EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000033791 (Gene tree)
Gene ID: -
Gene Symbol: SMG5
Alias: EST1B|KIAA1089|LPTS-RP1|LPTSRP1|RP11-54H19.7|SMG-5
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 9502 bases
Position: chrGL173671.1:167021-176522
Accession: 24644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000058378	EST1_DNA_bind	PF10373.9	4.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064309	SMG5-201	2373	-	ENSXETP00000058378	791 (aa)	-	F7C739

Gene Model

Click here to download ENSXETG00000033791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000033791's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000033791	SMG5	99	65.195	ENSG00000198952	SMG5	77	65.952	Homo_sapiens
ENSXETG00000033791	SMG5	95	59.103	ENSAPOG00000019690	smg5	76	57.576	Acanthochromis_polyacanthus
ENSXETG00000033791	SMG5	99	63.304	ENSAMEG00000014458	SMG5	78	63.808	Ailuropoda_melanoleuca
ENSXETG00000033791	SMG5	99	56.181	ENSACIG00000001353	smg5	77	58.959	Amphilophus_citrinellus
ENSXETG00000033791	SMG5	99	57.054	ENSAOCG00000019483	smg5	79	53.675	Amphiprion_ocellaris
ENSXETG00000033791	SMG5	95	58.648	ENSAPEG00000022949	smg5	76	57.302	Amphiprion_percula
ENSXETG00000033791	SMG5	99	56.646	ENSATEG00000005348	smg5	77	58.570	Anabas_testudineus
ENSXETG00000033791	SMG5	99	69.400	ENSAPLG00000010263	SMG5	79	69.400	Anas_platyrhynchos
ENSXETG00000033791	SMG5	59	67.442	ENSACAG00000009162	-	97	67.442	Anolis_carolinensis
ENSXETG00000033791	SMG5	99	65.448	ENSANAG00000032899	SMG5	77	66.204	Aotus_nancymaae
ENSXETG00000033791	SMG5	99	58.313	ENSACLG00000009311	smg5	76	58.924	Astatotilapia_calliptera
ENSXETG00000033791	SMG5	99	54.095	ENSAMXG00000024616	smg5	79	56.171	Astyanax_mexicanus
ENSXETG00000033791	SMG5	99	65.069	ENSBTAG00000009435	SMG5	77	65.574	Bos_taurus
ENSXETG00000033791	SMG5	99	36.625	ENSBTAG00000021747	-	75	36.294	Bos_taurus
ENSXETG00000033791	SMG5	99	65.448	ENSCJAG00000005684	SMG5	77	66.204	Callithrix_jacchus
ENSXETG00000033791	SMG5	99	64.187	ENSCAFG00000016839	SMG5	76	64.817	Canis_familiaris
ENSXETG00000033791	SMG5	99	64.187	ENSCAFG00020006061	SMG5	76	64.817	Canis_lupus_dingo
ENSXETG00000033791	SMG5	99	37.150	ENSCHIG00000006323	-	76	36.755	Capra_hircus
ENSXETG00000033791	SMG5	99	65.322	ENSCHIG00000007709	SMG5	77	65.826	Capra_hircus
ENSXETG00000033791	SMG5	99	65.491	ENSTSYG00000004099	SMG5	77	65.869	Carlito_syrichta
ENSXETG00000033791	SMG5	99	54.798	ENSCAPG00000003631	SMG5	84	54.750	Cavia_aperea
ENSXETG00000033791	SMG5	99	65.278	ENSCPOG00000015696	SMG5	77	65.000	Cavia_porcellus
ENSXETG00000033791	SMG5	99	65.574	ENSCCAG00000027409	SMG5	77	66.330	Cebus_capucinus
ENSXETG00000033791	SMG5	99	65.195	ENSCATG00000030539	SMG5	77	65.952	Cercocebus_atys
