EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000031652 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 13384 bases
Position: chrGL172749.1:706076-719459
Accession: 100489047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000058693	MRP-S27	PF10037.9	8.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000061178	PTCD2-201	1149	-	ENSXETP00000058693	382 (aa)	XP_002934867	F6W0A0

Gene Model

Click here to download ENSXETG00000031652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000031652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000031652	PTCD2	92	52.707	ENSG00000049883	PTCD2	100	46.734	Homo_sapiens
ENSXETG00000031652	PTCD2	95	45.455	ENSAPOG00000020682	ptcd2	97	45.455	Acanthochromis_polyacanthus
ENSXETG00000031652	PTCD2	94	52.222	ENSAMEG00000007194	PTCD2	93	52.222	Ailuropoda_melanoleuca
ENSXETG00000031652	PTCD2	91	42.286	ENSACIG00000002053	ptcd2	100	42.286	Amphilophus_citrinellus
ENSXETG00000031652	PTCD2	91	47.126	ENSAOCG00000006616	ptcd2	89	47.126	Amphiprion_ocellaris
ENSXETG00000031652	PTCD2	91	47.701	ENSAPEG00000022926	ptcd2	89	47.701	Amphiprion_percula
ENSXETG00000031652	PTCD2	99	55.208	ENSACAG00000009747	PTCD2	97	55.208	Anolis_carolinensis
ENSXETG00000031652	PTCD2	94	52.222	ENSANAG00000029353	PTCD2	93	52.222	Aotus_nancymaae
ENSXETG00000031652	PTCD2	91	44.857	ENSACLG00000027742	ptcd2	89	44.857	Astatotilapia_calliptera
ENSXETG00000031652	PTCD2	92	41.026	ENSAMXG00000029404	ptcd2	93	41.026	Astyanax_mexicanus
ENSXETG00000031652	PTCD2	97	50.802	ENSBTAG00000014675	PTCD2	97	50.802	Bos_taurus
ENSXETG00000031652	PTCD2	94	51.667	ENSCJAG00000016364	PTCD2	93	51.667	Callithrix_jacchus
ENSXETG00000031652	PTCD2	95	51.467	ENSCAFG00000007982	PTCD2	88	51.467	Canis_familiaris
ENSXETG00000031652	PTCD2	91	52.738	ENSCAFG00020019147	PTCD2	97	52.738	Canis_lupus_dingo
ENSXETG00000031652	PTCD2	94	51.389	ENSCHIG00000017118	PTCD2	93	51.389	Capra_hircus
ENSXETG00000031652	PTCD2	95	49.311	ENSCPOG00000040168	PTCD2	95	49.311	Cavia_porcellus
ENSXETG00000031652	PTCD2	77	52.685	ENSCCAG00000021996	-	92	52.685	Cebus_capucinus
ENSXETG00000031652	PTCD2	94	50.970	ENSCCAG00000029389	-	93	50.970	Cebus_capucinus
ENSXETG00000031652	PTCD2	94	52.925	ENSCATG00000019069	PTCD2	93	52.925	Cercocebus_atys
ENSXETG00000031652	PTCD2	98	50.390	ENSCLAG00000000072	PTCD2	99	50.390	Chinchilla_lanigera
ENSXETG00000031652	PTCD2	92	54.131	ENSCSAG00000015623	PTCD2	94	53.333	Chlorocebus_sabaeus
ENSXETG00000031652	PTCD2	74	59.412	ENSCHOG00000010634	PTCD2	82	59.412	Choloepus_hoffmanni
ENSXETG00000031652	PTCD2	100	51.562	ENSCPBG00000000216	PTCD2	98	51.562	Chrysemys_picta_bellii
ENSXETG00000031652	PTCD2	92	53.846	ENSCANG00000035636	PTCD2	90	53.846	Colobus_angolensis_palliatus
ENSXETG00000031652	PTCD2	92	54.701	ENSCGRG00001015289	Ptcd2	77	54.701	Cricetulus_griseus_chok1gshd
