EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000032215 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: -
Full Name: Xenopus tropicalis SHQ1%2C H/ACA ribonucleoprotein assembly factor (shq1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 59272 bases
Position: chrGL173040.1:917998-977269
Accession: NM_001079148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000001920	SHQ1	PF04925.15	1.5e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000001920	-	2371	XM_012961357	ENSXETP00000001920	604 (aa)	XP_012816811	F7B158

Gene Model

Click here to download ENSXETG00000032215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000032215's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000032215	shq1	93	54.545	ENSG00000144736	SHQ1	96	79.167	Homo_sapiens
ENSXETG00000032215	shq1	71	61.201	ENSAPOG00000000397	shq1	70	61.432	Acanthochromis_polyacanthus
ENSXETG00000032215	shq1	90	57.117	ENSAMEG00000015140	SHQ1	76	65.826	Ailuropoda_melanoleuca
ENSXETG00000032215	shq1	99	49.100	ENSACIG00000021249	shq1	71	60.417	Amphilophus_citrinellus
ENSXETG00000032215	shq1	71	62.356	ENSAOCG00000023311	shq1	70	62.587	Amphiprion_ocellaris
ENSXETG00000032215	shq1	71	61.663	ENSAPEG00000021686	shq1	70	61.894	Amphiprion_percula
ENSXETG00000032215	shq1	99	49.106	ENSATEG00000008475	shq1	73	60.360	Anabas_testudineus
ENSXETG00000032215	shq1	80	60.041	ENSAPLG00000013926	SHQ1	90	62.092	Anas_platyrhynchos
ENSXETG00000032215	shq1	99	52.280	ENSACAG00000014809	SHQ1	91	52.280	Anolis_carolinensis
ENSXETG00000032215	shq1	79	62.705	ENSANAG00000029241	SHQ1	77	65.315	Aotus_nancymaae
ENSXETG00000032215	shq1	81	46.450	ENSANAG00000030500	-	72	49.289	Aotus_nancymaae
ENSXETG00000032215	shq1	99	48.706	ENSACLG00000023077	shq1	99	45.975	Astatotilapia_calliptera
ENSXETG00000032215	shq1	70	55.269	ENSAMXG00000043822	shq1	75	55.196	Astyanax_mexicanus
ENSXETG00000032215	shq1	93	55.052	ENSBTAG00000005436	SHQ1	75	65.747	Bos_taurus
ENSXETG00000032215	shq1	70	34.325	WBGene00021655	Y48A5A.1	97	34.169	Caenorhabditis_elegans
ENSXETG00000032215	shq1	92	55.363	ENSCJAG00000015131	SHQ1	77	65.315	Callithrix_jacchus
ENSXETG00000032215	shq1	90	55.856	ENSCAFG00000006434	SHQ1	77	65.688	Canis_familiaris
ENSXETG00000032215	shq1	90	55.856	ENSCAFG00020016743	SHQ1	77	65.688	Canis_lupus_dingo
ENSXETG00000032215	shq1	71	65.446	ENSCHIG00000012271	SHQ1	68	65.446	Capra_hircus
ENSXETG00000032215	shq1	72	62.443	ENSTSYG00000014439	SHQ1	77	62.443	Carlito_syrichta
ENSXETG00000032215	shq1	74	53.422	ENSCAPG00000009343	SHQ1	65	68.539	Cavia_aperea