ENSXETG00000033791	SMG5	99	64.573	ENSCLAG00000003983	SMG5	77	64.625	Chinchilla_lanigera
ENSXETG00000033791	SMG5	99	65.195	ENSCSAG00000002120	SMG5	77	65.952	Chlorocebus_sabaeus
ENSXETG00000033791	SMG5	99	67.927	ENSCPBG00000025848	SMG5	83	68.902	Chrysemys_picta_bellii
ENSXETG00000033791	SMG5	99	61.713	ENSCANG00000029208	SMG5	76	62.343	Colobus_angolensis_palliatus
ENSXETG00000033791	SMG5	99	64.654	ENSCGRG00001006336	Smg5	77	65.031	Cricetulus_griseus_chok1gshd
ENSXETG00000033791	SMG5	99	64.654	ENSCGRG00000005111	Smg5	79	65.031	Cricetulus_griseus_crigri
ENSXETG00000033791	SMG5	99	55.709	ENSCSEG00000014220	smg5	79	54.545	Cynoglossus_semilaevis
ENSXETG00000033791	SMG5	99	55.514	ENSCVAG00000000529	smg5	78	55.762	Cyprinodon_variegatus
ENSXETG00000033791	SMG5	99	55.619	ENSDARG00000041481	smg5	79	56.621	Danio_rerio
ENSXETG00000033791	SMG5	99	61.947	ENSDNOG00000000051	SMG5	77	61.713	Dasypus_novemcinctus
ENSXETG00000033791	SMG5	95	30.647	ENSDNOG00000039862	-	78	30.383	Dasypus_novemcinctus
ENSXETG00000033791	SMG5	99	65.578	ENSDORG00000010382	Smg5	77	64.875	Dipodomys_ordii
ENSXETG00000033791	SMG5	75	91.579	ENSETEG00000010336	SMG5	64	91.579	Echinops_telfairi
ENSXETG00000033791	SMG5	99	65.491	ENSEASG00005019122	SMG5	77	66.121	Equus_asinus_asinus
ENSXETG00000033791	SMG5	99	65.491	ENSECAG00000001389	SMG5	79	66.121	Equus_caballus
ENSXETG00000033791	SMG5	66	82.482	ENSEEUG00000012690	SMG5	53	82.482	Erinaceus_europaeus
ENSXETG00000033791	SMG5	99	56.597	ENSELUG00000012585	smg5	81	53.950	Esox_lucius
ENSXETG00000033791	SMG5	99	64.565	ENSFCAG00000011783	SMG5	76	65.195	Felis_catus
ENSXETG00000033791	SMG5	99	65.075	ENSFDAG00000017388	SMG5	79	64.956	Fukomys_damarensis
ENSXETG00000033791	SMG5	99	53.242	ENSFHEG00000013939	smg5	78	53.491	Fundulus_heteroclitus
ENSXETG00000033791	SMG5	99	51.659	ENSGMOG00000007310	smg5	79	54.860	Gadus_morhua
ENSXETG00000033791	SMG5	99	67.931	ENSGALG00000029918	-	79	67.931	Gallus_gallus
ENSXETG00000033791	SMG5	51	65.127	ENSGALG00000049544	-	88	64.908	Gallus_gallus
ENSXETG00000033791	SMG5	87	60.968	ENSGAFG00000021691	smg5	75	60.968	Gambusia_affinis
ENSXETG00000033791	SMG5	95	55.976	ENSGACG00000013142	smg5	79	54.214	Gasterosteus_aculeatus
ENSXETG00000033791	SMG5	99	68.293	ENSGAGG00000016131	SMG5	77	68.659	Gopherus_agassizii
ENSXETG00000033791	SMG5	99	65.195	ENSGGOG00000010932	SMG5	77	65.952	Gorilla_gorilla
ENSXETG00000033791	SMG5	95	59.645	ENSHBUG00000008654	smg5	77	58.465	Haplochromis_burtoni
ENSXETG00000033791	SMG5	99	64.654	ENSHGLG00000019152	SMG5	77	64.950	Heterocephalus_glaber_female
ENSXETG00000033791	SMG5	86	67.394	ENSHGLG00100015948	SMG5	74	67.733	Heterocephalus_glaber_male
ENSXETG00000033791	SMG5	86	67.033	ENSHCOG00000010229	smg5	70	66.484	Hippocampus_comes