ENSXETG00000031652	PTCD2	92	54.701	ENSCGRG00000006193	Ptcd2	77	54.701	Cricetulus_griseus_crigri
ENSXETG00000031652	PTCD2	100	44.388	ENSCVAG00000001285	ptcd2	98	44.388	Cyprinodon_variegatus
ENSXETG00000031652	PTCD2	100	44.301	ENSDARG00000035391	ptcd2	100	44.301	Danio_rerio
ENSXETG00000031652	PTCD2	94	52.909	ENSDNOG00000008719	PTCD2	94	52.909	Dasypus_novemcinctus
ENSXETG00000031652	PTCD2	92	52.975	ENSDORG00000004921	Ptcd2	91	52.975	Dipodomys_ordii
ENSXETG00000031652	PTCD2	92	49.432	ENSETEG00000016542	PTCD2	90	49.432	Echinops_telfairi
ENSXETG00000031652	PTCD2	99	50.000	ENSEASG00005018038	PTCD2	100	50.000	Equus_asinus_asinus
ENSXETG00000031652	PTCD2	95	51.087	ENSECAG00000007022	PTCD2	95	51.087	Equus_caballus
ENSXETG00000031652	PTCD2	94	52.486	ENSEEUG00000014031	PTCD2	92	52.486	Erinaceus_europaeus
ENSXETG00000031652	PTCD2	95	44.932	ENSELUG00000003584	ptcd2	95	44.932	Esox_lucius
ENSXETG00000031652	PTCD2	82	53.822	ENSFCAG00000045432	PTCD2	73	53.822	Felis_catus
ENSXETG00000031652	PTCD2	84	48.758	ENSFALG00000010299	PTCD2	98	48.758	Ficedula_albicollis
ENSXETG00000031652	PTCD2	94	53.333	ENSFDAG00000018461	PTCD2	94	53.333	Fukomys_damarensis
ENSXETG00000031652	PTCD2	92	48.305	ENSGMOG00000003637	ptcd2	91	48.305	Gadus_morhua
ENSXETG00000031652	PTCD2	92	47.578	ENSGALG00000038260	PTCD2	100	46.073	Gallus_gallus
ENSXETG00000031652	PTCD2	100	57.031	ENSGAGG00000021952	PTCD2	98	57.031	Gopherus_agassizii
ENSXETG00000031652	PTCD2	92	52.707	ENSGGOG00000010695	PTCD2	90	52.707	Gorilla_gorilla
ENSXETG00000031652	PTCD2	91	44.857	ENSHBUG00000009191	ptcd2	89	44.857	Haplochromis_burtoni
ENSXETG00000031652	PTCD2	92	52.137	ENSHGLG00000001234	PTCD2	91	52.137	Heterocephalus_glaber_female
ENSXETG00000031652	PTCD2	92	52.137	ENSHGLG00100015419	PTCD2	91	52.137	Heterocephalus_glaber_male
ENSXETG00000031652	PTCD2	91	48.442	ENSHCOG00000001703	ptcd2	90	48.442	Hippocampus_comes
ENSXETG00000031652	PTCD2	84	46.250	ENSIPUG00000006080	ptcd2	91	45.845	Ictalurus_punctatus
ENSXETG00000031652	PTCD2	92	54.830	ENSSTOG00000006596	PTCD2	92	54.830	Ictidomys_tridecemlineatus
ENSXETG00000031652	PTCD2	94	53.315	ENSJJAG00000024388	Ptcd2	94	53.315	Jaculus_jaculus
ENSXETG00000031652	PTCD2	98	43.117	ENSKMAG00000009329	ptcd2	99	43.117	Kryptolebias_marmoratus
ENSXETG00000031652	PTCD2	100	46.114	ENSLBEG00000024871	ptcd2	98	46.114	Labrus_bergylta
ENSXETG00000031652	PTCD2	100	52.987	ENSLOCG00000011122	ptcd2	100	52.987	Lepisosteus_oculatus
ENSXETG00000031652	PTCD2	73	58.123	ENSLAFG00000004115	PTCD2	92	57.143	Loxodonta_africana
ENSXETG00000031652	PTCD2	92	53.846	ENSMFAG00000031516	PTCD2	90	53.846	Macaca_fascicularis
ENSXETG00000031652	PTCD2	92	54.131	ENSMNEG00000007537	PTCD2	91	54.131	Macaca_nemestrina
ENSXETG00000031652	PTCD2	92	53.846	ENSMLEG00000031093	PTCD2	90	53.846	Mandrillus_leucophaeus
ENSXETG00000031652	PTCD2	91	50.000	ENSMAMG00000018529	ptcd2	91	50.000	Mastacembelus_armatus
