005942	RAB6A	100	79.808	Octodon_degus
ENSXETG00000031363	-	100	76.442	ENSONIG00000004394	rab6a	100	76.442	Oreochromis_niloticus
ENSXETG00000031363	-	100	78.365	ENSOCUG00000009297	RAB6A	100	78.365	Oryctolagus_cuniculus
ENSXETG00000031363	-	100	77.209	ENSORLG00000000937	-	100	77.209	Oryzias_latipes
ENSXETG00000031363	-	100	76.442	ENSORLG00000026197	rab6a	100	76.442	Oryzias_latipes
ENSXETG00000031363	-	99	75.362	ENSORLG00020000604	rab41	98	75.362	Oryzias_latipes_hni
ENSXETG00000031363	-	100	76.442	ENSORLG00020001816	rab6a	100	76.442	Oryzias_latipes_hni
ENSXETG00000031363	-	100	76.442	ENSORLG00015006162	rab6a	100	76.442	Oryzias_latipes_hsok
ENSXETG00000031363	-	100	76.442	ENSOMEG00000004379	-	100	76.442	Oryzias_melastigma
ENSXETG00000031363	-	100	78.846	ENSOGAG00000027043	RAB6A	100	78.846	Otolemur_garnettii
ENSXETG00000031363	-	100	79.808	ENSOARG00000007994	RAB6A	100	79.808	Ovis_aries
ENSXETG00000031363	-	100	79.327	ENSPPAG00000011436	RAB6A	100	79.327	Pan_paniscus
ENSXETG00000031363	-	100	79.808	ENSPPRG00000009543	RAB6A	100	79.808	Panthera_pardus
ENSXETG00000031363	-	100	79.327	ENSPTRG00000044137	RAB6A	100	79.327	Pan_troglodytes
ENSXETG00000031363	-	100	79.808	ENSPANG00000014356	RAB6A	100	79.808	Papio_anubis
ENSXETG00000031363	-	99	76.699	ENSPKIG00000018584	rab41	98	76.699	Paramormyrops_kingsleyae
ENSXETG00000031363	-	100	75.000	ENSPMGG00000010067	-	100	75.000	Periophthalmus_magnuspinnatus
ENSXETG00000031363	-	100	76.923	ENSPFOG00000019509	rab6a	100	76.923	Poecilia_formosa
ENSXETG00000031363	-	99	77.295	ENSPLAG00000000376	rab41	98	77.295	Poecilia_latipinna
ENSXETG00000031363	-	100	76.923	ENSPLAG00000019570	rab6a	100	76.923	Poecilia_latipinna
ENSXETG00000031363	-	99	77.295	ENSPMEG00000014170	rab41	98	77.295	Poecilia_mexicana
ENSXETG00000031363	-	100	76.923	ENSPMEG00000003369	rab6a	100	76.923	Poecilia_mexicana
ENSXETG00000031363	-	100	76.923	ENSPREG00000021505	rab6a	100	76.923	Poecilia_reticulata
ENSXETG00000031363	-	100	79.327	ENSPPYG00000003663	RAB6A	100	79.327	Pongo_abelii
ENSXETG00000031363	-	89	81.183	ENSPCAG00000006752	RAB6A	99	81.183	Procavia_capensis
ENSXETG00000031363	-	100	79.808	ENSPCOG00000021991	RAB6A	100	79.808	Propithecus_coquereli
ENSXETG00000031363	-	100	79.808	ENSPVAG00000017342	RAB6A	100	79.808	Pteropus_vampyrus
ENSXETG00000031363	-	100	76.442	ENSPNYG00000020556	rab6a	100	76.442	Pundamilia_nyererei
ENSXETG00000031363	-	99	77.295	ENSPNYG00000013288	rab41	98	77.295	Pundamilia_nyererei
ENSXETG00000031363	-	99	77.778	ENSPNAG00000021737	rab41	98	77.778	Pygocentrus_nattereri
ENSXETG00000031363	-	100	79.808	ENSRNOG00000018176	Rab6a	100	79.808	Rattus_norvegicus
ENSXETG00000031363	-	100	79.808	ENSRBIG00000030390	RAB6A	100	79.808	Rhinopithecus_bieti
ENSXETG00000031363	-	100	79.808	ENSRROG00000042103	RAB6A	100	79.808	Rhinopithecus_roxellana
ENSXETG00000031363	-	100	75.962	ENSSBOG00000028389	RAB6A	100	75.962	Saimiri_boliviensis_boliviensis
ENSXETG00000031363	-	100	78.365	ENSSFOG00015002077	rab6a	100	78.365	Scleropages_formosus
ENSXETG00000031363	-	98	77.340	ENSSFOG00015004941	rab41	96	77.184	Scleropages_formosus
ENSXETG00000031363	-	100	75.000	ENSSMAG00000017205	-	100	75.000	Scophthalmus_maximus
ENSXETG00000031363	-	99	77.295	ENSSMAG00000015774	rab41	98	77.295	Scophthalmus_maximus
ENSXETG00000031363	-	100	76.923	ENSSDUG00000013496	-	100	76.923	Seriola_dumerili
ENSXETG00000031363	-	99	75.845	ENSSLDG00000022282	rab41	98	75.845	Seriola_lalandi_dorsalis
ENSXETG00000031363	-	100	76.923	ENSSLDG00000015289	-	100	76.923	Seriola_lalandi_dorsalis
ENSXETG00000031363	-	99	79.126	ENSSPUG00000001533	-	98	79.126	Sphenodon_punctatus
ENSXETG00000031363	-	100	80.769	ENSSPUG00000017301	RAB6A	100	80.769	Sphenodon_punctatus
ENSXETG00000031363	-	100	77.404	ENSSPAG00000001067	-	100	77.404	Stegastes_partitus
ENSXETG00000031363	-	99	75.845	ENSSPAG00000006001	rab41	98	75.845	Stegastes_partitus
ENSXETG00000031363	-	100	79.808	ENSSSCG00000014828	RAB6A	100	79.808	Sus_scrofa
ENSXETG00000031363	-	100	79.808	ENSTGUG00000013470	RAB6A	100	79.808	Taeniopygia_guttata
ENSXETG00000031363	-	99	77.295	ENSTRUG00000009223	rab41	98	77.295	Takifugu_rubripes
ENSXETG00000031363	-	100	76.442	ENSTRUG00000023252	rab6a	100	76.442	Takifugu_rubripes
ENSXETG00000031363	-	100	79.327	ENSTTRG00000005374	RAB6A	100	79.327	Tursiops_truncatus
ENSXETG00000031363	-	100	75.962	ENSUMAG00000010248	RAB6A	100	75.962	Ursus_maritimus
ENSXETG00000031363	-	100	79.808	ENSVVUG00000024550	RAB6A	100	79.808	Vulpes_vulpes
ENSXETG00000031363	-	100	76.923	ENSXCOG00000006259	rab6a	100	76.923	Xiphophorus_couchianus
ENSXETG00000031363	-	100	76.923	ENSXMAG00000011903	rab6a	100	76.923	Xiphophorus_maculatus