EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000033900 (Gene tree)
Gene ID: -
Gene Symbol: zc3hc1
Alias: nipa
Full Name: Xenopus tropicalis zinc finger%2C C3HC-type containing 1 (zc3hc1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 13250 bases
Position: chrGL172647.1:1122759-1136008
Accession: NM_001011259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000059993	zf-C3HC	PF07967.13	1.3e-33	1	1
ENSXETP00000059993	Rsm1	PF08600.10	5.8e-30	1	2
ENSXETP00000059993	Rsm1	PF08600.10	5.8e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000061662	-	1884	-	ENSXETP00000059993	465 (aa)	-	F7DG41

Gene Model

Click here to download ENSXETG00000033900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000033900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000033900	zc3hc1	95	52.361	ENSG00000091732	ZC3HC1	91	52.361	Homo_sapiens
ENSXETG00000033900	zc3hc1	92	41.416	ENSAPOG00000009078	zc3hc1	89	41.202	Acanthochromis_polyacanthus
ENSXETG00000033900	zc3hc1	96	52.891	ENSAMEG00000005425	ZC3HC1	91	52.891	Ailuropoda_melanoleuca
ENSXETG00000033900	zc3hc1	92	39.913	ENSACIG00000019513	zc3hc1	89	39.913	Amphilophus_citrinellus
ENSXETG00000033900	zc3hc1	94	40.890	ENSAOCG00000024310	zc3hc1	90	41.226	Amphiprion_ocellaris
ENSXETG00000033900	zc3hc1	94	40.890	ENSAPEG00000004907	zc3hc1	90	41.314	Amphiprion_percula
ENSXETG00000033900	zc3hc1	84	41.706	ENSATEG00000016898	zc3hc1	84	41.706	Anabas_testudineus
ENSXETG00000033900	zc3hc1	84	51.456	ENSAPLG00000003832	ZC3HC1	91	51.456	Anas_platyrhynchos
ENSXETG00000033900	zc3hc1	95	51.178	ENSACAG00000001638	ZC3HC1	91	51.178	Anolis_carolinensis
ENSXETG00000033900	zc3hc1	95	51.288	ENSANAG00000022213	ZC3HC1	91	51.288	Aotus_nancymaae
ENSXETG00000033900	zc3hc1	85	40.749	ENSACLG00000025033	zc3hc1	90	40.749	Astatotilapia_calliptera
ENSXETG00000033900	zc3hc1	95	45.316	ENSAMXG00000036792	zc3hc1	94	45.316	Astyanax_mexicanus
ENSXETG00000033900	zc3hc1	94	53.247	ENSBTAG00000011247	ZC3HC1	90	53.247	Bos_taurus
ENSXETG00000033900	zc3hc1	95	52.677	ENSCJAG00000010536	ZC3HC1	91	52.677	Callithrix_jacchus
ENSXETG00000033900	zc3hc1	95	53.004	ENSCAFG00000028735	-	91	53.004	Canis_familiaris
ENSXETG00000033900	zc3hc1	95	53.004	ENSCAFG00000031850	-	91	53.004	Canis_familiaris
ENSXETG00000033900	zc3hc1	95	53.004	ENSCAFG00000029401	-	90	53.004	Canis_familiaris
ENSXETG00000033900	zc3hc1	95	52.790	ENSCAFG00000001499	-	90	52.790	Canis_familiaris
ENSXETG00000033900	zc3hc1	95	52.790	ENSCAFG00020006829	-	91	52.790	Canis_lupus_dingo
ENSXETG00000033900	zc3hc1	95	51.502	ENSCAFG00020023333	-	91	51.502	Canis_lupus_dingo
ENSXETG00000033900	zc3hc1	96	46.610	ENSCHIG00000014103	ZC3HC1	91	46.610	Capra_hircus
ENSXETG00000033900	zc3hc1	95	52.903	ENSTSYG00000002843	ZC3HC1	91	52.903	Carlito_syrichta
ENSXETG00000033900	zc3hc1	88	39.540	ENSCAPG00000016300	ZC3HC1	98	39.540	Cavia_aperea
ENSXETG00000033900	zc3hc1	95	50.000	ENSCPOG00000014034	ZC3HC1	95	50.000	Cavia_porcellus
ENSXETG00000033900	zc3hc1	95	38.544	ENSCCAG00000020384	ZC3HC1	90	47.573	Cebus_capucinus
ENSXETG00000033900	zc3hc1	95	51.931	ENSCATG00000023130	ZC3HC1	91	51.931	Cercocebus_atys