ENSXETG00000031652	PTCD2	91	44.857	ENSMZEG00005003625	ptcd2	89	44.857	Maylandia_zebra
ENSXETG00000031652	PTCD2	91	48.424	ENSMGAG00000005033	PTCD2	100	48.424	Meleagris_gallopavo
ENSXETG00000031652	PTCD2	92	42.898	ENSMAUG00000020253	Ptcd2	90	42.898	Mesocricetus_auratus
ENSXETG00000031652	PTCD2	94	50.833	ENSMICG00000004535	PTCD2	93	50.833	Microcebus_murinus
ENSXETG00000031652	PTCD2	92	53.561	ENSMOCG00000019985	Ptcd2	92	53.561	Microtus_ochrogaster
ENSXETG00000031652	PTCD2	92	53.429	ENSMODG00000001695	PTCD2	91	53.429	Monodelphis_domestica
ENSXETG00000031652	PTCD2	100	46.094	ENSMALG00000022372	ptcd2	100	46.094	Monopterus_albus
ENSXETG00000031652	PTCD2	94	55.153	MGP_CAROLIEiJ_G0018829	Ptcd2	94	55.153	Mus_caroli
ENSXETG00000031652	PTCD2	94	55.153	ENSMUSG00000021650	Ptcd2	94	55.153	Mus_musculus
ENSXETG00000031652	PTCD2	94	54.318	MGP_PahariEiJ_G0015904	Ptcd2	94	54.318	Mus_pahari
ENSXETG00000031652	PTCD2	94	55.989	MGP_SPRETEiJ_G0019711	Ptcd2	94	55.989	Mus_spretus
ENSXETG00000031652	PTCD2	94	52.500	ENSMPUG00000014401	PTCD2	94	52.500	Mustela_putorius_furo
ENSXETG00000031652	PTCD2	92	53.276	ENSMLUG00000007374	PTCD2	93	52.778	Myotis_lucifugus
ENSXETG00000031652	PTCD2	94	51.524	ENSNGAG00000005027	Ptcd2	94	51.524	Nannospalax_galili
ENSXETG00000031652	PTCD2	91	45.143	ENSNBRG00000008174	ptcd2	91	45.143	Neolamprologus_brichardi
ENSXETG00000031652	PTCD2	87	45.015	ENSNBRG00000000092	-	100	45.015	Neolamprologus_brichardi
ENSXETG00000031652	PTCD2	92	53.561	ENSNLEG00000004516	PTCD2	90	53.561	Nomascus_leucogenys
ENSXETG00000031652	PTCD2	82	43.810	ENSMEUG00000014012	-	82	43.810	Notamacropus_eugenii
ENSXETG00000031652	PTCD2	99	49.868	ENSOPRG00000007290	PTCD2	96	49.868	Ochotona_princeps
ENSXETG00000031652	PTCD2	94	53.760	ENSODEG00000016417	PTCD2	93	53.760	Octodon_degus
ENSXETG00000031652	PTCD2	72	47.273	ENSONIG00000011269	ptcd2	81	47.273	Oreochromis_niloticus
ENSXETG00000031652	PTCD2	94	51.253	ENSOCUG00000007970	PTCD2	93	51.253	Oryctolagus_cuniculus
ENSXETG00000031652	PTCD2	91	46.286	ENSORLG00000003851	ptcd2	88	46.286	Oryzias_latipes
ENSXETG00000031652	PTCD2	91	46.000	ENSORLG00020009823	ptcd2	90	46.000	Oryzias_latipes_hni
ENSXETG00000031652	PTCD2	92	46.944	ENSORLG00015016777	ptcd2	100	47.222	Oryzias_latipes_hsok
ENSXETG00000031652	PTCD2	100	43.041	ENSOMEG00000012396	ptcd2	93	43.041	Oryzias_melastigma
ENSXETG00000031652	PTCD2	96	49.733	ENSOGAG00000008390	PTCD2	96	49.733	Otolemur_garnettii
ENSXETG00000031652	PTCD2	94	50.556	ENSOARG00000005087	PTCD2	92	50.556	Ovis_aries
ENSXETG00000031652	PTCD2	92	52.707	ENSPPAG00000028480	PTCD2	90	52.707	Pan_paniscus
ENSXETG00000031652	PTCD2	92	52.422	ENSPTRG00000016968	PTCD2	90	52.422	Pan_troglodytes
ENSXETG00000031652	PTCD2	91	54.046	ENSPANG00000006611	PTCD2	89	54.046	Papio_anubis
ENSXETG00000031652	PTCD2	100	46.094	ENSPKIG00000019896	ptcd2	100	46.094	Paramormyrops_kingsleyae
