EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000033541 (Gene tree)
Gene ID: -
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 10785 bases
Position: chrGL172674.1:3602384-3613168
Accession: 100038118
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000061126	RRM_1	PF00076.22	7.9e-29	1	2
ENSXETP00000061126	RRM_1	PF00076.22	7.9e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000062531	RBM12-201	3624	XM_012952645	ENSXETP00000061126	880 (aa)	XP_012808099	F6U052

Gene Model

Click here to download ENSXETG00000033541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000033541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000033541	RBM12	57	50.000	ENSXETG00000014696	rbm12b	80	50.000
ENSXETG00000033541	RBM12	91	46.914	ENSXETG00000014694	rbm12b	99	67.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000033541	RBM12	74	65.919	ENSG00000244462	RBM12	100	84.173	Homo_sapiens
ENSXETG00000033541	RBM12	100	60.485	ENSAMEG00000019189	RBM12	100	61.105	Ailuropoda_melanoleuca
ENSXETG00000033541	RBM12	100	43.210	ENSACIG00000011053	rbm12	100	45.329	Amphilophus_citrinellus
ENSXETG00000033541	RBM12	100	44.674	ENSAOCG00000019579	rbm12	100	45.745	Amphiprion_ocellaris
ENSXETG00000033541	RBM12	72	59.754	ENSACAG00000006330	RBM12	98	62.778	Anolis_carolinensis
ENSXETG00000033541	RBM12	74	65.620	ENSANAG00000032596	RBM12	98	60.296	Aotus_nancymaae
ENSXETG00000033541	RBM12	77	65.029	ENSBTAG00000044015	RBM12	95	64.306	Bos_taurus
ENSXETG00000033541	RBM12	99	63.152	ENSCAFG00000008256	RBM12	98	63.606	Canis_familiaris
ENSXETG00000033541	RBM12	100	60.911	ENSCAFG00020005650	RBM12	100	61.538	Canis_lupus_dingo
ENSXETG00000033541	RBM12	100	59.937	ENSCHIG00000024592	RBM12	100	60.809	Capra_hircus
ENSXETG00000033541	RBM12	83	62.370	ENSTSYG00000030563	RBM12	98	62.309	Carlito_syrichta
ENSXETG00000033541	RBM12	71	62.740	ENSCPOG00000035170	RBM12	88	65.204	Cavia_porcellus
ENSXETG00000033541	RBM12	72	44.410	ENSCCAG00000035899	-	100	50.442	Cebus_capucinus
ENSXETG00000033541	RBM12	72	55.988	ENSCCAG00000036056	-	98	57.714	Cebus_capucinus
ENSXETG00000033541	RBM12	74	65.471	ENSCATG00000030934	RBM12	98	60.127	Cercocebus_atys
ENSXETG00000033541	RBM12	56	82.759	ENSCLAG00000017230	RBM12	100	59.936	Chinchilla_lanigera
ENSXETG00000033541	RBM12	74	67.171	ENSCANG00000030552	RBM12	98	60.127	Colobus_angolensis_palliatus
ENSXETG00000033541	RBM12	72	62.768	ENSCGRG00001021144	Rbm12	88	65.356	Cricetulus_griseus_chok1gshd
ENSXETG00000033541	RBM12	72	62.768	ENSCGRG00000012719	Rbm12	88	65.356	Cricetulus_griseus_crigri
ENSXETG00000033541	RBM12	100	49.030	ENSDARG00000100636	rbm12	100	49.626	Danio_rerio
ENSXETG00000033541	RBM12	71	62.740	ENSDORG00000028509	-	100	59.220	Dipodomys_ordii
