EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000032869 (Gene tree)
Gene ID: -
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 33242 bases
Position: chrGL172642.1:4355262-4388503
Accession: 100101755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000062476	CPSF_A	PF03178.15	2.6e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064475	SF3B3-201	4586	XM_002931659	ENSXETP00000062476	1217 (aa)	XP_002931705	F6ZI40

Gene Model

Click here to download ENSXETG00000032869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000032869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000032869	SF3B3	100	96.713	ENSG00000189091	SF3B3	100	96.713	Homo_sapiens
ENSXETG00000032869	SF3B3	96	93.766	ENSAPOG00000006172	sf3b3	98	93.766	Acanthochromis_polyacanthus
ENSXETG00000032869	SF3B3	100	96.557	ENSAMEG00000002187	SF3B3	100	96.557	Ailuropoda_melanoleuca
ENSXETG00000032869	SF3B3	92	90.893	ENSACIG00000016487	sf3b3	100	90.893	Amphilophus_citrinellus
ENSXETG00000032869	SF3B3	100	93.837	ENSAOCG00000007158	sf3b3	100	93.837	Amphiprion_ocellaris
ENSXETG00000032869	SF3B3	100	93.837	ENSAPEG00000022786	sf3b3	100	93.837	Amphiprion_percula
ENSXETG00000032869	SF3B3	100	93.673	ENSATEG00000013708	sf3b3	100	93.673	Anabas_testudineus
ENSXETG00000032869	SF3B3	81	95.846	ENSAPLG00000004996	SF3B3	100	95.846	Anas_platyrhynchos
ENSXETG00000032869	SF3B3	100	96.302	ENSACAG00000001817	SF3B3	100	96.302	Anolis_carolinensis
ENSXETG00000032869	SF3B3	100	96.713	ENSANAG00000028001	SF3B3	100	96.713	Aotus_nancymaae
ENSXETG00000032869	SF3B3	96	93.339	ENSACLG00000022555	sf3b3	98	93.339	Astatotilapia_calliptera
ENSXETG00000032869	SF3B3	100	93.344	ENSAMXG00000003410	sf3b3	100	93.344	Astyanax_mexicanus
ENSXETG00000032869	SF3B3	100	96.713	ENSBTAG00000010627	SF3B3	100	96.713	Bos_taurus
ENSXETG00000032869	SF3B3	100	60.212	WBGene00019323	teg-4	100	60.212	Caenorhabditis_elegans
ENSXETG00000032869	SF3B3	100	96.713	ENSCJAG00000014773	SF3B3	99	96.713	Callithrix_jacchus
ENSXETG00000032869	SF3B3	100	96.795	ENSCAFG00000020151	SF3B3	100	96.795	Canis_familiaris
ENSXETG00000032869	SF3B3	100	96.795	ENSCAFG00020020912	SF3B3	100	96.795	Canis_lupus_dingo
ENSXETG00000032869	SF3B3	100	96.795	ENSCHIG00000019822	SF3B3	100	96.795	Capra_hircus
ENSXETG00000032869	SF3B3	100	96.713	ENSTSYG00000007910	SF3B3	100	96.713	Carlito_syrichta
ENSXETG00000032869	SF3B3	84	84.897	ENSCAPG00000001484	SF3B3	92	84.897	Cavia_aperea
ENSXETG00000032869	SF3B3	100	95.399	ENSCPOG00000000586	SF3B3	100	95.399	Cavia_porcellus
ENSXETG00000032869	SF3B3	100	96.713	ENSCCAG00000017736	SF3B3	100	96.713	Cebus_capucinus
ENSXETG00000032869	SF3B3	100	96.713	ENSCATG00000036562	SF3B3	100	96.713	Cercocebus_atys
ENSXETG00000032869	SF3B3	100	96.713	ENSCLAG00000003921	SF3B3	100	96.713	Chinchilla_lanigera
