EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000033863 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 10692 bases
Position: chrGL173285.1:517302-527993
Accession: 779562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060781	TRM	PF02005.16	1.8e-143	1	1
ENSXETP00000060781	Met_10	PF02475.16	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000062568	TRMT1-201	2125	XM_004919144	ENSXETP00000060781	500 (aa)	XP_004919201	F6XJY2

Gene Model

Click here to download ENSXETG00000033863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000033863's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000033863	TRMT1	92	71.800	ENSG00000104907	TRMT1	99	74.737	Homo_sapiens
ENSXETG00000033863	TRMT1	92	71.584	ENSAMEG00000012598	TRMT1	69	71.584	Ailuropoda_melanoleuca
ENSXETG00000033863	TRMT1	92	60.304	ENSACIG00000018680	trmt1	70	60.304	Amphilophus_citrinellus
ENSXETG00000033863	TRMT1	92	69.130	ENSAOCG00000006781	trmt1	69	69.130	Amphiprion_ocellaris
ENSXETG00000033863	TRMT1	92	69.130	ENSAPEG00000007712	trmt1	69	69.130	Amphiprion_percula
ENSXETG00000033863	TRMT1	92	71.087	ENSATEG00000001872	trmt1	68	71.087	Anabas_testudineus
ENSXETG00000033863	TRMT1	92	72.138	ENSACAG00000003825	TRMT1	75	72.138	Anolis_carolinensis
ENSXETG00000033863	TRMT1	92	69.414	ENSANAG00000023016	TRMT1	74	69.414	Aotus_nancymaae
ENSXETG00000033863	TRMT1	90	70.982	ENSACLG00000010073	trmt1	74	70.982	Astatotilapia_calliptera
ENSXETG00000033863	TRMT1	92	67.167	ENSAMXG00000012026	trmt1	70	67.167	Astyanax_mexicanus
ENSXETG00000033863	TRMT1	92	72.017	ENSBTAG00000019325	TRMT1	66	72.017	Bos_taurus
ENSXETG00000033863	TRMT1	91	43.103	WBGene00006613	trm-1	82	43.103	Caenorhabditis_elegans
ENSXETG00000033863	TRMT1	92	69.414	ENSCJAG00000004566	TRMT1	71	69.414	Callithrix_jacchus
ENSXETG00000033863	TRMT1	92	71.800	ENSCAFG00000017070	TRMT1	72	71.800	Canis_familiaris
ENSXETG00000033863	TRMT1	92	70.870	ENSCAFG00020005397	TRMT1	71	70.870	Canis_lupus_dingo
ENSXETG00000033863	TRMT1	92	72.078	ENSCHIG00000013569	TRMT1	70	72.078	Capra_hircus
ENSXETG00000033863	TRMT1	92	71.739	ENSTSYG00000003207	TRMT1	71	71.739	Carlito_syrichta
ENSXETG00000033863	TRMT1	84	69.811	ENSCAPG00000003355	TRMT1	78	69.811	Cavia_aperea
ENSXETG00000033863	TRMT1	92	70.499	ENSCPOG00000011754	TRMT1	70	70.499	Cavia_porcellus
ENSXETG00000033863	TRMT1	92	68.980	ENSCCAG00000022263	TRMT1	74	68.980	Cebus_capucinus
ENSXETG00000033863	TRMT1	92	72.668	ENSCATG00000039850	TRMT1	70	72.668	Cercocebus_atys
ENSXETG00000033863	TRMT1	96	55.301	ENSCATG00000038220	-	86	55.301	Cercocebus_atys
