EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000032798 (Gene tree)
Gene ID: -
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 67509 bases
Position: chrGL173351.1:315640-383148
Accession: 100496866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000062879	rRNA_proc-arch	PF13234.6	2.5e-89	1	1
ENSXETP00000062879	DEAD	PF00270.29	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064922	MTREX-201	3096	-	ENSXETP00000062879	1031 (aa)	XP_002941157	F6R3F1

Gene Model

Click here to download ENSXETG00000032798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000032798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000032798	MTREX	90	36.603	ENSXETG00000010932	skiv2l	78	36.603

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000032798	MTREX	100	88.303	ENSG00000039123	MTREX	100	88.303	Homo_sapiens
ENSXETG00000032798	MTREX	100	84.697	ENSAPOG00000007814	mtrex	100	84.697	Acanthochromis_polyacanthus
ENSXETG00000032798	MTREX	100	88.793	ENSAMEG00000013856	MTREX	100	88.793	Ailuropoda_melanoleuca
ENSXETG00000032798	MTREX	100	82.995	ENSACIG00000015117	mtrex	100	82.995	Amphilophus_citrinellus
ENSXETG00000032798	MTREX	100	84.986	ENSAOCG00000011884	mtrex	100	84.986	Amphiprion_ocellaris
ENSXETG00000032798	MTREX	100	84.986	ENSAPEG00000019384	mtrex	100	84.986	Amphiprion_percula
ENSXETG00000032798	MTREX	100	85.549	ENSATEG00000015117	mtrex	100	85.549	Anabas_testudineus
ENSXETG00000032798	MTREX	97	89.610	ENSAPLG00000009694	MTREX	99	89.610	Anas_platyrhynchos
ENSXETG00000032798	MTREX	100	89.423	ENSACAG00000015200	MTREX	96	89.423	Anolis_carolinensis
ENSXETG00000032798	MTREX	100	88.591	ENSANAG00000023095	MTREX	100	88.591	Aotus_nancymaae
ENSXETG00000032798	MTREX	100	84.601	ENSACLG00000001921	mtrex	100	84.697	Astatotilapia_calliptera
ENSXETG00000032798	MTREX	95	86.018	ENSAMXG00000018751	mtrex	99	85.931	Astyanax_mexicanus
ENSXETG00000032798	MTREX	100	88.410	ENSBTAG00000010518	MTREX	100	88.602	Bos_taurus
ENSXETG00000032798	MTREX	92	54.774	WBGene00012342	mtr-4	92	54.774	Caenorhabditis_elegans
ENSXETG00000032798	MTREX	100	87.571	ENSCJAG00000001773	MTREX	100	87.524	Callithrix_jacchus
ENSXETG00000032798	MTREX	100	88.591	ENSCAFG00000006818	MTREX	100	88.591	Canis_familiaris
ENSXETG00000032798	MTREX	100	88.591	ENSCAFG00020024352	MTREX	100	88.591	Canis_lupus_dingo
ENSXETG00000032798	MTREX	100	88.337	ENSCHIG00000024413	MTREX	100	88.528	Capra_hircus
ENSXETG00000032798	MTREX	93	89.408	ENSTSYG00000007389	MTREX	100	89.408	Carlito_syrichta
ENSXETG00000032798	MTREX	97	67.200	ENSCAPG00000008696	MTREX	99	67.200	Cavia_aperea
ENSXETG00000032798	MTREX	100	88.495	ENSCPOG00000009797	MTREX	100	88.495	Cavia_porcellus
ENSXETG00000032798	MTREX	100	88.495	ENSCCAG00000014177	MTREX	100	88.495	Cebus_capucinus
