EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000031661 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 16618 bases
Position: chrGL172721.1:462879-479496
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000059868	RTC	PF01137.21	1.8e-71	1	1
ENSXETP00000061809	RTC	PF01137.21	1.1e-66	1	1
ENSXETP00000061809	RTC_insert	PF05189.13	2.2e-20	1	1
ENSXETP00000059868	RTC_insert	PF05189.13	2.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000065165	RTCA-201	1104	-	ENSXETP00000059868	367 (aa)	-	F7EPH8
ENSXETT00000062984	RTCA-202	948	-	ENSXETP00000061809	315 (aa)	-	F6QGM6

Gene Model

Click here to download ENSXETG00000031661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000031661's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000031661	RTCA	99	64.850	ENSG00000137996	RTCA	96	74.468	Homo_sapiens
ENSXETG00000031661	RTCA	98	57.851	ENSAPOG00000001345	rtca	98	57.851	Acanthochromis_polyacanthus
ENSXETG00000031661	RTCA	73	61.852	ENSAMEG00000008855	RTCA	99	61.852	Ailuropoda_melanoleuca
ENSXETG00000031661	RTCA	98	58.172	ENSACIG00000019643	rtca	98	58.172	Amphilophus_citrinellus
ENSXETG00000031661	RTCA	99	57.221	ENSAOCG00000014979	rtca	99	57.221	Amphiprion_ocellaris
ENSXETG00000031661	RTCA	99	57.221	ENSAPEG00000006945	rtca	99	57.221	Amphiprion_percula
ENSXETG00000031661	RTCA	99	55.301	ENSATEG00000006315	rtca	96	56.941	Anabas_testudineus
ENSXETG00000031661	RTCA	99	60.227	ENSAPLG00000015430	RTCA	99	61.798	Anas_platyrhynchos
ENSXETG00000031661	RTCA	99	65.123	ENSANAG00000025446	RTCA	99	65.123	Aotus_nancymaae
ENSXETG00000031661	RTCA	99	58.038	ENSACLG00000020770	rtca	99	58.038	Astatotilapia_calliptera
ENSXETG00000031661	RTCA	99	59.066	ENSAMXG00000043271	rtca	99	59.066	Astyanax_mexicanus
ENSXETG00000031661	RTCA	99	65.940	ENSBTAG00000006321	RTCA	99	65.940	Bos_taurus
ENSXETG00000031661	RTCA	99	65.123	ENSCJAG00000003398	RTCA	99	65.123	Callithrix_jacchus
ENSXETG00000031661	RTCA	99	65.479	ENSCAFG00000020010	RTCA	67	65.479	Canis_familiaris
ENSXETG00000031661	RTCA	99	65.479	ENSCAFG00020011528	RTCA	56	65.479	Canis_lupus_dingo
ENSXETG00000031661	RTCA	99	65.940	ENSCHIG00000018937	RTCA	99	65.940	Capra_hircus
ENSXETG00000031661	RTCA	99	64.384	ENSTSYG00000011305	RTCA	99	64.384	Carlito_syrichta
ENSXETG00000031661	RTCA	99	64.850	ENSCCAG00000021844	RTCA	99	65.672	Cebus_capucinus
ENSXETG00000031661	RTCA	99	62.895	ENSCATG00000019364	RTCA	99	63.023	Cercocebus_atys
ENSXETG00000031661	RTCA	89	61.076	ENSCLAG00000006125	RTCA	99	63.636	Chinchilla_lanigera
ENSXETG00000031661	RTCA	99	65.123	ENSCSAG00000001509	RTCA	99	65.123	Chlorocebus_sabaeus