ENSXETG00000031652	PTCD2	83	59.875	ENSPSIG00000014559	PTCD2	99	59.875	Pelodiscus_sinensis
ENSXETG00000031652	PTCD2	92	55.524	ENSPEMG00000000884	Ptcd2	92	55.524	Peromyscus_maniculatus_bairdii
ENSXETG00000031652	PTCD2	92	52.809	ENSPCIG00000029047	PTCD2	92	52.809	Phascolarctos_cinereus
ENSXETG00000031652	PTCD2	92	43.288	ENSPLAG00000010456	ptcd2	100	43.434	Poecilia_latipinna
ENSXETG00000031652	PTCD2	100	43.846	ENSPREG00000021797	ptcd2	98	43.846	Poecilia_reticulata
ENSXETG00000031652	PTCD2	92	45.299	ENSPPYG00000015543	PTCD2	89	45.299	Pongo_abelii
ENSXETG00000031652	PTCD2	80	45.066	ENSPCAG00000006806	PTCD2	94	45.066	Procavia_capensis
ENSXETG00000031652	PTCD2	94	49.861	ENSPVAG00000010935	PTCD2	93	49.861	Pteropus_vampyrus
ENSXETG00000031652	PTCD2	91	44.857	ENSPNYG00000003122	ptcd2	89	44.857	Pundamilia_nyererei
ENSXETG00000031652	PTCD2	100	47.927	ENSPNAG00000021490	ptcd2	100	48.579	Pygocentrus_nattereri
ENSXETG00000031652	PTCD2	94	55.556	ENSRNOG00000028403	Ptcd2	94	55.556	Rattus_norvegicus
ENSXETG00000031652	PTCD2	92	48.718	ENSRBIG00000032929	PTCD2	90	48.718	Rhinopithecus_bieti
ENSXETG00000031652	PTCD2	92	53.561	ENSRROG00000000080	PTCD2	91	53.561	Rhinopithecus_roxellana
ENSXETG00000031652	PTCD2	94	51.111	ENSSBOG00000018911	PTCD2	94	51.111	Saimiri_boliviensis_boliviensis
ENSXETG00000031652	PTCD2	100	51.938	ENSSHAG00000003833	PTCD2	99	51.938	Sarcophilus_harrisii
ENSXETG00000031652	PTCD2	94	49.167	ENSSFOG00015015415	ptcd2	93	49.167	Scleropages_formosus
ENSXETG00000031652	PTCD2	91	45.115	ENSSMAG00000010350	ptcd2	90	45.115	Scophthalmus_maximus
ENSXETG00000031652	PTCD2	91	50.000	ENSSDUG00000008142	ptcd2	86	50.000	Seriola_dumerili
ENSXETG00000031652	PTCD2	91	50.000	ENSSLDG00000015284	ptcd2	91	50.000	Seriola_lalandi_dorsalis
ENSXETG00000031652	PTCD2	74	49.648	ENSSARG00000004983	PTCD2	91	49.648	Sorex_araneus
ENSXETG00000031652	PTCD2	95	52.055	ENSSPUG00000000176	PTCD2	92	52.055	Sphenodon_punctatus
ENSXETG00000031652	PTCD2	95	44.385	ENSSPAG00000008591	ptcd2	96	44.385	Stegastes_partitus
ENSXETG00000031652	PTCD2	92	51.282	ENSSSCG00000016975	PTCD2	82	51.282	Sus_scrofa
ENSXETG00000031652	PTCD2	83	52.215	ENSTGUG00000005705	PTCD2	91	52.215	Taeniopygia_guttata
ENSXETG00000031652	PTCD2	94	51.247	ENSTBEG00000016559	PTCD2	93	51.247	Tupaia_belangeri
ENSXETG00000031652	PTCD2	92	51.282	ENSTTRG00000011851	PTCD2	90	51.282	Tursiops_truncatus
ENSXETG00000031652	PTCD2	94	51.667	ENSUAMG00000007583	PTCD2	84	51.667	Ursus_americanus
ENSXETG00000031652	PTCD2	92	52.557	ENSUMAG00000007666	PTCD2	92	52.557	Ursus_maritimus
ENSXETG00000031652	PTCD2	98	47.884	ENSVPAG00000009597	PTCD2	97	47.884	Vicugna_pacos
ENSXETG00000031652	PTCD2	92	52.707	ENSVVUG00000007299	-	98	51.467	Vulpes_vulpes
ENSXETG00000031652	PTCD2	92	44.262	ENSXMAG00000005940	ptcd2	91	44.584	Xiphophorus_maculatus