ENSXETG00000032215	shq1	72	65.688	ENSCPOG00000011443	SHQ1	76	65.837	Cavia_porcellus
ENSXETG00000032215	shq1	72	57.596	ENSCCAG00000027080	SHQ1	75	56.916	Cebus_capucinus
ENSXETG00000032215	shq1	81	48.577	ENSCCAG00000036087	-	73	51.408	Cebus_capucinus
ENSXETG00000032215	shq1	78	61.992	ENSCATG00000041238	SHQ1	76	66.140	Cercocebus_atys
ENSXETG00000032215	shq1	72	66.667	ENSCLAG00000004206	SHQ1	77	66.817	Chinchilla_lanigera
ENSXETG00000032215	shq1	78	52.209	ENSCSAG00000011514	SHQ1	72	64.689	Chlorocebus_sabaeus
ENSXETG00000032215	shq1	99	54.180	ENSCPBG00000006441	SHQ1	72	65.688	Chrysemys_picta_bellii
ENSXETG00000032215	shq1	67	44.660	ENSCING00000008013	-	96	44.647	Ciona_intestinalis
ENSXETG00000032215	shq1	64	42.347	ENSCSAVG00000002332	-	98	42.396	Ciona_savignyi
ENSXETG00000032215	shq1	78	63.008	ENSCANG00000039295	SHQ1	77	66.591	Colobus_angolensis_palliatus
ENSXETG00000032215	shq1	71	65.675	ENSCGRG00001012583	Shq1	77	65.675	Cricetulus_griseus_chok1gshd
ENSXETG00000032215	shq1	71	65.675	ENSCGRG00000009849	Shq1	77	65.675	Cricetulus_griseus_crigri
ENSXETG00000032215	shq1	68	61.501	ENSCSEG00000007829	shq1	69	62.093	Cynoglossus_semilaevis
ENSXETG00000032215	shq1	71	62.069	ENSCVAG00000020049	shq1	99	51.236	Cyprinodon_variegatus
ENSXETG00000032215	shq1	71	58.333	ENSDARG00000058522	shq1	74	57.273	Danio_rerio
ENSXETG00000032215	shq1	79	61.554	ENSDNOG00000033937	SHQ1	77	64.719	Dasypus_novemcinctus
ENSXETG00000032215	shq1	71	57.471	ENSETEG00000005766	SHQ1	76	57.471	Echinops_telfairi
ENSXETG00000032215	shq1	61	47.027	ENSEBUG00000005445	shq1	80	48.286	Eptatretus_burgeri
ENSXETG00000032215	shq1	79	63.265	ENSEASG00005002237	SHQ1	77	66.892	Equus_asinus_asinus
ENSXETG00000032215	shq1	79	63.265	ENSECAG00000015673	SHQ1	75	66.892	Equus_caballus
ENSXETG00000032215	shq1	72	64.494	ENSEEUG00000010568	SHQ1	77	64.640	Erinaceus_europaeus
ENSXETG00000032215	shq1	67	60.732	ENSELUG00000003476	shq1	81	58.684	Esox_lucius
ENSXETG00000032215	shq1	90	57.220	ENSFCAG00000012781	SHQ1	76	65.446	Felis_catus
ENSXETG00000032215	shq1	99	53.883	ENSFALG00000013428	SHQ1	100	52.751	Ficedula_albicollis
ENSXETG00000032215	shq1	72	64.027	ENSFDAG00000005595	SHQ1	68	64.027	Fukomys_damarensis
ENSXETG00000032215	shq1	71	61.468	ENSFHEG00000017552	shq1	74	61.327	Fundulus_heteroclitus
ENSXETG00000032215	shq1	64	58.163	ENSGMOG00000007350	shq1	100	58.779	Gadus_morhua
ENSXETG00000032215	shq1	99	53.268	ENSGALG00000007798	SHQ1	100	52.295	Gallus_gallus
ENSXETG00000032215	shq1	64	59.184	ENSGACG00000011797	shq1	100	59.439	Gasterosteus_aculeatus