ENSXETG00000031661	RTCA	99	65.123	ENSCHOG00000005211	RTCA	99	65.123	Choloepus_hoffmanni
ENSXETG00000031661	RTCA	99	63.014	ENSCPBG00000026658	RTCA	99	63.014	Chrysemys_picta_bellii
ENSXETG00000031661	RTCA	99	49.176	ENSCING00000007875	-	99	49.176	Ciona_intestinalis
ENSXETG00000031661	RTCA	99	47.527	ENSCSAVG00000007269	-	99	47.527	Ciona_savignyi
ENSXETG00000031661	RTCA	99	64.850	ENSCANG00000040106	RTCA	99	64.850	Colobus_angolensis_palliatus
ENSXETG00000031661	RTCA	73	62.593	ENSCGRG00001013163	Rtca	84	62.593	Cricetulus_griseus_chok1gshd
ENSXETG00000031661	RTCA	98	58.380	ENSCSEG00000000530	rtca	95	58.380	Cynoglossus_semilaevis
ENSXETG00000031661	RTCA	99	44.565	ENSCVAG00000021809	rtca	99	44.565	Cyprinodon_variegatus
ENSXETG00000031661	RTCA	98	58.449	ENSDARG00000002215	rtca	98	58.449	Danio_rerio
ENSXETG00000031661	RTCA	99	64.305	ENSDNOG00000000456	RTCA	99	64.305	Dasypus_novemcinctus
ENSXETG00000031661	RTCA	99	66.027	ENSDORG00000005448	Rtca	99	66.027	Dipodomys_ordii
ENSXETG00000031661	RTCA	98	36.842	FBgn0025630	Rtca	98	36.842	Drosophila_melanogaster
ENSXETG00000031661	RTCA	95	45.597	ENSEBUG00000008556	rtca	95	45.584	Eptatretus_burgeri
ENSXETG00000031661	RTCA	99	65.395	ENSEASG00005015926	RTCA	99	65.395	Equus_asinus_asinus
ENSXETG00000031661	RTCA	99	65.395	ENSECAG00000019831	RTCA	99	65.395	Equus_caballus
ENSXETG00000031661	RTCA	91	56.609	ENSEEUG00000001165	RTCA	99	56.609	Erinaceus_europaeus
ENSXETG00000031661	RTCA	98	59.116	ENSELUG00000003741	rtca	98	59.116	Esox_lucius
ENSXETG00000031661	RTCA	99	65.479	ENSFCAG00000024460	RTCA	99	65.479	Felis_catus
ENSXETG00000031661	RTCA	93	62.974	ENSFALG00000002443	RTCA	91	62.974	Ficedula_albicollis
ENSXETG00000031661	RTCA	98	54.740	ENSFDAG00000016084	-	99	52.486	Fukomys_damarensis
ENSXETG00000031661	RTCA	99	64.305	ENSFDAG00000012070	-	99	64.305	Fukomys_damarensis
ENSXETG00000031661	RTCA	50	56.593	ENSFHEG00000002868	rtca	84	53.535	Fundulus_heteroclitus
ENSXETG00000031661	RTCA	99	54.795	ENSGMOG00000013264	rtca	99	54.795	Gadus_morhua
ENSXETG00000031661	RTCA	99	63.215	ENSGALG00000005277	RTCA	99	63.215	Gallus_gallus
ENSXETG00000031661	RTCA	99	57.766	ENSGAFG00000011853	rtca	99	57.766	Gambusia_affinis
ENSXETG00000031661	RTCA	98	57.618	ENSGACG00000013497	rtca	98	57.618	Gasterosteus_aculeatus
ENSXETG00000031661	RTCA	81	62.162	ENSGAGG00000023306	RTCA	99	62.162	Gopherus_agassizii
ENSXETG00000031661	RTCA	99	64.850	ENSGGOG00000044018	-	99	64.850	Gorilla_gorilla
ENSXETG00000031661	RTCA	99	65.395	ENSGGOG00000009546	-	99	65.395	Gorilla_gorilla
ENSXETG00000031661	RTCA	99	57.766	ENSHBUG00000002114	rtca	99	57.766	Haplochromis_burtoni