ENSXETG00000032869	SF3B3	100	96.631	ENSCSAG00000004371	SF3B3	100	96.631	Chlorocebus_sabaeus
ENSXETG00000032869	SF3B3	90	90.654	ENSCHOG00000001878	SF3B3	90	90.654	Choloepus_hoffmanni
ENSXETG00000032869	SF3B3	100	96.056	ENSCPBG00000015853	SF3B3	100	96.056	Chrysemys_picta_bellii
ENSXETG00000032869	SF3B3	100	80.131	ENSCING00000001342	-	100	80.131	Ciona_intestinalis
ENSXETG00000032869	SF3B3	99	78.736	ENSCSAVG00000011454	-	100	78.736	Ciona_savignyi
ENSXETG00000032869	SF3B3	100	93.509	ENSCANG00000042920	SF3B3	100	93.509	Colobus_angolensis_palliatus
ENSXETG00000032869	SF3B3	100	96.631	ENSCGRG00001015908	Sf3b3	100	96.631	Cricetulus_griseus_chok1gshd
ENSXETG00000032869	SF3B3	100	96.631	ENSCGRG00000010180	Sf3b3	100	96.631	Cricetulus_griseus_crigri
ENSXETG00000032869	SF3B3	82	92.814	ENSCSEG00000014192	sf3b3	99	92.814	Cynoglossus_semilaevis
ENSXETG00000032869	SF3B3	100	92.851	ENSCVAG00000010459	sf3b3	100	92.851	Cyprinodon_variegatus
ENSXETG00000032869	SF3B3	100	93.098	ENSDARG00000103553	sf3b3	100	93.098	Danio_rerio
ENSXETG00000032869	SF3B3	85	96.818	ENSDNOG00000043626	SF3B3	100	96.818	Dasypus_novemcinctus
ENSXETG00000032869	SF3B3	100	96.713	ENSDORG00000014176	Sf3b3	100	96.713	Dipodomys_ordii
ENSXETG00000032869	SF3B3	100	74.654	FBgn0035162	Sf3b3	100	74.654	Drosophila_melanogaster
ENSXETG00000032869	SF3B3	84	97.046	ENSETEG00000002729	SF3B3	84	97.046	Echinops_telfairi
ENSXETG00000032869	SF3B3	100	87.264	ENSEBUG00000006117	sf3b3	100	87.264	Eptatretus_burgeri
ENSXETG00000032869	SF3B3	100	96.795	ENSEASG00005013376	SF3B3	100	96.795	Equus_asinus_asinus
ENSXETG00000032869	SF3B3	100	96.795	ENSECAG00000014053	SF3B3	100	96.795	Equus_caballus
ENSXETG00000032869	SF3B3	93	95.893	ENSEEUG00000015611	SF3B3	93	95.893	Erinaceus_europaeus
ENSXETG00000032869	SF3B3	100	91.393	ENSELUG00000015417	sf3b3	100	91.393	Esox_lucius
ENSXETG00000032869	SF3B3	100	96.795	ENSFCAG00000009487	SF3B3	100	96.795	Felis_catus
ENSXETG00000032869	SF3B3	100	96.220	ENSFALG00000007372	SF3B3	100	96.220	Ficedula_albicollis
ENSXETG00000032869	SF3B3	100	96.631	ENSFDAG00000002608	SF3B3	100	96.631	Fukomys_damarensis
ENSXETG00000032869	SF3B3	100	93.262	ENSFHEG00000017824	sf3b3	100	93.262	Fundulus_heteroclitus
ENSXETG00000032869	SF3B3	100	89.245	ENSGMOG00000008139	sf3b3	100	89.245	Gadus_morhua
ENSXETG00000032869	SF3B3	100	96.302	ENSGALG00000002531	SF3B3	100	96.302	Gallus_gallus
ENSXETG00000032869	SF3B3	100	92.933	ENSGAFG00000015206	sf3b3	100	92.933	Gambusia_affinis
ENSXETG00000032869	SF3B3	100	93.432	ENSGACG00000002646	sf3b3	100	93.432	Gasterosteus_aculeatus
ENSXETG00000032869	SF3B3	96	96.243	ENSGAGG00000006746	SF3B3	97	96.243	Gopherus_agassizii
ENSXETG00000032869	SF3B3	100	96.713	ENSGGOG00000003246	SF3B3	100	96.713	Gorilla_gorilla