ENSXETG00000032798	MTREX	100	88.495	ENSCATG00000042153	MTREX	100	88.495	Cercocebus_atys
ENSXETG00000032798	MTREX	100	88.399	ENSCLAG00000006622	MTREX	100	88.686	Chinchilla_lanigera
ENSXETG00000032798	MTREX	100	84.512	ENSCSAG00000016445	MTREX	100	84.512	Chlorocebus_sabaeus
ENSXETG00000032798	MTREX	69	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSXETG00000032798	MTREX	100	89.382	ENSCPBG00000026551	MTREX	94	89.961	Chrysemys_picta_bellii
ENSXETG00000032798	MTREX	99	66.473	ENSCING00000003239	-	99	66.988	Ciona_intestinalis
ENSXETG00000032798	MTREX	99	66.152	ENSCSAVG00000009304	-	100	70.323	Ciona_savignyi
ENSXETG00000032798	MTREX	100	88.591	ENSCANG00000035770	MTREX	100	88.591	Colobus_angolensis_palliatus
ENSXETG00000032798	MTREX	100	88.804	ENSCGRG00001024680	Mtrex	100	89.091	Cricetulus_griseus_chok1gshd
ENSXETG00000032798	MTREX	100	88.804	ENSCGRG00000000307	Mtrex	100	89.091	Cricetulus_griseus_crigri
ENSXETG00000032798	MTREX	100	84.474	ENSCSEG00000018621	mtrex	98	84.474	Cynoglossus_semilaevis
ENSXETG00000032798	MTREX	100	84.793	ENSCVAG00000004556	mtrex	100	84.778	Cyprinodon_variegatus
ENSXETG00000032798	MTREX	100	86.583	ENSDARG00000013457	mtrex	100	86.583	Danio_rerio
ENSXETG00000032798	MTREX	100	87.775	ENSDNOG00000015375	MTREX	100	87.775	Dasypus_novemcinctus
ENSXETG00000032798	MTREX	100	88.591	ENSDORG00000006782	Mtrex	100	88.591	Dipodomys_ordii
ENSXETG00000032798	MTREX	99	63.033	FBgn0001986	Mtr4	99	63.033	Drosophila_melanogaster
ENSXETG00000032798	MTREX	90	72.627	ENSETEG00000000727	MTREX	90	72.627	Echinops_telfairi
ENSXETG00000032798	MTREX	99	74.563	ENSEBUG00000012869	mtrex	99	74.563	Eptatretus_burgeri
ENSXETG00000032798	MTREX	100	88.686	ENSEASG00005013270	MTREX	100	88.686	Equus_asinus_asinus
ENSXETG00000032798	MTREX	100	88.782	ENSECAG00000023723	MTREX	100	93.056	Equus_caballus
ENSXETG00000032798	MTREX	98	80.623	ENSEEUG00000000527	MTREX	100	80.623	Erinaceus_europaeus
ENSXETG00000032798	MTREX	98	86.373	ENSELUG00000004898	mtrex	100	89.706	Esox_lucius
ENSXETG00000032798	MTREX	100	88.782	ENSFCAG00000010575	MTREX	100	88.782	Felis_catus
ENSXETG00000032798	MTREX	100	88.332	ENSFALG00000010850	MTREX	100	88.428	Ficedula_albicollis
ENSXETG00000032798	MTREX	100	87.896	ENSFDAG00000011199	MTREX	100	87.896	Fukomys_damarensis
ENSXETG00000032798	MTREX	100	84.697	ENSFHEG00000023014	mtrex	100	83.157	Fundulus_heteroclitus
ENSXETG00000032798	MTREX	100	81.196	ENSGMOG00000014702	mtrex	100	81.581	Gadus_morhua
ENSXETG00000032798	MTREX	100	89.835	ENSGALG00000014709	MTREX	86	89.835	Gallus_gallus
ENSXETG00000032798	MTREX	100	85.274	ENSGAFG00000012425	mtrex	100	85.274	Gambusia_affinis
ENSXETG00000032798	MTREX	100	80.154	ENSGACG00000016260	mtrex	96	85.761	Gasterosteus_aculeatus
ENSXETG00000032798	MTREX	100	89.865	ENSGAGG00000020036	MTREX	100	89.865	Gopherus_agassizii