ENSXETG00000031661	RTCA	99	63.488	ENSHGLG00000002617	RTCA	99	63.488	Heterocephalus_glaber_female
ENSXETG00000031661	RTCA	99	63.488	ENSHGLG00100006056	RTCA	99	63.488	Heterocephalus_glaber_male
ENSXETG00000031661	RTCA	99	55.342	ENSHCOG00000020628	rtca	89	55.342	Hippocampus_comes
ENSXETG00000031661	RTCA	98	58.953	ENSIPUG00000024803	rtca	98	58.953	Ictalurus_punctatus
ENSXETG00000031661	RTCA	99	55.313	ENSSTOG00000033099	-	99	55.313	Ictidomys_tridecemlineatus
ENSXETG00000031661	RTCA	99	58.856	ENSSTOG00000013528	-	99	58.856	Ictidomys_tridecemlineatus
ENSXETG00000031661	RTCA	99	50.000	ENSJJAG00000016178	Rtca	98	47.397	Jaculus_jaculus
ENSXETG00000031661	RTCA	98	57.300	ENSKMAG00000006651	rtca	98	57.300	Kryptolebias_marmoratus
ENSXETG00000031661	RTCA	90	55.172	ENSLBEG00000002448	-	98	57.321	Labrus_bergylta
ENSXETG00000031661	RTCA	98	58.449	ENSLBEG00000028971	rtca	98	58.449	Labrus_bergylta
ENSXETG00000031661	RTCA	98	61.433	ENSLACG00000013666	RTCA	98	61.433	Latimeria_chalumnae
ENSXETG00000031661	RTCA	98	61.326	ENSLOCG00000000093	rtca	98	61.326	Lepisosteus_oculatus
ENSXETG00000031661	RTCA	99	65.123	ENSLAFG00000001473	RTCA	99	65.123	Loxodonta_africana
ENSXETG00000031661	RTCA	99	65.123	ENSMFAG00000034132	RTCA	99	65.123	Macaca_fascicularis
ENSXETG00000031661	RTCA	99	64.578	ENSMMUG00000019105	RTCA	99	64.578	Macaca_mulatta
ENSXETG00000031661	RTCA	84	63.023	ENSMNEG00000037163	RTCA	99	63.023	Macaca_nemestrina
ENSXETG00000031661	RTCA	99	50.954	ENSMLEG00000042151	RTCA	99	50.954	Mandrillus_leucophaeus
ENSXETG00000031661	RTCA	99	58.038	ENSMAMG00000016536	rtca	99	58.038	Mastacembelus_armatus
ENSXETG00000031661	RTCA	99	58.038	ENSMZEG00005017945	rtca	99	58.038	Maylandia_zebra
ENSXETG00000031661	RTCA	90	60.568	ENSMGAG00000006892	RTCA	99	62.617	Meleagris_gallopavo
ENSXETG00000031661	RTCA	99	66.393	ENSMAUG00000008488	Rtca	99	66.393	Mesocricetus_auratus
ENSXETG00000031661	RTCA	84	63.666	ENSMICG00000008643	RTCA	99	63.666	Microcebus_murinus
ENSXETG00000031661	RTCA	99	66.667	ENSMOCG00000016660	Rtca	99	66.667	Microtus_ochrogaster
ENSXETG00000031661	RTCA	83	56.818	ENSMMOG00000007750	rtca	99	56.818	Mola_mola
ENSXETG00000031661	RTCA	99	66.027	ENSMODG00000003557	RTCA	99	66.027	Monodelphis_domestica
ENSXETG00000031661	RTCA	98	58.172	ENSMALG00000020844	rtca	98	58.172	Monopterus_albus
ENSXETG00000031661	RTCA	99	67.213	MGP_CAROLIEiJ_G0025565	Rtca	95	71.963	Mus_caroli
ENSXETG00000031661	RTCA	99	66.667	ENSMUSG00000000339	Rtca	95	71.963	Mus_musculus
ENSXETG00000031661	RTCA	99	66.940	MGP_PahariEiJ_G0027011	Rtca	95	71.963	Mus_pahari
ENSXETG00000031661	RTCA	99	66.940	MGP_SPRETEiJ_G0026515	Rtca	95	71.963	Mus_spretus
