EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000033143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 6693 bases
Position: chrGL173258.1:140776-147468
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060260	zf-CCHC	PF00098.23	8.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000062755	-	834	-	ENSXETP00000060260	278 (aa)	-	F7BNY9

Gene Model

Click here to download ENSXETG00000033143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000033143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000033143	-	92	50.833	ENSXETG00000033341	-	99	50.833
ENSXETG00000033143	-	100	36.082	ENSXETG00000030090	-	95	36.082
ENSXETG00000033143	-	81	58.784	ENSXETG00000032402	-	86	58.042
ENSXETG00000033143	-	85	97.500	ENSXETG00000033661	-	82	97.500
ENSXETG00000033143	-	91	47.826	ENSXETG00000032242	-	100	47.826
ENSXETG00000033143	-	82	52.564	ENSXETG00000033641	-	94	52.564
ENSXETG00000033143	-	85	97.500	ENSXETG00000033566	-	82	97.500
ENSXETG00000033143	-	85	96.250	ENSXETG00000030911	-	82	96.250
ENSXETG00000033143	-	81	54.110	ENSXETG00000031539	-	77	54.110
ENSXETG00000033143	-	85	97.500	ENSXETG00000034004	-	82	97.500
ENSXETG00000033143	-	86	97.500	ENSXETG00000033553	-	84	97.500
ENSXETG00000033143	-	81	59.184	ENSXETG00000031282	-	86	58.042
ENSXETG00000033143	-	85	97.500	ENSXETG00000034120	-	82	97.500
ENSXETG00000033143	-	87	58.784	ENSXETG00000032297	-	86	58.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000033143	-	90	40.506	ENSATEG00000004599	-	79	40.506	Anabas_testudineus
ENSXETG00000033143	-	91	38.462	ENSACLG00000011316	-	81	38.462	Astatotilapia_calliptera
ENSXETG00000033143	-	91	38.462	ENSACLG00000014014	-	80	38.462	Astatotilapia_calliptera
ENSXETG00000033143	-	74	37.349	ENSACLG00000019919	-	83	37.349	Astatotilapia_calliptera
ENSXETG00000033143	-	91	38.462	ENSACLG00000015881	-	83	38.462	Astatotilapia_calliptera
ENSXETG00000033143	-	92	34.014	ENSAMXG00000033087	-	59	34.014	Astyanax_mexicanus
ENSXETG00000033143	-	85	34.568	ENSAMXG00000035711	-	79	34.568	Astyanax_mexicanus
ENSXETG00000033143	-	83	43.709	ENSCAFG00000025206	ZCCHC3	54	43.709	Canis_familiaris
ENSXETG00000033143	-	83	43.709	ENSCANG00000010812	ZCCHC3	55	43.709	Colobus_angolensis_palliatus
ENSXETG00000033143	-	87	41.259	ENSELUG00000002602	-	76	41.259	Esox_lucius
ENSXETG00000033143	-	54	31.818	ENSGACG00000000773	-	89	31.818	Gasterosteus_aculeatus
ENSXETG00000033143	-	51	31.973	ENSGACG00000018075	-	86	31.973	Gasterosteus_aculeatus
ENSXETG00000033143	-	64	34.807	ENSHBUG00000011697	-	83	37.037	Haplochromis_burtoni
ENSXETG00000033143	-	74	38.889	ENSHBUG00000005879	-	51	36.170	Haplochromis_burtoni
ENSXETG00000033143	-	81	37.349	ENSHBUG00000001589	-	76	37.349	Haplochromis_burtoni
ENSXETG00000033143	-	81	43.919	ENSLACG00000002864	-	50	43.919	Latimeria_chalumnae
ENSXETG00000033143	-	88	46.104	ENSLACG00000003328	-	55	46.104	Latimeria_chalumnae