ENSXETG00000033900	zc3hc1	95	37.744	ENSCLAG00000008260	ZC3HC1	89	38.745	Chinchilla_lanigera
ENSXETG00000033900	zc3hc1	70	49.422	ENSCSAG00000009881	ZC3HC1	91	49.422	Chlorocebus_sabaeus
ENSXETG00000033900	zc3hc1	85	54.699	ENSCHOG00000011846	ZC3HC1	90	54.699	Choloepus_hoffmanni
ENSXETG00000033900	zc3hc1	95	54.978	ENSCPBG00000017519	ZC3HC1	91	54.978	Chrysemys_picta_bellii
ENSXETG00000033900	zc3hc1	56	30.483	ENSCING00000004440	-	63	30.483	Ciona_intestinalis
ENSXETG00000033900	zc3hc1	95	51.502	ENSCANG00000029091	ZC3HC1	91	51.502	Colobus_angolensis_palliatus
ENSXETG00000033900	zc3hc1	96	52.463	ENSCGRG00001018805	Zc3hc1	95	52.463	Cricetulus_griseus_chok1gshd
ENSXETG00000033900	zc3hc1	95	51.398	ENSCGRG00000017114	Zc3hc1	91	51.398	Cricetulus_griseus_crigri
ENSXETG00000033900	zc3hc1	96	38.445	ENSCSEG00000009284	zc3hc1	89	38.445	Cynoglossus_semilaevis
ENSXETG00000033900	zc3hc1	92	41.037	ENSCVAG00000011566	zc3hc1	88	41.037	Cyprinodon_variegatus
ENSXETG00000033900	zc3hc1	94	44.492	ENSDARG00000062651	zc3hc1	90	44.492	Danio_rerio
ENSXETG00000033900	zc3hc1	95	52.008	ENSDNOG00000045016	ZC3HC1	91	52.008	Dasypus_novemcinctus
ENSXETG00000033900	zc3hc1	95	48.283	ENSDORG00000008697	Zc3hc1	91	48.283	Dipodomys_ordii
ENSXETG00000033900	zc3hc1	85	54.217	ENSEASG00005008789	ZC3HC1	88	54.217	Equus_asinus_asinus
ENSXETG00000033900	zc3hc1	95	51.931	ENSECAG00000017886	ZC3HC1	91	51.931	Equus_caballus
ENSXETG00000033900	zc3hc1	80	52.174	ENSEEUG00000003123	ZC3HC1	74	52.174	Erinaceus_europaeus
ENSXETG00000033900	zc3hc1	95	45.094	ENSELUG00000023168	zc3hc1	90	45.684	Esox_lucius
ENSXETG00000033900	zc3hc1	95	52.575	ENSFCAG00000010429	ZC3HC1	91	52.575	Felis_catus
ENSXETG00000033900	zc3hc1	89	50.000	ENSFALG00000005006	ZC3HC1	94	50.228	Ficedula_albicollis
ENSXETG00000033900	zc3hc1	95	51.613	ENSFDAG00000019897	ZC3HC1	91	51.613	Fukomys_damarensis
ENSXETG00000033900	zc3hc1	92	40.476	ENSFHEG00000020149	zc3hc1	89	40.476	Fundulus_heteroclitus
ENSXETG00000033900	zc3hc1	92	38.000	ENSGMOG00000002914	zc3hc1	88	39.333	Gadus_morhua
ENSXETG00000033900	zc3hc1	93	53.898	ENSGALG00000008003	ZC3HC1	90	53.898	Gallus_gallus
ENSXETG00000033900	zc3hc1	92	39.565	ENSGAFG00000016095	zc3hc1	89	39.565	Gambusia_affinis
ENSXETG00000033900	zc3hc1	92	41.794	ENSGACG00000019706	zc3hc1	88	41.758	Gasterosteus_aculeatus
ENSXETG00000033900	zc3hc1	74	54.496	ENSGAGG00000016106	ZC3HC1	93	54.496	Gopherus_agassizii
ENSXETG00000033900	zc3hc1	95	52.575	ENSGGOG00000015504	ZC3HC1	91	52.575	Gorilla_gorilla
ENSXETG00000033900	zc3hc1	95	40.169	ENSHBUG00000008347	zc3hc1	91	40.169	Haplochromis_burtoni
ENSXETG00000033900	zc3hc1	95	51.828	ENSHGLG00000005085	ZC3HC1	95	51.828	Heterocephalus_glaber_female
ENSXETG00000033900	zc3hc1	95	51.828	ENSHGLG00100011395	ZC3HC1	95	51.828	Heterocephalus_glaber_male
ENSXETG00000033900	zc3hc1	96	37.975	ENSHCOG00000014309	zc3hc1	94	39.451	Hippocampus_comes
ENSXETG00000033900	zc3hc1	95	51.073	ENSSTOG00000023599	-	91	51.073	Ictidomys_tridecemlineatus
ENSXETG00000033900	zc3hc1	94	40.638	ENSKMAG00000015315	zc3hc1	84	40.638	Kryptolebias_marmoratus
ENSXETG00000033900	zc3hc1	94	40.295	ENSLBEG00000017325	zc3hc1	90	40.295	Labrus_bergylta