ENSXETG00000033541	RBM12	57	85.106	ENSEBUG00000016806	rbm12	99	85.106	Eptatretus_burgeri
ENSXETG00000033541	RBM12	72	55.932	ENSECAG00000021997	RBM12	100	60.677	Equus_caballus
ENSXETG00000033541	RBM12	100	58.718	ENSFALG00000012516	RBM12	100	61.272	Ficedula_albicollis
ENSXETG00000033541	RBM12	100	59.769	ENSFDAG00000014663	RBM12	100	59.428	Fukomys_damarensis
ENSXETG00000033541	RBM12	70	59.459	ENSGALG00000030253	RBM12	100	62.088	Gallus_gallus
ENSXETG00000033541	RBM12	74	65.620	ENSGGOG00000028500	RBM12	98	60.232	Gorilla_gorilla
ENSXETG00000033541	RBM12	81	59.487	ENSHGLG00000013208	RBM12	100	59.619	Heterocephalus_glaber_female
ENSXETG00000033541	RBM12	83	82.759	ENSHGLG00100019158	RBM12	90	65.084	Heterocephalus_glaber_male
ENSXETG00000033541	RBM12	100	49.147	ENSIPUG00000014491	rbm12	100	48.778	Ictalurus_punctatus
ENSXETG00000033541	RBM12	71	54.936	ENSJJAG00000009879	-	100	50.539	Jaculus_jaculus
ENSXETG00000033541	RBM12	70	51.101	ENSLOCG00000018363	rbm12	100	53.450	Lepisosteus_oculatus
ENSXETG00000033541	RBM12	55	54.380	ENSLAFG00000010341	RBM12	100	60.254	Loxodonta_africana
ENSXETG00000033541	RBM12	74	65.620	ENSMFAG00000032583	RBM12	98	60.232	Macaca_fascicularis
ENSXETG00000033541	RBM12	74	65.620	ENSMMUG00000020960	CPNE1	100	60.786	Macaca_mulatta
ENSXETG00000033541	RBM12	74	65.620	ENSMNEG00000045365	RBM12	98	60.232	Macaca_nemestrina
ENSXETG00000033541	RBM12	74	65.620	ENSMLEG00000032492	RBM12	98	60.232	Mandrillus_leucophaeus
ENSXETG00000033541	RBM12	55	86.916	ENSMAMG00000001497	rbm12	85	86.916	Mastacembelus_armatus
ENSXETG00000033541	RBM12	70	57.032	ENSMGAG00000001502	RBM12	100	63.224	Meleagris_gallopavo
ENSXETG00000033541	RBM12	72	63.007	ENSMAUG00000012800	Rbm12	88	65.961	Mesocricetus_auratus
ENSXETG00000033541	RBM12	73	52.882	ENSMICG00000029540	-	100	55.460	Microcebus_murinus
ENSXETG00000033541	RBM12	72	59.238	ENSMICG00000032761	-	98	62.136	Microcebus_murinus
ENSXETG00000033541	RBM12	71	63.309	ENSMOCG00000012950	Rbm12	88	65.809	Microtus_ochrogaster
ENSXETG00000033541	RBM12	100	46.121	ENSMMOG00000013495	rbm12	100	45.806	Mola_mola
ENSXETG00000033541	RBM12	70	59.213	ENSMODG00000001591	RBM12	98	63.434	Monodelphis_domestica
ENSXETG00000033541	RBM12	72	62.291	MGP_CAROLIEiJ_G0024551	Rbm12	89	63.716	Mus_caroli
ENSXETG00000033541	RBM12	72	62.291	ENSMUSG00000089824	Rbm12	91	63.425	Mus_musculus
ENSXETG00000033541	RBM12	72	62.768	MGP_PahariEiJ_G0025996	Rbm12	88	63.861	Mus_pahari
ENSXETG00000033541	RBM12	72	62.530	MGP_SPRETEiJ_G0025473	Rbm12	90	63.716	Mus_spretus
ENSXETG00000033541	RBM12	72	57.040	ENSMPUG00000017789	-	100	60.680	Mustela_putorius_furo