ENSXETG00000032869	SF3B3	92	85.982	ENSHBUG00000005960	sf3b3	100	87.143	Haplochromis_burtoni
ENSXETG00000032869	SF3B3	100	96.713	ENSHGLG00000010135	SF3B3	100	96.713	Heterocephalus_glaber_female
ENSXETG00000032869	SF3B3	100	94.566	ENSHGLG00100011148	SF3B3	100	94.566	Heterocephalus_glaber_male
ENSXETG00000032869	SF3B3	100	93.098	ENSHCOG00000011981	sf3b3	100	93.098	Hippocampus_comes
ENSXETG00000032869	SF3B3	100	93.180	ENSIPUG00000020435	sf3b3	100	93.180	Ictalurus_punctatus
ENSXETG00000032869	SF3B3	100	96.713	ENSSTOG00000007065	SF3B3	100	96.713	Ictidomys_tridecemlineatus
ENSXETG00000032869	SF3B3	100	96.713	ENSJJAG00000003948	Sf3b3	100	96.713	Jaculus_jaculus
ENSXETG00000032869	SF3B3	100	91.208	ENSKMAG00000004066	sf3b3	99	93.254	Kryptolebias_marmoratus
ENSXETG00000032869	SF3B3	100	93.591	ENSLBEG00000018302	sf3b3	100	93.591	Labrus_bergylta
ENSXETG00000032869	SF3B3	98	91.362	ENSLACG00000012501	SF3B3	99	91.362	Latimeria_chalumnae
ENSXETG00000032869	SF3B3	100	93.432	ENSLOCG00000007566	sf3b3	100	93.432	Lepisosteus_oculatus
ENSXETG00000032869	SF3B3	100	96.795	ENSLAFG00000012219	SF3B3	100	96.795	Loxodonta_africana
ENSXETG00000032869	SF3B3	100	96.713	ENSMFAG00000045487	SF3B3	100	96.713	Macaca_fascicularis
ENSXETG00000032869	SF3B3	100	96.713	ENSMMUG00000017812	SF3B3	100	96.713	Macaca_mulatta
ENSXETG00000032869	SF3B3	100	96.713	ENSMNEG00000033385	SF3B3	100	96.713	Macaca_nemestrina
ENSXETG00000032869	SF3B3	100	93.180	ENSMLEG00000043891	SF3B3	100	93.180	Mandrillus_leucophaeus
ENSXETG00000032869	SF3B3	100	94.002	ENSMAMG00000016837	sf3b3	100	94.002	Mastacembelus_armatus
ENSXETG00000032869	SF3B3	100	93.426	ENSMZEG00005010836	sf3b3	100	93.426	Maylandia_zebra
ENSXETG00000032869	SF3B3	89	90.564	ENSMZEG00005026015	sf3b3	99	90.564	Maylandia_zebra
ENSXETG00000032869	SF3B3	100	96.302	ENSMGAG00000001597	SF3B3	100	96.302	Meleagris_gallopavo
ENSXETG00000032869	SF3B3	81	78.836	ENSMAUG00000013618	Sf3b3	95	78.836	Mesocricetus_auratus
ENSXETG00000032869	SF3B3	100	95.570	ENSMICG00000001363	SF3B3	100	95.570	Microcebus_murinus
ENSXETG00000032869	SF3B3	100	96.631	ENSMOCG00000006108	Sf3b3	100	96.631	Microtus_ochrogaster
ENSXETG00000032869	SF3B3	89	90.657	ENSMMOG00000002598	sf3b3	97	90.657	Mola_mola
ENSXETG00000032869	SF3B3	100	92.365	ENSMODG00000014363	SF3B3	100	92.365	Monodelphis_domestica
ENSXETG00000032869	SF3B3	100	93.509	ENSMALG00000008014	sf3b3	100	93.509	Monopterus_albus
ENSXETG00000032869	SF3B3	100	96.713	MGP_CAROLIEiJ_G0031563	Sf3b3	100	96.713	Mus_caroli
ENSXETG00000032869	SF3B3	100	96.631	ENSMUSG00000033732	Sf3b3	100	96.631	Mus_musculus
ENSXETG00000032869	SF3B3	100	96.549	MGP_SPRETEiJ_G0032681	Sf3b3	100	96.549	Mus_spretus
