EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000032402 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 1670 bases
Position: chrGL172657.1:2874820-2876489
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000062667	zf-CCHC	PF00098.23	5.1e-10	1	2
ENSXETP00000062667	zf-CCHC	PF00098.23	5.1e-10	2	2
ENSXETP00000059671	zf-CCHC	PF00098.23	9.5e-10	1	2
ENSXETP00000059671	zf-CCHC	PF00098.23	9.5e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000065854	-	570	-	ENSXETP00000059671	190 (aa)	-	F6QTH5
ENSXETT00000066468	-	498	-	ENSXETP00000062667	166 (aa)	-	F7EV64

Gene Model

Click here to download ENSXETG00000032402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000032402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000032402	-	89	55.405	ENSXETG00000034004	-	94	50.847
ENSXETG00000032402	-	86	58.042	ENSXETG00000033143	-	81	58.784
ENSXETG00000032402	-	99	47.414	ENSXETG00000032242	-	100	47.414
ENSXETG00000032402	-	89	33.898	ENSXETG00000030090	-	90	33.898
ENSXETG00000032402	-	80	30.714	ENSXETG00000030161	-	87	30.935
ENSXETG00000032402	-	93	57.627	ENSXETG00000031539	-	94	57.627
ENSXETG00000032402	-	89	56.081	ENSXETG00000033553	-	94	51.412
ENSXETG00000032402	-	80	48.120	ENSXETG00000033641	-	87	49.275
ENSXETG00000032402	-	89	56.081	ENSXETG00000034120	-	94	51.412
ENSXETG00000032402	-	89	56.081	ENSXETG00000033566	-	94	51.412
ENSXETG00000032402	-	96	58.678	ENSXETG00000033341	-	99	58.678
ENSXETG00000032402	-	89	56.081	ENSXETG00000033661	-	94	51.412
ENSXETG00000032402	-	100	100.000	ENSXETG00000032297	-	100	100.000
ENSXETG00000032402	-	89	55.405	ENSXETG00000030911	-	94	50.847
ENSXETG00000032402	-	100	100.000	ENSXETG00000031282	-	100	100.000
ENSXETG00000032402	-	92	55.747	ENSXETG00000005590	-	58	55.747