ENSXETG00000032215	shq1	93	54.608	ENSGGOG00000034818	SHQ1	76	65.237	Gorilla_gorilla
ENSXETG00000032215	shq1	99	49.271	ENSHBUG00000010857	shq1	99	49.191	Haplochromis_burtoni
ENSXETG00000032215	shq1	72	64.480	ENSHGLG00000003637	SHQ1	69	64.706	Heterocephalus_glaber_female
ENSXETG00000032215	shq1	72	64.480	ENSHGLG00100011957	SHQ1	69	64.706	Heterocephalus_glaber_male
ENSXETG00000032215	shq1	98	46.812	ENSHCOG00000010799	shq1	98	46.787	Hippocampus_comes
ENSXETG00000032215	shq1	72	56.492	ENSIPUG00000001247	shq1	75	56.492	Ictalurus_punctatus
ENSXETG00000032215	shq1	72	63.927	ENSSTOG00000010043	SHQ1	81	63.864	Ictidomys_tridecemlineatus
ENSXETG00000032215	shq1	72	64.932	ENSJJAG00000017611	Shq1	78	64.932	Jaculus_jaculus
ENSXETG00000032215	shq1	71	59.353	ENSKMAG00000004457	shq1	99	49.752	Kryptolebias_marmoratus
ENSXETG00000032215	shq1	72	65.914	ENSLACG00000014243	SHQ1	67	66.213	Latimeria_chalumnae
ENSXETG00000032215	shq1	99	50.955	ENSLOCG00000009970	shq1	76	60.731	Lepisosteus_oculatus
ENSXETG00000032215	shq1	78	62.195	ENSMFAG00000039148	SHQ1	77	66.216	Macaca_fascicularis
ENSXETG00000032215	shq1	78	45.082	ENSMFAG00000037396	-	75	47.608	Macaca_fascicularis
ENSXETG00000032215	shq1	70	60.135	ENSMMUG00000009571	SHQ1	72	64.557	Macaca_mulatta
ENSXETG00000032215	shq1	78	45.082	ENSMMUG00000021761	-	75	47.608	Macaca_mulatta
ENSXETG00000032215	shq1	78	62.195	ENSMNEG00000032667	SHQ1	77	66.216	Macaca_nemestrina
ENSXETG00000032215	shq1	93	55.593	ENSMLEG00000038493	SHQ1	76	65.914	Mandrillus_leucophaeus
ENSXETG00000032215	shq1	99	49.445	ENSMAMG00000023432	shq1	67	61.098	Mastacembelus_armatus
ENSXETG00000032215	shq1	99	49.109	ENSMZEG00005008649	shq1	99	49.029	Maylandia_zebra
ENSXETG00000032215	shq1	99	53.770	ENSMGAG00000009640	SHQ1	100	52.475	Meleagris_gallopavo
ENSXETG00000032215	shq1	73	64.143	ENSMAUG00000022030	Shq1	79	64.143	Mesocricetus_auratus
ENSXETG00000032215	shq1	77	61.311	ENSMICG00000009224	SHQ1	75	64.531	Microcebus_murinus
ENSXETG00000032215	shq1	72	65.169	ENSMOCG00000017836	Shq1	79	65.169	Microtus_ochrogaster
ENSXETG00000032215	shq1	73	59.453	ENSMMOG00000010569	shq1	74	59.453	Mola_mola
ENSXETG00000032215	shq1	83	56.190	ENSMODG00000003926	SHQ1	78	62.014	Monodelphis_domestica
ENSXETG00000032215	shq1	99	50.573	ENSMALG00000008870	shq1	99	50.163	Monopterus_albus
ENSXETG00000032215	shq1	72	64.414	MGP_CAROLIEiJ_G0028689	Shq1	78	64.853	Mus_caroli
ENSXETG00000032215	shq1	77	62.264	ENSMUSG00000035378	Shq1	78	65.158	Mus_musculus