ENSXETG00000032869	SF3B3	100	96.795	ENSMPUG00000010277	SF3B3	100	96.795	Mustela_putorius_furo
ENSXETG00000032869	SF3B3	100	96.631	ENSMLUG00000014607	SF3B3	100	96.631	Myotis_lucifugus
ENSXETG00000032869	SF3B3	100	96.713	ENSNGAG00000021903	Sf3b3	100	96.713	Nannospalax_galili
ENSXETG00000032869	SF3B3	83	94.444	ENSNBRG00000007197	sf3b3	99	94.444	Neolamprologus_brichardi
ENSXETG00000032869	SF3B3	100	95.238	ENSNLEG00000016127	SF3B3	100	95.238	Nomascus_leucogenys
ENSXETG00000032869	SF3B3	92	93.668	ENSMEUG00000004479	SF3B3	94	93.668	Notamacropus_eugenii
ENSXETG00000032869	SF3B3	98	93.462	ENSOPRG00000009847	SF3B3	100	93.462	Ochotona_princeps
ENSXETG00000032869	SF3B3	100	96.631	ENSODEG00000014154	SF3B3	100	96.631	Octodon_degus
ENSXETG00000032869	SF3B3	100	93.673	ENSONIG00000011198	sf3b3	100	93.673	Oreochromis_niloticus
ENSXETG00000032869	SF3B3	100	96.713	ENSOANG00000001161	-	100	96.713	Ornithorhynchus_anatinus
ENSXETG00000032869	SF3B3	100	94.577	ENSOCUG00000004139	SF3B3	100	94.577	Oryctolagus_cuniculus
ENSXETG00000032869	SF3B3	100	93.673	ENSORLG00000013472	sf3b3	100	93.673	Oryzias_latipes
ENSXETG00000032869	SF3B3	100	93.673	ENSORLG00020017473	sf3b3	100	93.673	Oryzias_latipes_hni
ENSXETG00000032869	SF3B3	100	93.673	ENSORLG00015007710	sf3b3	100	93.673	Oryzias_latipes_hsok
ENSXETG00000032869	SF3B3	100	93.344	ENSOMEG00000014483	sf3b3	100	93.344	Oryzias_melastigma
ENSXETG00000032869	SF3B3	100	96.311	ENSOGAG00000016051	SF3B3	100	96.311	Otolemur_garnettii
ENSXETG00000032869	SF3B3	100	96.557	ENSOARG00000004816	SF3B3	100	96.557	Ovis_aries
ENSXETG00000032869	SF3B3	100	96.713	ENSPPAG00000026807	SF3B3	100	96.713	Pan_paniscus
ENSXETG00000032869	SF3B3	100	96.795	ENSPPRG00000001686	SF3B3	100	96.795	Panthera_pardus
ENSXETG00000032869	SF3B3	89	94.204	ENSPTIG00000020382	SF3B3	100	94.204	Panthera_tigris_altaica
ENSXETG00000032869	SF3B3	100	96.713	ENSPTRG00000008308	SF3B3	100	96.713	Pan_troglodytes
ENSXETG00000032869	SF3B3	100	96.713	ENSPANG00000024075	SF3B3	100	96.713	Papio_anubis
ENSXETG00000032869	SF3B3	100	92.523	ENSPKIG00000002712	sf3b3	100	92.523	Paramormyrops_kingsleyae
ENSXETG00000032869	SF3B3	89	96.412	ENSPSIG00000002232	SF3B3	100	96.412	Pelodiscus_sinensis
ENSXETG00000032869	SF3B3	100	96.631	ENSPEMG00000008603	Sf3b3	100	96.631	Peromyscus_maniculatus_bairdii
ENSXETG00000032869	SF3B3	100	91.290	ENSPMAG00000001793	sf3b3	100	91.290	Petromyzon_marinus
ENSXETG00000032869	SF3B3	100	96.713	ENSPCIG00000014927	SF3B3	100	96.713	Phascolarctos_cinereus
ENSXETG00000032869	SF3B3	100	92.933	ENSPFOG00000015516	sf3b3	100	92.933	Poecilia_formosa
ENSXETG00000032869	SF3B3	100	92.933	ENSPLAG00000014330	sf3b3	100	92.933	Poecilia_latipinna
ENSXETG00000032869	SF3B3	100	93.016	ENSPMEG00000019856	sf3b3	100	93.016	Poecilia_mexicana