ENSXETG00000032798	MTREX	100	88.399	ENSGGOG00000001867	MTREX	100	88.399	Gorilla_gorilla
ENSXETG00000032798	MTREX	100	84.601	ENSHBUG00000006229	mtrex	100	84.697	Haplochromis_burtoni
ENSXETG00000032798	MTREX	100	88.280	ENSHGLG00000019445	SKIV2L2	100	88.473	Heterocephalus_glaber_female
ENSXETG00000032798	MTREX	100	88.280	ENSHGLG00100011833	SKIV2L2	100	88.473	Heterocephalus_glaber_male
ENSXETG00000032798	MTREX	92	84.318	ENSHCOG00000019995	mtrex	100	84.318	Hippocampus_comes
ENSXETG00000032798	MTREX	100	85.701	ENSIPUG00000024348	skiv2l2	100	85.701	Ictalurus_punctatus
ENSXETG00000032798	MTREX	100	88.591	ENSSTOG00000010802	MTREX	100	88.878	Ictidomys_tridecemlineatus
ENSXETG00000032798	MTREX	100	83.477	ENSJJAG00000020975	Mtrex	100	83.573	Jaculus_jaculus
ENSXETG00000032798	MTREX	100	84.297	ENSKMAG00000012642	mtrex	100	84.297	Kryptolebias_marmoratus
ENSXETG00000032798	MTREX	100	85.014	ENSLBEG00000019367	mtrex	99	86.027	Labrus_bergylta
ENSXETG00000032798	MTREX	100	90.154	ENSLACG00000009075	MTREX	100	90.154	Latimeria_chalumnae
ENSXETG00000032798	MTREX	100	88.190	ENSLOCG00000010186	mtrex	100	88.190	Lepisosteus_oculatus
ENSXETG00000032798	MTREX	99	86.002	ENSLAFG00000010497	MTREX	100	86.372	Loxodonta_africana
ENSXETG00000032798	MTREX	100	88.495	ENSMFAG00000031610	MTREX	100	88.495	Macaca_fascicularis
ENSXETG00000032798	MTREX	100	88.134	ENSMMUG00000010379	MTREX	100	88.134	Macaca_mulatta
ENSXETG00000032798	MTREX	100	88.495	ENSMNEG00000032746	MTREX	100	88.495	Macaca_nemestrina
ENSXETG00000032798	MTREX	100	88.495	ENSMLEG00000041051	MTREX	100	88.495	Mandrillus_leucophaeus
ENSXETG00000032798	MTREX	100	83.977	ENSMAMG00000016753	mtrex	97	87.513	Mastacembelus_armatus
ENSXETG00000032798	MTREX	100	84.601	ENSMZEG00005000414	mtrex	100	84.697	Maylandia_zebra
ENSXETG00000032798	MTREX	95	65.992	ENSMGAG00000003980	MTREX	99	65.992	Meleagris_gallopavo
ENSXETG00000032798	MTREX	100	88.868	ENSMAUG00000010727	Mtrex	100	89.155	Mesocricetus_auratus
ENSXETG00000032798	MTREX	100	88.686	ENSMICG00000012779	MTREX	100	88.686	Microcebus_murinus
ENSXETG00000032798	MTREX	100	88.495	ENSMOCG00000019886	Mtrex	100	88.495	Microtus_ochrogaster
ENSXETG00000032798	MTREX	100	82.257	ENSMMOG00000002476	mtrex	100	82.257	Mola_mola
ENSXETG00000032798	MTREX	100	89.072	ENSMODG00000019494	MTREX	100	89.168	Monodelphis_domestica
ENSXETG00000032798	MTREX	100	75.579	ENSMALG00000002917	mtrex	99	82.449	Monopterus_albus
ENSXETG00000032798	MTREX	100	88.410	MGP_CAROLIEiJ_G0018896	Mtrex	100	88.410	Mus_caroli
ENSXETG00000032798	MTREX	100	88.410	ENSMUSG00000016018	Mtrex	100	88.410	Mus_musculus
ENSXETG00000032798	MTREX	100	88.314	MGP_PahariEiJ_G0015967	Mtrex	100	88.314	Mus_pahari
ENSXETG00000032798	MTREX	100	88.410	MGP_SPRETEiJ_G0019775	Mtrex	100	88.410	Mus_spretus