ENSXETG00000033863	TRMT1	92	71.121	ENSCLAG00000015295	TRMT1	73	68.683	Chinchilla_lanigera
ENSXETG00000033863	TRMT1	92	72.451	ENSCSAG00000006500	TRMT1	87	72.451	Chlorocebus_sabaeus
ENSXETG00000033863	TRMT1	97	73.101	ENSCPBG00000023866	TRMT1	73	73.101	Chrysemys_picta_bellii
ENSXETG00000033863	TRMT1	91	50.218	ENSCING00000002884	-	81	50.218	Ciona_intestinalis
ENSXETG00000033863	TRMT1	91	49.345	ENSCSAVG00000010927	-	86	47.854	Ciona_savignyi
ENSXETG00000033863	TRMT1	88	54.299	ENSCANG00000031650	-	68	54.299	Colobus_angolensis_palliatus
ENSXETG00000033863	TRMT1	88	56.818	ENSCANG00000040631	TRMT1	67	56.818	Colobus_angolensis_palliatus
ENSXETG00000033863	TRMT1	94	69.198	ENSCGRG00001022594	Trmt1	73	69.198	Cricetulus_griseus_chok1gshd
ENSXETG00000033863	TRMT1	94	69.198	ENSCGRG00000017732	Trmt1	71	69.198	Cricetulus_griseus_crigri
ENSXETG00000033863	TRMT1	92	70.217	ENSCSEG00000001643	trmt1	75	70.217	Cynoglossus_semilaevis
ENSXETG00000033863	TRMT1	92	70.000	ENSCVAG00000011886	trmt1	70	70.000	Cyprinodon_variegatus
ENSXETG00000033863	TRMT1	92	67.872	ENSDARG00000010978	trmt1	70	67.872	Danio_rerio
ENSXETG00000033863	TRMT1	79	46.883	ENSDNOG00000048240	-	68	46.883	Dasypus_novemcinctus
ENSXETG00000033863	TRMT1	92	68.534	ENSDORG00000014298	Trmt1	70	68.534	Dipodomys_ordii
ENSXETG00000033863	TRMT1	92	49.786	FBgn0032430	CG6388	78	49.786	Drosophila_melanogaster
ENSXETG00000033863	TRMT1	92	52.070	ENSEBUG00000003449	trmt1	65	52.070	Eptatretus_burgeri
ENSXETG00000033863	TRMT1	92	71.584	ENSEASG00005004050	TRMT1	72	71.584	Equus_asinus_asinus
ENSXETG00000033863	TRMT1	92	71.584	ENSECAG00000016149	TRMT1	72	71.584	Equus_caballus
ENSXETG00000033863	TRMT1	50	74.502	ENSEEUG00000014102	-	64	74.502	Erinaceus_europaeus
ENSXETG00000033863	TRMT1	92	66.309	ENSELUG00000021659	trmt1	70	66.309	Esox_lucius
ENSXETG00000033863	TRMT1	92	72.017	ENSFCAG00000000483	TRMT1	70	72.017	Felis_catus
ENSXETG00000033863	TRMT1	95	69.439	ENSFDAG00000007386	TRMT1	73	69.439	Fukomys_damarensis
ENSXETG00000033863	TRMT1	92	70.933	ENSFHEG00000012865	trmt1	77	70.716	Fundulus_heteroclitus
ENSXETG00000033863	TRMT1	92	63.696	ENSGMOG00000006564	trmt1	80	63.696	Gadus_morhua
ENSXETG00000033863	TRMT1	92	70.000	ENSGAFG00000011862	trmt1	72	70.217	Gambusia_affinis
ENSXETG00000033863	TRMT1	92	70.000	ENSGACG00000000227	trmt1	75	70.000	Gasterosteus_aculeatus
ENSXETG00000033863	TRMT1	95	74.051	ENSGAGG00000016432	TRMT1	75	74.051	Gopherus_agassizii
ENSXETG00000033863	TRMT1	92	71.800	ENSGGOG00000014007	TRMT1	70	71.800	Gorilla_gorilla
ENSXETG00000033863	TRMT1	89	61.745	ENSHBUG00000008821	trmt1	75	61.745	Haplochromis_burtoni