ENSXETG00000032869	SF3B3	81	93.699	ENSPREG00000019669	sf3b3	97	93.699	Poecilia_reticulata
ENSXETG00000032869	SF3B3	95	96.689	ENSPPYG00000007539	SF3B3	100	96.689	Pongo_abelii
ENSXETG00000032869	SF3B3	100	75.596	ENSPCAG00000002623	SF3B3	100	75.596	Procavia_capensis
ENSXETG00000032869	SF3B3	84	98.131	ENSPCOG00000026582	SF3B3	100	98.131	Propithecus_coquereli
ENSXETG00000032869	SF3B3	100	96.713	ENSPVAG00000000684	SF3B3	100	96.713	Pteropus_vampyrus
ENSXETG00000032869	SF3B3	100	93.509	ENSPNYG00000003528	sf3b3	100	93.509	Pundamilia_nyererei
ENSXETG00000032869	SF3B3	100	93.262	ENSPNAG00000015419	sf3b3	100	93.262	Pygocentrus_nattereri
ENSXETG00000032869	SF3B3	100	96.631	ENSRNOG00000017724	Sf3b3	100	96.631	Rattus_norvegicus
ENSXETG00000032869	SF3B3	100	96.713	ENSRBIG00000021904	SF3B3	100	96.713	Rhinopithecus_bieti
ENSXETG00000032869	SF3B3	100	96.713	ENSRROG00000045703	SF3B3	100	96.713	Rhinopithecus_roxellana
ENSXETG00000032869	SF3B3	100	96.713	ENSSBOG00000029156	SF3B3	100	96.713	Saimiri_boliviensis_boliviensis
ENSXETG00000032869	SF3B3	100	96.713	ENSSHAG00000000372	SF3B3	100	96.713	Sarcophilus_harrisii
ENSXETG00000032869	SF3B3	100	93.591	ENSSFOG00015012877	sf3b3	100	93.591	Scleropages_formosus
ENSXETG00000032869	SF3B3	100	93.016	ENSSMAG00000014386	sf3b3	100	93.016	Scophthalmus_maximus
ENSXETG00000032869	SF3B3	100	93.919	ENSSDUG00000021201	sf3b3	100	93.919	Seriola_dumerili
ENSXETG00000032869	SF3B3	100	93.837	ENSSLDG00000017532	sf3b3	100	93.837	Seriola_lalandi_dorsalis
ENSXETG00000032869	SF3B3	93	96.783	ENSSARG00000006917	SF3B3	93	96.783	Sorex_araneus
ENSXETG00000032869	SF3B3	100	96.220	ENSSPUG00000006253	SF3B3	100	96.220	Sphenodon_punctatus
ENSXETG00000032869	SF3B3	100	86.196	ENSSPAG00000003125	sf3b3	100	86.196	Stegastes_partitus
ENSXETG00000032869	SF3B3	100	96.795	ENSSSCG00000025323	SF3B3	100	96.795	Sus_scrofa
ENSXETG00000032869	SF3B3	100	96.388	ENSTGUG00000006082	SF3B3	100	96.388	Taeniopygia_guttata
ENSXETG00000032869	SF3B3	89	93.199	ENSTNIG00000004857	sf3b3	100	93.199	Tetraodon_nigroviridis
ENSXETG00000032869	SF3B3	93	82.130	ENSTBEG00000002946	SF3B3	100	82.130	Tupaia_belangeri
ENSXETG00000032869	SF3B3	100	95.974	ENSTTRG00000005855	SF3B3	100	95.974	Tursiops_truncatus
ENSXETG00000032869	SF3B3	100	96.795	ENSUAMG00000006780	SF3B3	100	96.795	Ursus_americanus
ENSXETG00000032869	SF3B3	100	96.795	ENSUMAG00000017757	SF3B3	100	96.795	Ursus_maritimus
ENSXETG00000032869	SF3B3	100	81.019	ENSVPAG00000003202	SF3B3	100	81.019	Vicugna_pacos
ENSXETG00000032869	SF3B3	100	96.713	ENSVVUG00000017922	SF3B3	100	96.713	Vulpes_vulpes
ENSXETG00000032869	SF3B3	77	94.161	ENSXCOG00000013628	sf3b3	97	94.161	Xiphophorus_couchianus
ENSXETG00000032869	SF3B3	100	92.933	ENSXMAG00000006334	sf3b3	100	92.933	Xiphophorus_maculatus