ENSXETG00000031661	RTCA	98	65.385	ENSMPUG00000012119	RTCA	98	65.385	Mustela_putorius_furo
ENSXETG00000031661	RTCA	99	63.143	ENSMLUG00000009922	RTCA	99	62.228	Myotis_lucifugus
ENSXETG00000031661	RTCA	98	65.659	ENSNGAG00000011540	Rtca	98	65.659	Nannospalax_galili
ENSXETG00000031661	RTCA	99	58.038	ENSNBRG00000003062	rtca	99	58.038	Neolamprologus_brichardi
ENSXETG00000031661	RTCA	99	65.123	ENSNLEG00000031426	RTCA	99	65.123	Nomascus_leucogenys
ENSXETG00000031661	RTCA	73	58.519	ENSOPRG00000012092	RTCA	70	58.519	Ochotona_princeps
ENSXETG00000031661	RTCA	99	61.494	ENSODEG00000006990	RTCA	96	63.842	Octodon_degus
ENSXETG00000031661	RTCA	99	58.038	ENSONIG00000007753	rtca	99	58.038	Oreochromis_niloticus
ENSXETG00000031661	RTCA	89	62.342	ENSOANG00000012055	RTCA	98	63.750	Ornithorhynchus_anatinus
ENSXETG00000031661	RTCA	99	65.489	ENSOCUG00000014247	RTCA	99	65.489	Oryctolagus_cuniculus
ENSXETG00000031661	RTCA	98	58.127	ENSORLG00000013605	rtca	98	58.127	Oryzias_latipes
ENSXETG00000031661	RTCA	98	58.402	ENSORLG00020001904	rtca	98	58.402	Oryzias_latipes_hni
ENSXETG00000031661	RTCA	99	58.038	ENSORLG00015021064	rtca	99	58.038	Oryzias_latipes_hsok
ENSXETG00000031661	RTCA	99	57.221	ENSOMEG00000000756	rtca	99	57.221	Oryzias_melastigma
ENSXETG00000031661	RTCA	99	57.493	ENSOGAG00000005627	RTCA	99	57.493	Otolemur_garnettii
ENSXETG00000031661	RTCA	87	64.798	ENSOARG00000018122	RTCA	99	64.798	Ovis_aries
ENSXETG00000031661	RTCA	99	63.421	ENSPPAG00000035119	RTCA	99	63.421	Pan_paniscus
ENSXETG00000031661	RTCA	99	65.479	ENSPPRG00000000350	RTCA	99	65.479	Panthera_pardus
ENSXETG00000031661	RTCA	99	65.479	ENSPTIG00000012816	RTCA	99	65.479	Panthera_tigris_altaica
ENSXETG00000031661	RTCA	99	62.895	ENSPTRG00000001004	RTCA	99	62.895	Pan_troglodytes
ENSXETG00000031661	RTCA	99	65.123	ENSPANG00000000346	RTCA	99	65.123	Papio_anubis
ENSXETG00000031661	RTCA	98	59.945	ENSPKIG00000001653	rtca	98	59.945	Paramormyrops_kingsleyae
ENSXETG00000031661	RTCA	99	62.670	ENSPSIG00000011408	RTCA	99	62.670	Pelodiscus_sinensis
ENSXETG00000031661	RTCA	99	65.847	ENSPEMG00000018582	Rtca	99	65.847	Peromyscus_maniculatus_bairdii
ENSXETG00000031661	RTCA	99	49.728	ENSPMAG00000009110	rtca	99	49.728	Petromyzon_marinus
ENSXETG00000031661	RTCA	50	30.636	ENSPMAG00000005419	-	90	30.636	Petromyzon_marinus
ENSXETG00000031661	RTCA	99	65.123	ENSPCIG00000007684	RTCA	99	65.123	Phascolarctos_cinereus
ENSXETG00000031661	RTCA	99	57.065	ENSPFOG00000004824	rtca	99	57.065	Poecilia_formosa
ENSXETG00000031661	RTCA	99	57.493	ENSPLAG00000011753	rtca	99	57.493	Poecilia_latipinna
