EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000032297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 898 bases
Position: chrGL173740.1:87-984
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000063095	zf-CCHC	PF00098.23	5.1e-10	1	2
ENSXETP00000063095	zf-CCHC	PF00098.23	5.1e-10	2	2
ENSXETP00000058838	zf-CCHC	PF00098.23	9.6e-10	1	2
ENSXETP00000058838	zf-CCHC	PF00098.23	9.6e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000063923	-	498	-	ENSXETP00000063095	166 (aa)	-	F7EV64
ENSXETT00000061844	-	570	-	ENSXETP00000058838	190 (aa)	-	F6XGX7

Gene Model

Click here to download ENSXETG00000032297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000032297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000032297	-	80	30.714	ENSXETG00000030161	-	88	30.935
ENSXETG00000032297	-	86	58.042	ENSXETG00000033143	-	87	58.784
ENSXETG00000032297	-	96	49.727	ENSXETG00000030911	-	97	49.727
ENSXETG00000032297	-	96	49.727	ENSXETG00000033566	-	97	49.727
ENSXETG00000032297	-	100	100.000	ENSXETG00000031282	-	100	100.000
ENSXETG00000032297	-	96	49.727	ENSXETG00000034120	-	97	49.727
ENSXETG00000032297	-	80	38.235	ENSXETG00000030090	-	84	35.152
ENSXETG00000032297	-	96	49.727	ENSXETG00000033553	-	97	49.727
ENSXETG00000032297	-	100	100.000	ENSXETG00000032402	-	100	100.000
ENSXETG00000032297	-	96	49.180	ENSXETG00000034004	-	97	49.180
ENSXETG00000032297	-	96	49.727	ENSXETG00000033661	-	97	49.727
ENSXETG00000032297	-	93	57.627	ENSXETG00000031539	-	94	57.627
ENSXETG00000032297	-	92	55.747	ENSXETG00000005590	-	58	55.747
ENSXETG00000032297	-	99	47.414	ENSXETG00000032242	-	100	47.414
ENSXETG00000032297	-	96	58.678	ENSXETG00000033341	-	99	58.678
ENSXETG00000032297	-	80	48.120	ENSXETG00000033641	-	87	49.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000032297	-	97	41.176	ENSAMEG00000013999	ZCCHC3	60	41.176	Ailuropoda_melanoleuca
ENSXETG00000032297	-	86	38.194	ENSATEG00000004599	-	69	38.710	Anabas_testudineus
ENSXETG00000032297	-	89	30.464	ENSACLG00000011316	-	72	30.464	Astatotilapia_calliptera
ENSXETG00000032297	-	89	30.464	ENSACLG00000014014	-	71	30.464	Astatotilapia_calliptera
ENSXETG00000032297	-	89	30.464	ENSACLG00000015881	-	73	30.464	Astatotilapia_calliptera
ENSXETG00000032297	-	75	33.594	ENSACLG00000019919	-	90	32.394	Astatotilapia_calliptera
ENSXETG00000032297	-	89	32.450	ENSAMXG00000035711	-	79	32.500	Astyanax_mexicanus
ENSXETG00000032297	-	95	33.702	ENSAMXG00000035044	-	50	33.702	Astyanax_mexicanus
ENSXETG00000032297	-	95	33.333	ENSAMXG00000033087	-	55	32.240	Astyanax_mexicanus
ENSXETG00000032297	-	97	41.176	ENSCAFG00000025206	ZCCHC3	67	41.176	Canis_familiaris
ENSXETG00000032297	-	97	41.176	ENSCANG00000010812	ZCCHC3	68	41.176	Colobus_angolensis_palliatus
ENSXETG00000032297	-	97	41.176	ENSCGRG00001011895	-	52	41.176	Cricetulus_griseus_chok1gshd
ENSXETG00000032297	-	97	41.176	ENSCGRG00000008273	-	52	41.176	Cricetulus_griseus_crigri
ENSXETG00000032297	-	87	37.415	ENSELUG00000002602	-	82	35.897	Esox_lucius
ENSXETG00000032297	-	92	37.079	ENSELUG00000017799	-	57	37.079	Esox_lucius
ENSXETG00000032297	-	97	41.176	ENSGGOG00000044213	ZCCHC3	57	41.176	Gorilla_gorilla
ENSXETG00000032297	-	92	31.818	ENSHBUG00000005879	-	64	31.818	Haplochromis_burtoni
ENSXETG00000032297	-	87	37.415	ENSHBUG00000011697	-	70	36.774	Haplochromis_burtoni
ENSXETG00000032297	-	97	37.968	ENSHGLG00100009699	ZCCHC3	53	37.968	Heterocephalus_glaber_male
ENSXETG00000032297	-	64	31.818	ENSIPUG00000013198	-	51	31.818	Ictalurus_punctatus
ENSXETG00000032297	-	93	43.258	ENSLACG00000012103	-	53	43.258	Latimeria_chalumnae
ENSXETG00000032297	-	93	40.385	ENSLACG00000002864	-	60	39.888	Latimeria_chalumnae
ENSXETG00000032297	-	93	39.326	ENSLACG00000000032	-	51	39.326	Latimeria_chalumnae