ENSXETG00000033863	TRMT1	92	69.612	ENSHGLG00000015972	TRMT1	71	69.612	Heterocephalus_glaber_female
ENSXETG00000033863	TRMT1	92	69.677	ENSHGLG00100018112	TRMT1	76	69.677	Heterocephalus_glaber_male
ENSXETG00000033863	TRMT1	92	67.391	ENSHCOG00000009447	trmt1	71	67.391	Hippocampus_comes
ENSXETG00000033863	TRMT1	92	67.932	ENSIPUG00000002899	trmt1	69	68.776	Ictalurus_punctatus
ENSXETG00000033863	TRMT1	92	70.259	ENSSTOG00000012531	TRMT1	71	70.259	Ictidomys_tridecemlineatus
ENSXETG00000033863	TRMT1	92	69.528	ENSJJAG00000017154	Trmt1	71	69.528	Jaculus_jaculus
ENSXETG00000033863	TRMT1	99	66.197	ENSKMAG00000011809	trmt1	77	68.764	Kryptolebias_marmoratus
ENSXETG00000033863	TRMT1	92	68.478	ENSLBEG00000012703	trmt1	68	68.478	Labrus_bergylta
ENSXETG00000033863	TRMT1	92	60.776	ENSLACG00000014585	TRMT1	76	60.730	Latimeria_chalumnae
ENSXETG00000033863	TRMT1	92	69.348	ENSLOCG00000006479	trmt1	80	69.348	Lepisosteus_oculatus
ENSXETG00000033863	TRMT1	92	72.017	ENSLAFG00000014072	TRMT1	71	72.017	Loxodonta_africana
ENSXETG00000033863	TRMT1	92	72.668	ENSMFAG00000033143	TRMT1	70	72.668	Macaca_fascicularis
ENSXETG00000033863	TRMT1	92	69.978	ENSMMUG00000001167	TRMT1	73	69.978	Macaca_mulatta
ENSXETG00000033863	TRMT1	92	72.451	ENSMNEG00000037867	TRMT1	70	72.451	Macaca_nemestrina
ENSXETG00000033863	TRMT1	92	72.668	ENSMLEG00000016142	TRMT1	70	72.668	Mandrillus_leucophaeus
ENSXETG00000033863	TRMT1	92	70.217	ENSMAMG00000004357	trmt1	69	70.217	Mastacembelus_armatus
ENSXETG00000033863	TRMT1	90	71.429	ENSMZEG00005014510	trmt1	69	71.429	Maylandia_zebra
ENSXETG00000033863	TRMT1	91	71.397	ENSMAUG00000011134	Trmt1	69	71.397	Mesocricetus_auratus
ENSXETG00000033863	TRMT1	92	72.234	ENSMICG00000000793	TRMT1	70	72.234	Microcebus_murinus
ENSXETG00000033863	TRMT1	94	68.987	ENSMOCG00000015895	Trmt1	72	68.987	Microtus_ochrogaster
ENSXETG00000033863	TRMT1	92	67.826	ENSMMOG00000011097	trmt1	74	67.826	Mola_mola
ENSXETG00000033863	TRMT1	92	71.367	ENSMODG00000011619	TRMT1	75	71.367	Monodelphis_domestica
ENSXETG00000033863	TRMT1	94	70.042	MGP_CAROLIEiJ_G0031304	Trmt1	93	64.490	Mus_caroli
ENSXETG00000033863	TRMT1	91	71.834	ENSMUSG00000001909	Trmt1	87	67.249	Mus_musculus
ENSXETG00000033863	TRMT1	94	69.831	MGP_SPRETEiJ_G0032422	Trmt1	93	63.673	Mus_spretus
ENSXETG00000033863	TRMT1	92	71.800	ENSMPUG00000004210	TRMT1	66	71.800	Mustela_putorius_furo
ENSXETG00000033863	TRMT1	92	72.668	ENSMLUG00000012809	TRMT1	69	72.668	Myotis_lucifugus
ENSXETG00000033863	TRMT1	91	71.834	ENSNGAG00000022486	Trmt1	69	71.834	Nannospalax_galili
ENSXETG00000033863	TRMT1	77	76.786	ENSNBRG00000024376	trmt1	66	76.786	Neolamprologus_brichardi