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000032402	-	99	40.314	ENSAMEG00000013999	ZCCHC3	61	40.314	Ailuropoda_melanoleuca
ENSXETG00000032402	-	86	38.194	ENSATEG00000004599	-	66	38.514	Anabas_testudineus
ENSXETG00000032402	-	89	30.464	ENSACLG00000015881	-	73	30.464	Astatotilapia_calliptera
ENSXETG00000032402	-	89	30.464	ENSACLG00000014014	-	71	30.464	Astatotilapia_calliptera
ENSXETG00000032402	-	75	33.594	ENSACLG00000019919	-	82	33.594	Astatotilapia_calliptera
ENSXETG00000032402	-	89	30.464	ENSACLG00000011316	-	72	30.464	Astatotilapia_calliptera
ENSXETG00000032402	-	95	30.625	ENSAMXG00000037658	-	53	30.000	Astyanax_mexicanus
ENSXETG00000032402	-	89	32.450	ENSAMXG00000035711	-	77	32.258	Astyanax_mexicanus
ENSXETG00000032402	-	94	33.889	ENSAMXG00000035044	-	50	33.889	Astyanax_mexicanus
ENSXETG00000032402	-	95	33.333	ENSAMXG00000033087	-	51	33.735	Astyanax_mexicanus
ENSXETG00000032402	-	99	40.314	ENSCAFG00000025206	ZCCHC3	68	40.314	Canis_familiaris
ENSXETG00000032402	-	99	40.314	ENSCANG00000010812	ZCCHC3	69	40.314	Colobus_angolensis_palliatus
ENSXETG00000032402	-	99	40.314	ENSCGRG00001011895	-	52	40.314	Cricetulus_griseus_chok1gshd
ENSXETG00000032402	-	99	40.314	ENSCGRG00000008273	-	52	40.314	Cricetulus_griseus_crigri
ENSXETG00000032402	-	87	37.415	ENSELUG00000002602	-	79	36.667	Esox_lucius
ENSXETG00000032402	-	92	37.079	ENSELUG00000017799	-	57	37.079	Esox_lucius
ENSXETG00000032402	-	99	40.314	ENSGGOG00000044213	ZCCHC3	58	40.314	Gorilla_gorilla
ENSXETG00000032402	-	97	32.796	ENSHBUG00000005879	-	66	32.796	Haplochromis_burtoni
ENSXETG00000032402	-	87	37.415	ENSHBUG00000011697	-	68	37.086	Haplochromis_burtoni
ENSXETG00000032402	-	99	38.220	ENSHGLG00100009699	ZCCHC3	54	38.220	Heterocephalus_glaber_male
ENSXETG00000032402	-	64	31.818	ENSIPUG00000013198	-	51	31.818	Ictalurus_punctatus
ENSXETG00000032402	-	89	47.973	ENSLACG00000003328	-	63	44.571	Latimeria_chalumnae
ENSXETG00000032402	-	93	42.697	ENSLACG00000002300	-	54	42.697	Latimeria_chalumnae
ENSXETG00000032402	-	88	40.828	ENSLACG00000012216	-	55	40.828	Latimeria_chalumnae
ENSXETG00000032402	-	100	41.885	ENSLACG00000012103	-	57	41.885	Latimeria_chalumnae
ENSXETG00000032402	-	98	39.037	ENSLACG00000000032	-	53	39.037	Latimeria_chalumnae
ENSXETG00000032402	-	93	40.385	ENSLACG00000002864	-	60	39.888	Latimeria_chalumnae
ENSXETG00000032402	-	94	31.875	ENSLOCG00000017623	-	69	30.814	Lepisosteus_oculatus
ENSXETG00000032402	-	89	33.775	ENSLOCG00000017503	-	84	33.775	Lepisosteus_oculatus
ENSXETG00000032402	-	79	35.433	ENSLOCG00000000602	-	97	35.433	Lepisosteus_oculatus
ENSXETG00000032402	-	81	34.783	ENSLOCG00000000361	-	91	34.783	Lepisosteus_oculatus
ENSXETG00000032402	-	80	36.765	ENSLOCG00000017327	-	93	36.765	Lepisosteus_oculatus
ENSXETG00000032402	-	87	33.784	ENSLOCG00000017328	-	87	33.784	Lepisosteus_oculatus
ENSXETG00000032402	-	87	35.043	ENSLOCG00000000297	-	90	34.746	Lepisosteus_oculatus
ENSXETG00000032402	-	86	31.973	ENSLOCG00000010606	-	99	31.973	Lepisosteus_oculatus
ENSXETG00000032402	-	87	30.709	ENSLOCG00000000320	-	87	30.894	Lepisosteus_oculatus
ENSXETG00000032402	-	87	33.557	ENSLOCG00000017639	-	92	32.335	Lepisosteus_oculatus
ENSXETG00000032402	-	80	36.029	ENSLOCG00000017305	-	93	36.029	Lepisosteus_oculatus
ENSXETG00000032402	-	87	34.228	ENSLOCG00000017303	-	88	33.533	Lepisosteus_oculatus
ENSXETG00000032402	-	85	35.862	ENSLOCG00000017302	-	84	35.862	Lepisosteus_oculatus
ENSXETG00000032402	-	87	34.228	ENSLOCG00000018355	-	91	32.903	Lepisosteus_oculatus
ENSXETG00000032402	-	76	36.923	ENSLOCG00000017824	-	93	36.923	Lepisosteus_oculatus
ENSXETG00000032402	-	84	31.469	ENSLOCG00000018075	-	73	31.469	Lepisosteus_oculatus
ENSXETG00000032402	-	84	34.028	ENSLOCG00000012680	-	92	32.450	Lepisosteus_oculatus
ENSXETG00000032402	-	87	33.793	ENSLOCG00000000632	-	85	33.793	Lepisosteus_oculatus
ENSXETG00000032402	-	75	36.719	ENSLOCG00000017641	-	90	36.719	Lepisosteus_oculatus
ENSXETG00000032402	-	84	35.664	ENSLOCG00000017530	-	88	34.437	Lepisosteus_oculatus
ENSXETG00000032402	-	81	35.652	ENSLOCG00000008338	-	91	33.333	Lepisosteus_oculatus
ENSXETG00000032402	-	93	36.478	ENSLOCG00000017974	-	91	34.078	Lepisosteus_oculatus
ENSXETG00000032402	-	86	33.333	ENSLOCG00000017670	-	91	32.121	Lepisosteus_oculatus
ENSXETG00000032402	-	93	34.177	ENSLOCG00000017867	-	92	33.750	Lepisosteus_oculatus
ENSXETG00000032402	-	93	31.447	ENSLOCG00000006695	-	92	31.875	Lepisosteus_oculatus
ENSXETG00000032402	-	99	40.314	ENSLAFG00000030593	ZCCHC3	70	40.314	Loxodonta_africana
ENSXETG00000032402	-	75	33.858	ENSMZEG00005028547	-	94	33.858	Maylandia_zebra
ENSXETG00000032402	-	89	30.464	ENSMZEG00005028553	-	73	30.464	Maylandia_zebra
ENSXETG00000032402	-	89	30.464	ENSMZEG00005028130	-	71	30.464	Maylandia_zebra
ENSXETG00000032402	-	93	33.889	ENSMMOG00000004516	-	54	33.889	Mola_mola
ENSXETG00000032402	-	93	31.111	ENSNBRG00000022137	-	88	31.461	Neolamprologus_brichardi
ENSXETG00000032402	-	99	40.314	ENSOCUG00000017024	ZCCHC3	50	40.314	Oryctolagus_cuniculus
ENSXETG00000032402	-	99	39.791	ENSOARG00000019161	ZCCHC3	66	39.791	Ovis_aries
ENSXETG00000032402	-	99	40.314	ENSPPAG00000010453	-	72	40.314	Pan_paniscus
ENSXETG00000032402	-	99	37.696	ENSPTIG00000009393	ZCCHC3	76	37.696	Panthera_tigris_altaica
ENSXETG00000032402	-	65	33.945	ENSPKIG00000015924	-	65	33.945	Paramormyrops_kingsleyae
ENSXETG00000032402	-	77	33.333	ENSPNYG00000015964	-	70	33.083	Pundamilia_nyererei
ENSXETG00000032402	-	83	36.170	ENSPNYG00000002656	-	83	36.301	Pundamilia_nyererei
ENSXETG00000032402	-	54	34.286	ENSPNAG00000002955	-	74	34.286	Pygocentrus_nattereri
ENSXETG00000032402	-	77	35.115	ENSPNAG00000010555	-	76	34.783	Pygocentrus_nattereri
ENSXETG00000032402	-	58	35.354	ENSSFOG00015016511	-	59	35.354	Scleropages_formosus
ENSXETG00000032402	-	80	31.387	ENSSFOG00015015819	-	59	32.479	Scleropages_formosus
ENSXETG00000032402	-	78	33.582	ENSSFOG00015012405	-	72	33.582	Scleropages_formosus
ENSXETG00000032402	-	99	40.314	ENSVPAG00000011267	-	77	40.314	Vicugna_pacos