ENSXETG00000033541	RBM12	72	55.680	ENSMLUG00000011217	RBM12	98	60.677	Myotis_lucifugus
ENSXETG00000033541	RBM12	72	63.962	ENSNGAG00000015846	Rbm12	88	66.717	Nannospalax_galili
ENSXETG00000033541	RBM12	78	60.795	ENSNLEG00000010268	RBM12	98	60.443	Nomascus_leucogenys
ENSXETG00000033541	RBM12	70	59.177	ENSMEUG00000007621	RBM12	100	63.099	Notamacropus_eugenii
ENSXETG00000033541	RBM12	72	55.119	ENSOPRG00000005687	RBM12	100	58.682	Ochotona_princeps
ENSXETG00000033541	RBM12	56	82.759	ENSODEG00000013870	RBM12	90	65.507	Octodon_degus
ENSXETG00000033541	RBM12	73	46.177	ENSOMEG00000008238	rbm12	100	43.710	Oryzias_melastigma
ENSXETG00000033541	RBM12	74	65.919	ENSPPAG00000040719	RBM12	98	60.443	Pan_paniscus
ENSXETG00000033541	RBM12	74	65.919	ENSPTRG00000040708	-	98	60.443	Pan_troglodytes
ENSXETG00000033541	RBM12	74	65.919	ENSPTRG00000013446	RBM12	98	60.443	Pan_troglodytes
ENSXETG00000033541	RBM12	74	65.620	ENSPANG00000020003	CPNE1	98	60.232	Papio_anubis
ENSXETG00000033541	RBM12	70	57.624	ENSPSIG00000007369	RBM12	98	60.154	Pelodiscus_sinensis
ENSXETG00000033541	RBM12	51	94.565	ENSPMGG00000018816	rbm12	96	94.565	Periophthalmus_magnuspinnatus
ENSXETG00000033541	RBM12	72	62.768	ENSPEMG00000017769	Rbm12	87	65.809	Peromyscus_maniculatus_bairdii
ENSXETG00000033541	RBM12	67	74.684	ENSPFOG00000023551	rbm12	89	63.473	Poecilia_formosa
ENSXETG00000033541	RBM12	74	65.770	ENSPPYG00000010960	RBM12	100	60.211	Pongo_abelii
ENSXETG00000033541	RBM12	100	58.254	ENSPCAG00000008653	RBM12	100	59.831	Procavia_capensis
ENSXETG00000033541	RBM12	100	60.778	ENSPCOG00000023724	RBM12	98	61.253	Propithecus_coquereli
ENSXETG00000033541	RBM12	53	55.977	ENSPVAG00000014937	RBM12	100	60.359	Pteropus_vampyrus
ENSXETG00000033541	RBM12	72	62.291	ENSRNOG00000019723	Rbm12	86	63.570	Rattus_norvegicus
ENSXETG00000033541	RBM12	72	62.291	ENSRNOG00000049913	LOC100910990	86	63.570	Rattus_norvegicus
ENSXETG00000033541	RBM12	74	65.620	ENSRBIG00000042965	RBM12	98	60.232	Rhinopithecus_bieti
ENSXETG00000033541	RBM12	74	65.620	ENSRROG00000037485	RBM12	98	60.232	Rhinopithecus_roxellana
ENSXETG00000033541	RBM12	81	59.974	ENSSBOG00000027633	RBM12	98	60.423	Saimiri_boliviensis_boliviensis
ENSXETG00000033541	RBM12	70	60.787	ENSSHAG00000018585	RBM12	100	63.545	Sarcophilus_harrisii
ENSXETG00000033541	RBM12	72	56.657	ENSSSCG00000036156	RBM12	100	60.252	Sus_scrofa
ENSXETG00000033541	RBM12	70	59.746	ENSTGUG00000003002	RBM12	100	63.830	Taeniopygia_guttata
ENSXETG00000033541	RBM12	72	57.347	ENSTTRG00000017035	RBM12	100	60.782	Tursiops_truncatus
ENSXETG00000033541	RBM12	72	57.082	ENSUAMG00000010430	RBM12	100	60.805	Ursus_americanus
ENSXETG00000033541	RBM12	89	89.286	ENSVPAG00000003812	RBM12	90	89.286	Vicugna_pacos