ENSXETG00000033863	TRMT1	68	81.633	ENSNLEG00000013019	-	63	81.633	Nomascus_leucogenys
ENSXETG00000033863	TRMT1	92	71.150	ENSMEUG00000013756	TRMT1	78	71.150	Notamacropus_eugenii
ENSXETG00000033863	TRMT1	69	75.000	ENSOPRG00000009471	-	54	75.000	Ochotona_princeps
ENSXETG00000033863	TRMT1	92	70.690	ENSODEG00000010323	TRMT1	71	70.690	Octodon_degus
ENSXETG00000033863	TRMT1	92	71.522	ENSONIG00000000400	trmt1	75	71.429	Oreochromis_niloticus
ENSXETG00000033863	TRMT1	92	72.511	ENSOCUG00000021934	TRMT1	87	72.511	Oryctolagus_cuniculus
ENSXETG00000033863	TRMT1	90	69.265	ENSORLG00000020074	trmt1	71	69.265	Oryzias_latipes
ENSXETG00000033863	TRMT1	92	69.783	ENSORLG00020007561	trmt1	73	68.980	Oryzias_latipes_hni
ENSXETG00000033863	TRMT1	92	69.565	ENSORLG00015006547	trmt1	70	69.565	Oryzias_latipes_hsok
ENSXETG00000033863	TRMT1	92	70.000	ENSOMEG00000019343	trmt1	70	70.000	Oryzias_melastigma
ENSXETG00000033863	TRMT1	92	71.274	ENSOGAG00000025576	TRMT1	73	71.274	Otolemur_garnettii
ENSXETG00000033863	TRMT1	92	56.710	ENSOARG00000009397	TRMT1	64	57.143	Ovis_aries
ENSXETG00000033863	TRMT1	92	62.771	ENSPPRG00000012117	TRMT1	69	64.069	Panthera_pardus
ENSXETG00000033863	TRMT1	63	78.125	ENSPTIG00000008833	TRMT1	61	78.125	Panthera_tigris_altaica
ENSXETG00000033863	TRMT1	92	71.800	ENSPTRG00000010557	TRMT1	70	71.800	Pan_troglodytes
ENSXETG00000033863	TRMT1	89	50.989	ENSPTRG00000050421	-	71	50.989	Pan_troglodytes
ENSXETG00000033863	TRMT1	92	72.668	ENSPANG00000009247	TRMT1	70	72.668	Papio_anubis
ENSXETG00000033863	TRMT1	96	55.624	ENSPANG00000034058	-	85	55.624	Papio_anubis
ENSXETG00000033863	TRMT1	92	69.197	ENSPKIG00000005309	trmt1	68	69.197	Paramormyrops_kingsleyae
ENSXETG00000033863	TRMT1	94	57.384	ENSPSIG00000008762	TRMT1	68	57.384	Pelodiscus_sinensis
ENSXETG00000033863	TRMT1	92	70.435	ENSPMGG00000019764	trmt1	73	70.652	Periophthalmus_magnuspinnatus
ENSXETG00000033863	TRMT1	94	69.831	ENSPEMG00000016247	Trmt1	71	69.831	Peromyscus_maniculatus_bairdii
ENSXETG00000033863	TRMT1	99	62.675	ENSPMAG00000004329	trmt1	79	62.675	Petromyzon_marinus
ENSXETG00000033863	TRMT1	92	72.017	ENSPCIG00000019273	TRMT1	71	72.017	Phascolarctos_cinereus
ENSXETG00000033863	TRMT1	92	70.435	ENSPFOG00000008527	trmt1	71	70.435	Poecilia_formosa
ENSXETG00000033863	TRMT1	92	70.435	ENSPLAG00000018788	trmt1	78	70.435	Poecilia_latipinna
ENSXETG00000033863	TRMT1	92	70.217	ENSPMEG00000013120	trmt1	71	70.217	Poecilia_mexicana
ENSXETG00000033863	TRMT1	92	69.130	ENSPREG00000000211	trmt1	69	69.348	Poecilia_reticulata
ENSXETG00000033863	TRMT1	92	71.800	ENSPPYG00000009622	TRMT1	70	71.800	Pongo_abelii