ENSXETG00000033791	SMG5	99	54.335	ENSIPUG00000006624	Smg5	79	55.415	Ictalurus_punctatus
ENSXETG00000033791	SMG5	99	65.322	ENSSTOG00000001780	SMG5	77	65.826	Ictidomys_tridecemlineatus
ENSXETG00000033791	SMG5	99	64.232	ENSJJAG00000022763	Smg5	77	64.484	Jaculus_jaculus
ENSXETG00000033791	SMG5	99	52.392	ENSKMAG00000014586	smg5	79	53.683	Kryptolebias_marmoratus
ENSXETG00000033791	SMG5	99	56.304	ENSLBEG00000002145	smg5	76	57.753	Labrus_bergylta
ENSXETG00000033791	SMG5	99	58.017	ENSLACG00000010521	SMG5	77	59.119	Latimeria_chalumnae
ENSXETG00000033791	SMG5	96	51.300	ENSLOCG00000008380	smg5	78	51.149	Lepisosteus_oculatus
ENSXETG00000033791	SMG5	99	65.826	ENSLAFG00000006241	SMG5	77	65.826	Loxodonta_africana
ENSXETG00000033791	SMG5	99	65.195	ENSMFAG00000045357	SMG5	77	65.952	Macaca_fascicularis
ENSXETG00000033791	SMG5	99	65.195	ENSMMUG00000000090	SMG5	77	65.952	Macaca_mulatta
ENSXETG00000033791	SMG5	99	65.069	ENSMNEG00000044425	SMG5	77	65.826	Macaca_nemestrina
ENSXETG00000033791	SMG5	99	63.237	ENSMLEG00000041192	SMG5	79	63.990	Mandrillus_leucophaeus
ENSXETG00000033791	SMG5	99	52.908	ENSMAMG00000010683	smg5	84	53.803	Mastacembelus_armatus
ENSXETG00000033791	SMG5	81	56.761	ENSMZEG00005016543	smg5	99	57.949	Maylandia_zebra
ENSXETG00000033791	SMG5	95	57.306	ENSMZEG00005015815	smg5	73	58.577	Maylandia_zebra
ENSXETG00000033791	SMG5	99	64.277	ENSMAUG00000010381	Smg5	77	64.528	Mesocricetus_auratus
ENSXETG00000033791	SMG5	99	64.943	ENSMICG00000002257	SMG5	77	65.700	Microcebus_murinus
ENSXETG00000033791	SMG5	99	64.080	ENSMOCG00000016590	Smg5	77	64.025	Microtus_ochrogaster
ENSXETG00000033791	SMG5	99	52.381	ENSMMOG00000017199	smg5	79	52.834	Mola_mola
ENSXETG00000033791	SMG5	69	34.444	ENSMODG00000004735	-	61	33.512	Monodelphis_domestica
ENSXETG00000033791	SMG5	83	67.064	ENSMODG00000016901	SMG5	72	68.675	Monodelphis_domestica
ENSXETG00000033791	SMG5	69	33.333	ENSMODG00000010675	-	61	33.333	Monodelphis_domestica
ENSXETG00000033791	SMG5	72	36.810	ENSMODG00000004532	-	59	34.783	Monodelphis_domestica
ENSXETG00000033791	SMG5	99	52.009	ENSMALG00000010375	smg5	79	52.573	Monopterus_albus
ENSXETG00000033791	SMG5	99	64.403	MGP_CAROLIEiJ_G0025163	Smg5	77	64.780	Mus_caroli
ENSXETG00000033791	SMG5	99	64.151	ENSMUSG00000001415	Smg5	77	64.528	Mus_musculus
ENSXETG00000033791	SMG5	99	64.403	MGP_PahariEiJ_G0026606	Smg5	77	64.780	Mus_pahari
ENSXETG00000033791	SMG5	99	64.277	MGP_SPRETEiJ_G0026104	Smg5	77	64.528	Mus_spretus
ENSXETG00000033791	SMG5	99	64.565	ENSMPUG00000004546	SMG5	82	65.322	Mustela_putorius_furo
ENSXETG00000033791	SMG5	99	64.277	ENSMLUG00000008518	SMG5	77	64.000	Myotis_lucifugus
ENSXETG00000033791	SMG5	58	36.876	ENSNGAG00000012101	-	76	36.421	Nannospalax_galili