ENSXETG00000032297	-	88	40.828	ENSLACG00000012216	-	55	40.828	Latimeria_chalumnae
ENSXETG00000032297	-	96	41.848	ENSLACG00000002300	-	56	41.848	Latimeria_chalumnae
ENSXETG00000032297	-	89	47.973	ENSLACG00000003328	-	63	44.571	Latimeria_chalumnae
ENSXETG00000032297	-	87	35.043	ENSLOCG00000000297	-	88	35.043	Lepisosteus_oculatus
ENSXETG00000032297	-	87	33.793	ENSLOCG00000000632	-	85	34.028	Lepisosteus_oculatus
ENSXETG00000032297	-	75	36.719	ENSLOCG00000017641	-	90	36.719	Lepisosteus_oculatus
ENSXETG00000032297	-	84	34.028	ENSLOCG00000012680	-	90	34.028	Lepisosteus_oculatus
ENSXETG00000032297	-	87	33.557	ENSLOCG00000017639	-	92	32.335	Lepisosteus_oculatus
ENSXETG00000032297	-	87	33.784	ENSLOCG00000017328	-	87	33.784	Lepisosteus_oculatus
ENSXETG00000032297	-	84	31.469	ENSLOCG00000018075	-	73	31.469	Lepisosteus_oculatus
ENSXETG00000032297	-	86	31.973	ENSLOCG00000010606	-	99	31.973	Lepisosteus_oculatus
ENSXETG00000032297	-	79	35.433	ENSLOCG00000000602	-	97	35.433	Lepisosteus_oculatus
ENSXETG00000032297	-	93	34.177	ENSLOCG00000017867	-	92	33.750	Lepisosteus_oculatus
ENSXETG00000032297	-	80	36.765	ENSLOCG00000017327	-	93	36.765	Lepisosteus_oculatus
ENSXETG00000032297	-	89	32.768	ENSLOCG00000017303	-	94	32.768	Lepisosteus_oculatus
ENSXETG00000032297	-	85	35.862	ENSLOCG00000017302	-	84	35.862	Lepisosteus_oculatus
ENSXETG00000032297	-	80	36.029	ENSLOCG00000017305	-	93	36.029	Lepisosteus_oculatus
ENSXETG00000032297	-	87	30.709	ENSLOCG00000000320	-	86	30.709	Lepisosteus_oculatus
ENSXETG00000032297	-	93	36.478	ENSLOCG00000017974	-	90	33.708	Lepisosteus_oculatus
ENSXETG00000032297	-	81	35.652	ENSLOCG00000008338	-	85	35.652	Lepisosteus_oculatus
ENSXETG00000032297	-	84	35.664	ENSLOCG00000017530	-	87	34.899	Lepisosteus_oculatus
ENSXETG00000032297	-	86	33.333	ENSLOCG00000017670	-	91	32.121	Lepisosteus_oculatus
ENSXETG00000032297	-	76	36.923	ENSLOCG00000017824	-	93	36.923	Lepisosteus_oculatus
ENSXETG00000032297	-	89	33.775	ENSLOCG00000017503	-	89	32.919	Lepisosteus_oculatus
ENSXETG00000032297	-	93	31.447	ENSLOCG00000006695	-	92	31.875	Lepisosteus_oculatus
ENSXETG00000032297	-	81	34.783	ENSLOCG00000000361	-	93	34.783	Lepisosteus_oculatus
ENSXETG00000032297	-	87	34.228	ENSLOCG00000018355	-	87	34.459	Lepisosteus_oculatus
ENSXETG00000032297	-	94	31.875	ENSLOCG00000017623	-	69	30.814	Lepisosteus_oculatus
ENSXETG00000032297	-	97	41.176	ENSLAFG00000030593	ZCCHC3	69	41.176	Loxodonta_africana
ENSXETG00000032297	-	75	33.858	ENSMZEG00005028547	-	94	33.858	Maylandia_zebra
ENSXETG00000032297	-	89	30.464	ENSMZEG00005028130	-	71	30.464	Maylandia_zebra
ENSXETG00000032297	-	89	30.464	ENSMZEG00005028553	-	73	30.464	Maylandia_zebra
ENSXETG00000032297	-	96	32.796	ENSMMOG00000004516	-	56	32.796	Mola_mola
ENSXETG00000032297	-	96	31.183	ENSNBRG00000022137	-	92	31.183	Neolamprologus_brichardi
ENSXETG00000032297	-	97	41.176	ENSOARG00000019161	ZCCHC3	65	41.176	Ovis_aries
ENSXETG00000032297	-	97	41.176	ENSPPAG00000010453	-	71	41.176	Pan_paniscus
ENSXETG00000032297	-	97	38.503	ENSPTIG00000009393	ZCCHC3	74	38.503	Panthera_tigris_altaica
ENSXETG00000032297	-	65	33.945	ENSPKIG00000015924	-	66	33.636	Paramormyrops_kingsleyae
ENSXETG00000032297	-	83	36.170	ENSPNYG00000002656	-	87	35.714	Pundamilia_nyererei
ENSXETG00000032297	-	77	33.333	ENSPNYG00000015964	-	72	33.088	Pundamilia_nyererei
ENSXETG00000032297	-	77	35.115	ENSPNAG00000010555	-	75	34.559	Pygocentrus_nattereri
ENSXETG00000032297	-	54	35.849	ENSPNAG00000002955	-	72	35.849	Pygocentrus_nattereri
ENSXETG00000032297	-	58	35.354	ENSSFOG00015016511	-	59	35.354	Scleropages_formosus
ENSXETG00000032297	-	80	31.387	ENSSFOG00015015819	-	59	32.479	Scleropages_formosus
ENSXETG00000032297	-	78	33.582	ENSSFOG00015012405	-	72	33.582	Scleropages_formosus
ENSXETG00000032297	-	97	41.176	ENSVPAG00000011267	-	76	41.176	Vicugna_pacos