ENSXETG00000033863	TRMT1	95	62.422	ENSPCAG00000003698	TRMT1	73	62.422	Procavia_capensis
ENSXETG00000033863	TRMT1	92	71.800	ENSPCOG00000008653	TRMT1	70	71.800	Propithecus_coquereli
ENSXETG00000033863	TRMT1	92	71.367	ENSPVAG00000015076	TRMT1	70	71.367	Pteropus_vampyrus
ENSXETG00000033863	TRMT1	92	65.870	ENSPNYG00000013960	trmt1	74	65.870	Pundamilia_nyererei
ENSXETG00000033863	TRMT1	72	71.858	ENSPNAG00000024859	trmt1	64	71.858	Pygocentrus_nattereri
ENSXETG00000033863	TRMT1	94	69.198	ENSRNOG00000002914	Trmt1	74	69.198	Rattus_norvegicus
ENSXETG00000033863	TRMT1	84	55.213	ENSRBIG00000037505	-	66	55.213	Rhinopithecus_bieti
ENSXETG00000033863	TRMT1	92	71.800	ENSRBIG00000038324	TRMT1	70	71.800	Rhinopithecus_bieti
ENSXETG00000033863	TRMT1	92	72.017	ENSRROG00000028599	TRMT1	70	72.017	Rhinopithecus_roxellana
ENSXETG00000033863	TRMT1	87	52.955	ENSRROG00000031847	-	68	52.955	Rhinopithecus_roxellana
ENSXETG00000033863	TRMT1	89	39.606	YDR120C	-	79	39.825	Saccharomyces_cerevisiae
ENSXETG00000033863	TRMT1	92	68.330	ENSSBOG00000028861	TRMT1	74	68.330	Saimiri_boliviensis_boliviensis
ENSXETG00000033863	TRMT1	92	71.367	ENSSHAG00000014381	TRMT1	75	71.367	Sarcophilus_harrisii
ENSXETG00000033863	TRMT1	92	69.783	ENSSFOG00015004139	trmt1	68	69.783	Scleropages_formosus
ENSXETG00000033863	TRMT1	92	70.043	ENSSMAG00000021136	trmt1	69	70.043	Scophthalmus_maximus
ENSXETG00000033863	TRMT1	92	69.783	ENSSDUG00000012740	trmt1	68	69.783	Seriola_dumerili
ENSXETG00000033863	TRMT1	92	69.348	ENSSLDG00000005971	trmt1	68	69.348	Seriola_lalandi_dorsalis
ENSXETG00000033863	TRMT1	92	68.455	ENSSARG00000005138	TRMT1	82	68.455	Sorex_araneus
ENSXETG00000033863	TRMT1	92	58.155	ENSSPUG00000001084	TRMT1	78	58.405	Sphenodon_punctatus
ENSXETG00000033863	TRMT1	90	69.643	ENSSPAG00000007153	trmt1	76	69.643	Stegastes_partitus
ENSXETG00000033863	TRMT1	92	72.234	ENSSSCG00000013744	TRMT1	72	72.234	Sus_scrofa
ENSXETG00000033863	TRMT1	92	65.532	ENSTRUG00000010700	trmt1	71	65.532	Takifugu_rubripes
ENSXETG00000033863	TRMT1	92	68.764	ENSTNIG00000018808	trmt1	79	68.764	Tetraodon_nigroviridis
ENSXETG00000033863	TRMT1	92	68.980	ENSTTRG00000006379	TRMT1	70	68.980	Tursiops_truncatus
ENSXETG00000033863	TRMT1	92	71.800	ENSUAMG00000022911	TRMT1	78	69.787	Ursus_americanus
ENSXETG00000033863	TRMT1	92	71.367	ENSUMAG00000006027	TRMT1	72	71.367	Ursus_maritimus
ENSXETG00000033863	TRMT1	92	72.017	ENSVVUG00000024177	TRMT1	70	72.017	Vulpes_vulpes
ENSXETG00000033863	TRMT1	92	69.565	ENSXCOG00000015733	trmt1	71	69.783	Xiphophorus_couchianus
ENSXETG00000033863	TRMT1	93	69.181	ENSXMAG00000013823	trmt1	80	69.397	Xiphophorus_maculatus