ENSXETG00000033791	SMG5	99	64.484	ENSNGAG00000020706	Smg5	77	64.861	Nannospalax_galili
ENSXETG00000033791	SMG5	97	54.476	ENSNBRG00000004332	smg5	74	57.614	Neolamprologus_brichardi
ENSXETG00000033791	SMG5	99	65.069	ENSNLEG00000012439	SMG5	77	65.826	Nomascus_leucogenys
ENSXETG00000033791	SMG5	99	64.736	ENSMEUG00000012834	SMG5	77	65.365	Notamacropus_eugenii
ENSXETG00000033791	SMG5	99	64.943	ENSOPRG00000009152	SMG5	77	65.322	Ochotona_princeps
ENSXETG00000033791	SMG5	99	65.404	ENSODEG00000012237	SMG5	77	65.909	Octodon_degus
ENSXETG00000033791	SMG5	99	53.786	ENSONIG00000008632	smg5	79	55.457	Oreochromis_niloticus
ENSXETG00000033791	SMG5	99	64.817	ENSOCUG00000012886	SMG5	78	65.448	Oryctolagus_cuniculus
ENSXETG00000033791	SMG5	88	35.294	ENSOCUG00000023338	-	73	34.864	Oryctolagus_cuniculus
ENSXETG00000033791	SMG5	97	53.551	ENSORLG00000016239	smg5	79	54.525	Oryzias_latipes
ENSXETG00000033791	SMG5	95	57.368	ENSORLG00020013127	smg5	79	54.360	Oryzias_latipes_hni
ENSXETG00000033791	SMG5	95	57.386	ENSORLG00015019014	smg5	79	54.237	Oryzias_latipes_hsok
ENSXETG00000033791	SMG5	77	51.502	ENSOMEG00000021330	smg5	69	52.624	Oryzias_melastigma
ENSXETG00000033791	SMG5	99	64.439	ENSOGAG00000004966	SMG5	77	64.943	Otolemur_garnettii
ENSXETG00000033791	SMG5	99	65.195	ENSOARG00000005778	SMG5	77	65.700	Ovis_aries
ENSXETG00000033791	SMG5	99	37.056	ENSOARG00000011963	-	76	36.802	Ovis_aries
ENSXETG00000033791	SMG5	99	64.943	ENSPPAG00000011996	SMG5	77	65.700	Pan_paniscus
ENSXETG00000033791	SMG5	99	63.510	ENSPPRG00000011901	SMG5	78	65.195	Panthera_pardus
ENSXETG00000033791	SMG5	97	61.118	ENSPTIG00000007892	SMG5	75	62.973	Panthera_tigris_altaica
ENSXETG00000033791	SMG5	99	64.943	ENSPTRG00000023925	SMG5	77	65.700	Pan_troglodytes
ENSXETG00000033791	SMG5	99	64.943	ENSPTRG00000049282	-	77	65.700	Pan_troglodytes
ENSXETG00000033791	SMG5	99	65.195	ENSPANG00000011201	SMG5	77	65.952	Papio_anubis
ENSXETG00000033791	SMG5	99	55.504	ENSPKIG00000009402	smg5	78	55.972	Paramormyrops_kingsleyae
ENSXETG00000033791	SMG5	99	70.750	ENSPSIG00000015198	SMG5	79	70.750	Pelodiscus_sinensis
ENSXETG00000033791	SMG5	100	51.047	ENSPMGG00000010465	smg5	78	51.054	Periophthalmus_magnuspinnatus
ENSXETG00000033791	SMG5	99	64.403	ENSPEMG00000001819	Smg5	77	64.780	Peromyscus_maniculatus_bairdii
ENSXETG00000033791	SMG5	99	42.457	ENSPMAG00000000410	smg5	77	44.164	Petromyzon_marinus
ENSXETG00000033791	SMG5	99	65.365	ENSPCIG00000018938	SMG5	77	66.121	Phascolarctos_cinereus
ENSXETG00000033791	SMG5	99	51.242	ENSPLAG00000009332	smg5	79	52.252	Poecilia_latipinna
ENSXETG00000033791	SMG5	99	55.569	ENSPMEG00000014105	smg5	77	56.410	Poecilia_mexicana
ENSXETG00000033791	SMG5	99	51.354	ENSPREG00000017713	smg5	79	52.643	Poecilia_reticulata