ENSXETG00000032215	shq1	71	65.682	MGP_PahariEiJ_G0022440	Shq1	78	65.315	Mus_pahari
ENSXETG00000032215	shq1	77	63.257	MGP_SPRETEiJ_G0029717	Shq1	78	64.494	Mus_spretus
ENSXETG00000032215	shq1	90	56.912	ENSMPUG00000017006	SHQ1	94	56.216	Mustela_putorius_furo
ENSXETG00000032215	shq1	83	52.216	ENSMLUG00000013539	SHQ1	97	52.047	Myotis_lucifugus
ENSXETG00000032215	shq1	77	56.448	ENSNGAG00000023317	Shq1	76	58.333	Nannospalax_galili
ENSXETG00000032215	shq1	56	57.514	ENSNBRG00000024004	shq1	99	46.503	Neolamprologus_brichardi
ENSXETG00000032215	shq1	93	56.174	ENSNLEG00000002731	SHQ1	76	66.140	Nomascus_leucogenys
ENSXETG00000032215	shq1	68	56.481	ENSMEUG00000009350	-	72	56.481	Notamacropus_eugenii
ENSXETG00000032215	shq1	72	63.883	ENSODEG00000009192	SHQ1	82	64.108	Octodon_degus
ENSXETG00000032215	shq1	99	48.544	ENSONIG00000020264	shq1	99	47.974	Oreochromis_niloticus
ENSXETG00000032215	shq1	80	60.161	ENSOCUG00000016695	SHQ1	77	62.832	Oryctolagus_cuniculus
ENSXETG00000032215	shq1	67	58.637	ENSORLG00000023538	shq1	80	57.823	Oryzias_latipes
ENSXETG00000032215	shq1	67	59.367	ENSORLG00020003697	shq1	79	58.503	Oryzias_latipes_hni
ENSXETG00000032215	shq1	67	58.151	ENSORLG00015021040	shq1	78	58.065	Oryzias_latipes_hsok
ENSXETG00000032215	shq1	70	59.346	ENSOMEG00000001225	shq1	79	58.503	Oryzias_melastigma
ENSXETG00000032215	shq1	91	56.140	ENSOGAG00000003898	SHQ1	78	64.653	Otolemur_garnettii
ENSXETG00000032215	shq1	71	64.480	ENSOARG00000009547	SHQ1	76	64.480	Ovis_aries
ENSXETG00000032215	shq1	78	48.745	ENSPPAG00000043263	-	75	50.114	Pan_paniscus
ENSXETG00000032215	shq1	93	54.545	ENSPPAG00000027714	SHQ1	76	66.140	Pan_paniscus
ENSXETG00000032215	shq1	90	56.406	ENSPPRG00000004769	SHQ1	76	65.446	Panthera_pardus
ENSXETG00000032215	shq1	90	54.137	ENSPTIG00000011478	SHQ1	75	62.645	Panthera_tigris_altaica
ENSXETG00000032215	shq1	93	54.545	ENSPTRG00000015106	SHQ1	76	66.140	Pan_troglodytes
ENSXETG00000032215	shq1	78	48.745	ENSPTRG00000048303	-	74	50.114	Pan_troglodytes
ENSXETG00000032215	shq1	93	55.272	ENSPANG00000002881	SHQ1	76	65.760	Papio_anubis
ENSXETG00000032215	shq1	70	59.479	ENSPKIG00000021517	shq1	76	58.102	Paramormyrops_kingsleyae
ENSXETG00000032215	shq1	99	55.628	ENSPSIG00000005536	SHQ1	100	55.628	Pelodiscus_sinensis
ENSXETG00000032215	shq1	98	48.241	ENSPMGG00000008838	shq1	73	59.259	Periophthalmus_magnuspinnatus
ENSXETG00000032215	shq1	72	64.853	ENSPEMG00000000251	Shq1	77	64.853	Peromyscus_maniculatus_bairdii
ENSXETG00000032215	shq1	71	54.955	ENSPMAG00000005372	shq1	98	55.405	Petromyzon_marinus