ENSXETG00000032798	MTREX	100	88.878	ENSMPUG00000007619	MTREX	100	88.878	Mustela_putorius_furo
ENSXETG00000032798	MTREX	100	88.410	ENSMLUG00000001152	MTREX	100	88.410	Myotis_lucifugus
ENSXETG00000032798	MTREX	100	88.399	ENSNGAG00000011938	Mtrex	100	88.399	Nannospalax_galili
ENSXETG00000032798	MTREX	100	84.601	ENSNBRG00000011293	mtrex	100	84.697	Neolamprologus_brichardi
ENSXETG00000032798	MTREX	100	84.402	ENSNLEG00000001494	MTREX	100	84.689	Nomascus_leucogenys
ENSXETG00000032798	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSXETG00000032798	MTREX	100	75.000	ENSOPRG00000008009	MTREX	100	75.288	Ochotona_princeps
ENSXETG00000032798	MTREX	100	87.824	ENSODEG00000017234	MTREX	100	87.824	Octodon_degus
ENSXETG00000032798	MTREX	100	84.697	ENSONIG00000007587	mtrex	100	84.793	Oreochromis_niloticus
ENSXETG00000032798	MTREX	50	89.648	ENSOANG00000004885	-	99	89.648	Ornithorhynchus_anatinus
ENSXETG00000032798	MTREX	100	88.953	ENSOCUG00000004463	MTREX	100	88.953	Oryctolagus_cuniculus
ENSXETG00000032798	MTREX	100	84.601	ENSORLG00000005443	mtrex	100	84.601	Oryzias_latipes
ENSXETG00000032798	MTREX	100	84.601	ENSORLG00020006329	mtrex	100	84.601	Oryzias_latipes_hni
ENSXETG00000032798	MTREX	100	84.601	ENSORLG00015012924	mtrex	100	84.601	Oryzias_latipes_hsok
ENSXETG00000032798	MTREX	100	83.877	ENSOMEG00000008825	mtrex	100	83.877	Oryzias_melastigma
ENSXETG00000032798	MTREX	100	88.495	ENSOGAG00000002886	MTREX	100	88.118	Otolemur_garnettii
ENSXETG00000032798	MTREX	100	88.084	ENSOARG00000007764	MTREX	100	88.275	Ovis_aries
ENSXETG00000032798	MTREX	100	88.303	ENSPPAG00000039291	MTREX	100	88.303	Pan_paniscus
ENSXETG00000032798	MTREX	100	88.782	ENSPPRG00000019701	MTREX	100	88.782	Panthera_pardus
ENSXETG00000032798	MTREX	100	87.344	ENSPTIG00000009313	MTREX	100	87.344	Panthera_tigris_altaica
ENSXETG00000032798	MTREX	100	88.303	ENSPTRG00000016878	MTREX	100	88.303	Pan_troglodytes
ENSXETG00000032798	MTREX	100	88.399	ENSPANG00000009697	MTREX	100	88.399	Papio_anubis
ENSXETG00000032798	MTREX	100	87.838	ENSPKIG00000020833	mtrex	100	87.838	Paramormyrops_kingsleyae
ENSXETG00000032798	MTREX	100	89.555	ENSPSIG00000012150	MTREX	100	90.329	Pelodiscus_sinensis
ENSXETG00000032798	MTREX	100	81.985	ENSPMGG00000002582	mtrex	100	81.985	Periophthalmus_magnuspinnatus
ENSXETG00000032798	MTREX	95	66.869	ENSPMAG00000009668	mtrex	100	66.869	Petromyzon_marinus
ENSXETG00000032798	MTREX	92	93.031	ENSPCIG00000024730	MTREX	100	93.031	Phascolarctos_cinereus
ENSXETG00000032798	MTREX	76	86.946	ENSPFOG00000003141	mtrex	100	87.183	Poecilia_formosa
ENSXETG00000032798	MTREX	100	85.192	ENSPLAG00000021311	mtrex	100	85.274	Poecilia_latipinna
ENSXETG00000032798	MTREX	92	87.618	ENSPMEG00000010597	mtrex	99	87.933	Poecilia_mexicana