ENSXETG00000033791	SMG5	99	65.195	ENSPPYG00000000723	SMG5	77	65.952	Pongo_abelii
ENSXETG00000033791	SMG5	68	75.676	ENSPCAG00000008412	SMG5	56	75.676	Procavia_capensis
ENSXETG00000033791	SMG5	99	65.826	ENSPCOG00000004741	SMG5	78	66.583	Propithecus_coquereli
ENSXETG00000033791	SMG5	99	64.313	ENSPVAG00000016748	SMG5	76	64.937	Pteropus_vampyrus
ENSXETG00000033791	SMG5	95	54.639	ENSPNYG00000013397	smg5	82	54.586	Pundamilia_nyererei
ENSXETG00000033791	SMG5	99	54.913	ENSPNAG00000028363	smg5	79	55.760	Pygocentrus_nattereri
ENSXETG00000033791	SMG5	99	64.528	ENSRNOG00000019590	Smg5	77	64.906	Rattus_norvegicus
ENSXETG00000033791	SMG5	99	64.943	ENSRBIG00000027428	SMG5	77	65.700	Rhinopithecus_bieti
ENSXETG00000033791	SMG5	99	64.817	ENSRROG00000030035	SMG5	77	65.574	Rhinopithecus_roxellana
ENSXETG00000033791	SMG5	99	65.574	ENSSBOG00000033339	SMG5	77	66.330	Saimiri_boliviensis_boliviensis
ENSXETG00000033791	SMG5	72	34.078	ENSSHAG00000000561	-	64	32.402	Sarcophilus_harrisii
ENSXETG00000033791	SMG5	99	64.560	ENSSHAG00000014163	SMG5	79	65.875	Sarcophilus_harrisii
ENSXETG00000033791	SMG5	99	57.463	ENSSFOG00015024175	smg5	79	54.795	Scleropages_formosus
ENSXETG00000033791	SMG5	99	52.744	ENSSMAG00000013059	smg5	81	54.709	Scophthalmus_maximus
ENSXETG00000033791	SMG5	95	53.218	ENSSDUG00000007122	smg5	79	54.707	Seriola_dumerili
ENSXETG00000033791	SMG5	97	58.281	ENSSLDG00000011418	smg5	77	59.849	Seriola_lalandi_dorsalis
ENSXETG00000033791	SMG5	86	61.437	ENSSARG00000012484	SMG5	73	61.877	Sorex_araneus
ENSXETG00000033791	SMG5	99	68.370	ENSSPUG00000002260	SMG5	83	68.248	Sphenodon_punctatus
ENSXETG00000033791	SMG5	95	57.452	ENSSPAG00000014266	smg5	76	57.683	Stegastes_partitus
ENSXETG00000033791	SMG5	99	51.461	ENSSSCG00000039308	-	77	52.598	Sus_scrofa
ENSXETG00000033791	SMG5	99	65.574	ENSSSCG00000006490	-	82	66.204	Sus_scrofa
ENSXETG00000033791	SMG5	99	69.521	ENSTGUG00000003748	-	76	69.899	Taeniopygia_guttata
ENSXETG00000033791	SMG5	99	54.969	ENSTRUG00000012580	smg5	77	56.740	Takifugu_rubripes
ENSXETG00000033791	SMG5	100	56.398	ENSTNIG00000010303	smg5	77	57.602	Tetraodon_nigroviridis
ENSXETG00000033791	SMG5	99	63.556	ENSTTRG00000001401	SMG5	77	64.061	Tursiops_truncatus
ENSXETG00000033791	SMG5	99	63.131	ENSUAMG00000013721	SMG5	76	64.565	Ursus_americanus
ENSXETG00000033791	SMG5	99	61.034	ENSUMAG00000018041	SMG5	77	61.412	Ursus_maritimus
ENSXETG00000033791	SMG5	92	65.517	ENSVPAG00000009446	SMG5	78	60.908	Vicugna_pacos
ENSXETG00000033791	SMG5	99	64.817	ENSVVUG00000005887	SMG5	76	64.817	Vulpes_vulpes
ENSXETG00000033791	SMG5	70	59.563	ENSXCOG00000004379	smg5	71	59.563	Xiphophorus_couchianus
ENSXETG00000033791	SMG5	99	54.926	ENSXMAG00000013499	smg5	77	55.718	Xiphophorus_maculatus