ENSXETG00000033143	-	54	32.258	ENSLOCG00000017530	-	90	32.258	Lepisosteus_oculatus
ENSXETG00000033143	-	94	32.456	ENSLOCG00000012680	-	98	32.456	Lepisosteus_oculatus
ENSXETG00000033143	-	54	33.544	ENSLOCG00000017302	-	88	33.544	Lepisosteus_oculatus
ENSXETG00000033143	-	91	37.975	ENSLOCG00000000602	-	78	37.975	Lepisosteus_oculatus
ENSXETG00000033143	-	54	33.766	ENSLOCG00000017328	-	90	33.766	Lepisosteus_oculatus
ENSXETG00000033143	-	88	30.435	ENSLOCG00000000297	-	93	30.435	Lepisosteus_oculatus
ENSXETG00000033143	-	57	32.515	ENSLOCG00000002624	-	92	32.515	Lepisosteus_oculatus
ENSXETG00000033143	-	89	38.095	ENSLOCG00000017639	-	93	38.095	Lepisosteus_oculatus
ENSXETG00000033143	-	87	31.200	ENSLOCG00000000632	-	94	31.200	Lepisosteus_oculatus
ENSXETG00000033143	-	94	35.714	ENSLOCG00000017670	-	93	35.714	Lepisosteus_oculatus
ENSXETG00000033143	-	53	33.553	ENSLOCG00000018355	-	89	33.553	Lepisosteus_oculatus
ENSXETG00000033143	-	92	33.533	ENSLOCG00000017974	-	86	33.019	Lepisosteus_oculatus
ENSXETG00000033143	-	61	31.792	ENSLOCG00000017303	-	89	31.792	Lepisosteus_oculatus
ENSXETG00000033143	-	56	31.250	ENSLOCG00000017694	-	92	31.250	Lepisosteus_oculatus
ENSXETG00000033143	-	99	32.061	ENSLOCG00000000320	-	98	32.061	Lepisosteus_oculatus
ENSXETG00000033143	-	91	32.759	ENSLOCG00000000361	-	96	32.759	Lepisosteus_oculatus
ENSXETG00000033143	-	72	35.115	ENSLOCG00000017824	-	91	35.115	Lepisosteus_oculatus
ENSXETG00000033143	-	92	34.783	ENSLOCG00000008338	-	86	34.783	Lepisosteus_oculatus
ENSXETG00000033143	-	82	36.082	ENSLOCG00000017501	-	85	36.082	Lepisosteus_oculatus
ENSXETG00000033143	-	58	30.909	ENSLOCG00000017503	-	89	30.909	Lepisosteus_oculatus
ENSXETG00000033143	-	51	36.986	ENSLOCG00000017623	-	59	36.986	Lepisosteus_oculatus
ENSXETG00000033143	-	83	43.709	ENSLAFG00000030593	ZCCHC3	56	43.709	Loxodonta_africana
ENSXETG00000033143	-	72	39.189	ENSMZEG00005028547	-	92	39.189	Maylandia_zebra
ENSXETG00000033143	-	91	38.462	ENSMZEG00005028553	-	82	38.462	Maylandia_zebra
ENSXETG00000033143	-	82	47.297	ENSMZEG00005025873	-	75	46.875	Maylandia_zebra
ENSXETG00000033143	-	91	38.462	ENSMZEG00005028130	-	80	38.462	Maylandia_zebra
ENSXETG00000033143	-	85	33.333	ENSNBRG00000024092	-	74	33.333	Neolamprologus_brichardi
ENSXETG00000033143	-	77	36.429	ENSNBRG00000022137	-	74	34.641	Neolamprologus_brichardi
ENSXETG00000033143	-	83	43.709	ENSOARG00000019161	ZCCHC3	52	43.709	Ovis_aries
ENSXETG00000033143	-	83	43.709	ENSPPAG00000010453	-	57	43.709	Pan_paniscus
ENSXETG00000033143	-	74	45.312	ENSPTIG00000009393	ZCCHC3	57	45.312	Panthera_tigris_altaica
ENSXETG00000033143	-	50	35.915	ENSPNYG00000015964	-	75	35.915	Pundamilia_nyererei
ENSXETG00000033143	-	83	33.735	ENSPNYG00000002656	-	83	34.014	Pundamilia_nyererei
ENSXETG00000033143	-	50	34.028	ENSPNAG00000010555	-	79	34.028	Pygocentrus_nattereri
ENSXETG00000033143	-	83	43.046	ENSVPAG00000011267	-	61	43.046	Vicugna_pacos