ENSXETG00000032798	MTREX	100	84.697	ENSPREG00000003089	mtrex	100	84.778	Poecilia_reticulata
ENSXETG00000032798	MTREX	98	88.207	ENSPPYG00000015469	MTREX	98	88.207	Pongo_abelii
ENSXETG00000032798	MTREX	94	76.744	ENSPCAG00000013120	MTREX	94	76.744	Procavia_capensis
ENSXETG00000032798	MTREX	99	83.053	ENSPCOG00000018092	MTREX	100	83.053	Propithecus_coquereli
ENSXETG00000032798	MTREX	100	88.686	ENSPVAG00000002445	MTREX	100	88.686	Pteropus_vampyrus
ENSXETG00000032798	MTREX	100	84.504	ENSPNYG00000006164	mtrex	100	84.601	Pundamilia_nyererei
ENSXETG00000032798	MTREX	100	86.910	ENSPNAG00000008794	mtrex	100	86.910	Pygocentrus_nattereri
ENSXETG00000032798	MTREX	99	87.899	ENSRNOG00000010125	Mtrex	97	87.899	Rattus_norvegicus
ENSXETG00000032798	MTREX	100	86.769	ENSRBIG00000034930	MTREX	100	86.769	Rhinopithecus_bieti
ENSXETG00000032798	MTREX	100	88.399	ENSRROG00000039895	MTREX	100	88.399	Rhinopithecus_roxellana
ENSXETG00000032798	MTREX	90	56.080	YJL050W	MTR4	99	52.275	Saccharomyces_cerevisiae
ENSXETG00000032798	MTREX	100	88.495	ENSSBOG00000026693	MTREX	100	88.495	Saimiri_boliviensis_boliviensis
ENSXETG00000032798	MTREX	97	90.281	ENSSHAG00000004600	MTREX	100	90.281	Sarcophilus_harrisii
ENSXETG00000032798	MTREX	100	88.309	ENSSFOG00015014355	skiv2l2	100	88.309	Scleropages_formosus
ENSXETG00000032798	MTREX	100	84.438	ENSSMAG00000007572	mtrex	100	84.438	Scophthalmus_maximus
ENSXETG00000032798	MTREX	100	85.178	ENSSDUG00000023789	mtrex	100	85.178	Seriola_dumerili
ENSXETG00000032798	MTREX	100	85.082	ENSSLDG00000006301	mtrex	100	85.082	Seriola_lalandi_dorsalis
ENSXETG00000032798	MTREX	92	93.060	ENSSARG00000008387	MTREX	100	86.845	Sorex_araneus
ENSXETG00000032798	MTREX	100	77.660	ENSSPUG00000007071	MTREX	100	77.660	Sphenodon_punctatus
ENSXETG00000032798	MTREX	100	82.495	ENSSPAG00000011319	mtrex	100	82.979	Stegastes_partitus
ENSXETG00000032798	MTREX	100	88.686	ENSSSCG00000016911	MTREX	100	88.686	Sus_scrofa
ENSXETG00000032798	MTREX	100	87.645	ENSTGUG00000002480	MTREX	100	87.645	Taeniopygia_guttata
ENSXETG00000032798	MTREX	100	82.964	ENSTRUG00000014571	mtrex	100	82.964	Takifugu_rubripes
ENSXETG00000032798	MTREX	100	73.058	ENSTBEG00000007769	MTREX	100	73.250	Tupaia_belangeri
ENSXETG00000032798	MTREX	100	88.184	ENSTTRG00000008678	MTREX	100	88.377	Tursiops_truncatus
ENSXETG00000032798	MTREX	100	88.623	ENSUAMG00000023061	MTREX	100	88.719	Ursus_americanus
ENSXETG00000032798	MTREX	100	88.577	ENSUMAG00000009373	MTREX	99	93.563	Ursus_maritimus
ENSXETG00000032798	MTREX	100	78.817	ENSVPAG00000011174	MTREX	100	78.817	Vicugna_pacos
ENSXETG00000032798	MTREX	100	88.686	ENSVVUG00000021337	MTREX	100	88.686	Vulpes_vulpes
ENSXETG00000032798	MTREX	100	84.793	ENSXMAG00000004799	mtrex	100	84.682	Xiphophorus_maculatus