ENSXETG00000032215	shq1	71	60.046	ENSPFOG00000003118	shq1	81	59.910	Poecilia_formosa
ENSXETG00000032215	shq1	56	57.637	ENSPMEG00000011076	shq1	77	58.074	Poecilia_mexicana
ENSXETG00000032215	shq1	62	57.812	ENSPREG00000000591	shq1	75	57.431	Poecilia_reticulata
ENSXETG00000032215	shq1	93	54.983	ENSPPYG00000013717	SHQ1	76	65.688	Pongo_abelii
ENSXETG00000032215	shq1	72	63.063	ENSPCAG00000009035	SHQ1	78	63.063	Procavia_capensis
ENSXETG00000032215	shq1	72	63.982	ENSPCOG00000008415	SHQ1	76	65.022	Propithecus_coquereli
ENSXETG00000032215	shq1	79	61.507	ENSPVAG00000017392	SHQ1	77	65.011	Pteropus_vampyrus
ENSXETG00000032215	shq1	99	48.377	ENSPNYG00000003878	shq1	99	48.136	Pundamilia_nyererei
ENSXETG00000032215	shq1	70	57.576	ENSPNAG00000026840	shq1	72	57.336	Pygocentrus_nattereri
ENSXETG00000032215	shq1	72	64.944	ENSRNOG00000005433	Shq1	73	65.385	Rattus_norvegicus
ENSXETG00000032215	shq1	78	60.861	ENSRBIG00000026280	SHQ1	76	64.237	Rhinopithecus_bieti
ENSXETG00000032215	shq1	78	62.805	ENSRROG00000034126	SHQ1	77	66.366	Rhinopithecus_roxellana
ENSXETG00000032215	shq1	72	58.957	ENSSBOG00000021038	SHQ1	75	58.503	Saimiri_boliviensis_boliviensis
ENSXETG00000032215	shq1	82	56.719	ENSSHAG00000015077	SHQ1	79	62.697	Sarcophilus_harrisii
ENSXETG00000032215	shq1	72	60.998	ENSSFOG00015016241	shq1	100	50.083	Scleropages_formosus
ENSXETG00000032215	shq1	71	60.046	ENSSMAG00000016151	shq1	72	59.453	Scophthalmus_maximus
ENSXETG00000032215	shq1	99	49.280	ENSSDUG00000011986	shq1	99	49.440	Seriola_dumerili
ENSXETG00000032215	shq1	99	50.900	ENSSLDG00000013908	shq1	99	49.349	Seriola_lalandi_dorsalis
ENSXETG00000032215	shq1	91	48.022	ENSSARG00000007119	SHQ1	78	54.110	Sorex_araneus
ENSXETG00000032215	shq1	84	48.302	ENSSPUG00000011526	-	97	49.811	Sphenodon_punctatus
ENSXETG00000032215	shq1	93	55.286	ENSSSCG00000011518	SHQ1	75	65.367	Sus_scrofa
ENSXETG00000032215	shq1	78	61.020	ENSTGUG00000009933	SHQ1	76	64.465	Taeniopygia_guttata
ENSXETG00000032215	shq1	99	46.743	ENSTRUG00000009446	shq1	98	47.157	Takifugu_rubripes
ENSXETG00000032215	shq1	67	55.474	ENSTNIG00000007354	shq1	96	55.760	Tetraodon_nigroviridis
ENSXETG00000032215	shq1	62	76.596	ENSTBEG00000011295	SHQ1	55	76.596	Tupaia_belangeri
ENSXETG00000032215	shq1	90	54.937	ENSTTRG00000005320	SHQ1	77	63.677	Tursiops_truncatus
ENSXETG00000032215	shq1	90	56.806	ENSUMAG00000024031	SHQ1	76	65.068	Ursus_maritimus
ENSXETG00000032215	shq1	70	52.727	ENSVPAG00000004880	SHQ1	75	54.156	Vicugna_pacos
ENSXETG00000032215	shq1	90	55.576	ENSVVUG00000013906	SHQ1	77	65.463	Vulpes_vulpes