ENSXETG00000031661	RTCA	99	57.493	ENSPMEG00000020469	rtca	99	57.493	Poecilia_mexicana
ENSXETG00000031661	RTCA	99	58.038	ENSPREG00000001365	rtca	99	58.038	Poecilia_reticulata
ENSXETG00000031661	RTCA	99	65.123	ENSPPYG00000001115	RTCA	99	65.123	Pongo_abelii
ENSXETG00000031661	RTCA	99	62.568	ENSPCAG00000005076	RTCA	99	62.568	Procavia_capensis
ENSXETG00000031661	RTCA	99	65.123	ENSPCOG00000005603	RTCA	99	65.123	Propithecus_coquereli
ENSXETG00000031661	RTCA	99	61.905	ENSPVAG00000009478	RTCA	99	61.905	Pteropus_vampyrus
ENSXETG00000031661	RTCA	99	58.038	ENSPNYG00000004722	rtca	99	58.038	Pundamilia_nyererei
ENSXETG00000031661	RTCA	99	58.516	ENSPNAG00000022270	rtca	99	58.516	Pygocentrus_nattereri
ENSXETG00000031661	RTCA	99	66.120	ENSRNOG00000014575	Rtca	99	66.120	Rattus_norvegicus
ENSXETG00000031661	RTCA	99	62.368	ENSRBIG00000041180	RTCA	99	62.379	Rhinopithecus_bieti
ENSXETG00000031661	RTCA	99	64.578	ENSRROG00000024929	RTCA	99	64.578	Rhinopithecus_roxellana
ENSXETG00000031661	RTCA	99	65.123	ENSSBOG00000028626	RTCA	99	65.123	Saimiri_boliviensis_boliviensis
ENSXETG00000031661	RTCA	99	65.753	ENSSHAG00000001758	RTCA	99	65.753	Sarcophilus_harrisii
ENSXETG00000031661	RTCA	98	56.906	ENSSMAG00000014680	rtca	96	56.906	Scophthalmus_maximus
ENSXETG00000031661	RTCA	98	58.287	ENSSDUG00000015585	rtca	96	58.287	Seriola_dumerili
ENSXETG00000031661	RTCA	99	57.020	ENSSLDG00000018985	rtca	95	58.640	Seriola_lalandi_dorsalis
ENSXETG00000031661	RTCA	89	59.177	ENSSARG00000013993	RTCA	99	61.875	Sorex_araneus
ENSXETG00000031661	RTCA	99	57.221	ENSSPAG00000011938	rtca	99	57.221	Stegastes_partitus
ENSXETG00000031661	RTCA	99	67.030	ENSSSCG00000006865	RTCA	99	67.030	Sus_scrofa
ENSXETG00000031661	RTCA	99	63.488	ENSTGUG00000005154	RTCA	99	63.488	Taeniopygia_guttata
ENSXETG00000031661	RTCA	99	57.766	ENSTRUG00000008799	rtca	99	57.766	Takifugu_rubripes
ENSXETG00000031661	RTCA	99	58.356	ENSTNIG00000004725	rtca	99	58.356	Tetraodon_nigroviridis
ENSXETG00000031661	RTCA	62	66.316	ENSTBEG00000000943	RTCA	59	65.741	Tupaia_belangeri
ENSXETG00000031661	RTCA	99	63.158	ENSTTRG00000015327	RTCA	99	63.158	Tursiops_truncatus
ENSXETG00000031661	RTCA	93	64.912	ENSUAMG00000017265	RTCA	95	64.912	Ursus_americanus
ENSXETG00000031661	RTCA	99	65.753	ENSUMAG00000007881	RTCA	99	65.753	Ursus_maritimus
ENSXETG00000031661	RTCA	89	54.747	ENSVPAG00000001039	RTCA	83	57.500	Vicugna_pacos
ENSXETG00000031661	RTCA	99	65.479	ENSVVUG00000022041	RTCA	67	65.479	Vulpes_vulpes
ENSXETG00000031661	RTCA	99	48.501	ENSXCOG00000008002	rtca	99	48.501	Xiphophorus_couchianus
ENSXETG00000031661	RTCA	99	57.766	ENSXMAG00000005482	rtca	99	57.766	Xiphophorus_maculatus