ENSXETG00000033900	zc3hc1	80	50.250	ENSLACG00000013032	ZC3HC1	95	50.250	Latimeria_chalumnae
ENSXETG00000033900	zc3hc1	97	46.526	ENSLOCG00000015963	zc3hc1	93	46.947	Lepisosteus_oculatus
ENSXETG00000033900	zc3hc1	95	52.331	ENSLAFG00000001292	ZC3HC1	91	52.331	Loxodonta_africana
ENSXETG00000033900	zc3hc1	95	51.931	ENSMFAG00000030176	ZC3HC1	91	51.931	Macaca_fascicularis
ENSXETG00000033900	zc3hc1	95	51.073	ENSMMUG00000006155	ZC3HC1	91	51.073	Macaca_mulatta
ENSXETG00000033900	zc3hc1	95	52.146	ENSMNEG00000011833	ZC3HC1	91	52.146	Macaca_nemestrina
ENSXETG00000033900	zc3hc1	95	51.931	ENSMLEG00000027328	ZC3HC1	91	51.931	Mandrillus_leucophaeus
ENSXETG00000033900	zc3hc1	94	42.171	ENSMAMG00000010691	zc3hc1	90	42.171	Mastacembelus_armatus
ENSXETG00000033900	zc3hc1	95	39.958	ENSMZEG00005007142	zc3hc1	91	39.958	Maylandia_zebra
ENSXETG00000033900	zc3hc1	93	52.527	ENSMGAG00000002977	ZC3HC1	90	53.201	Meleagris_gallopavo
ENSXETG00000033900	zc3hc1	79	48.731	ENSMAUG00000017032	Zc3hc1	86	48.731	Mesocricetus_auratus
ENSXETG00000033900	zc3hc1	95	52.083	ENSMICG00000009167	ZC3HC1	91	51.717	Microcebus_murinus
ENSXETG00000033900	zc3hc1	94	53.829	ENSMOCG00000015239	Zc3hc1	93	53.829	Microtus_ochrogaster
ENSXETG00000033900	zc3hc1	82	40.887	ENSMMOG00000002204	zc3hc1	90	40.887	Mola_mola
ENSXETG00000033900	zc3hc1	96	43.326	ENSMODG00000014630	ZC3HC1	91	43.326	Monodelphis_domestica
ENSXETG00000033900	zc3hc1	94	41.649	ENSMALG00000014447	zc3hc1	90	41.949	Monopterus_albus
ENSXETG00000033900	zc3hc1	96	52.146	MGP_CAROLIEiJ_G0028183	Zc3hc1	95	52.146	Mus_caroli
ENSXETG00000033900	zc3hc1	96	52.248	ENSMUSG00000039130	Zc3hc1	95	52.248	Mus_musculus
ENSXETG00000033900	zc3hc1	96	45.610	MGP_PahariEiJ_G0021941	Zc3hc1	95	45.610	Mus_pahari
ENSXETG00000033900	zc3hc1	96	52.350	MGP_SPRETEiJ_G0029183	Zc3hc1	92	52.350	Mus_spretus
ENSXETG00000033900	zc3hc1	96	52.350	ENSMPUG00000005297	ZC3HC1	91	52.350	Mustela_putorius_furo
ENSXETG00000033900	zc3hc1	95	51.183	ENSMLUG00000000063	-	91	52.258	Myotis_lucifugus
ENSXETG00000033900	zc3hc1	63	48.113	ENSMLUG00000029228	-	91	48.113	Myotis_lucifugus
ENSXETG00000033900	zc3hc1	95	52.146	ENSNGAG00000019014	Zc3hc1	95	52.146	Nannospalax_galili
ENSXETG00000033900	zc3hc1	94	41.239	ENSNBRG00000004577	zc3hc1	90	41.239	Neolamprologus_brichardi
ENSXETG00000033900	zc3hc1	95	51.931	ENSNLEG00000012698	ZC3HC1	91	51.931	Nomascus_leucogenys
ENSXETG00000033900	zc3hc1	96	52.991	ENSMEUG00000011023	ZC3HC1	92	52.991	Notamacropus_eugenii
ENSXETG00000033900	zc3hc1	65	52.245	ENSOPRG00000007867	-	62	54.286	Ochotona_princeps
ENSXETG00000033900	zc3hc1	94	52.183	ENSODEG00000014604	ZC3HC1	90	52.183	Octodon_degus
ENSXETG00000033900	zc3hc1	95	40.254	ENSONIG00000011644	zc3hc1	91	40.254	Oreochromis_niloticus
ENSXETG00000033900	zc3hc1	89	48.655	ENSOANG00000011460	ZC3HC1	95	48.879	Ornithorhynchus_anatinus
ENSXETG00000033900	zc3hc1	94	51.416	ENSOCUG00000017137	ZC3HC1	90	51.416	Oryctolagus_cuniculus
ENSXETG00000033900	zc3hc1	94	39.787	ENSORLG00000014409	zc3hc1	90	39.574	Oryzias_latipes
ENSXETG00000033900	zc3hc1	94	39.787	ENSORLG00020015874	zc3hc1	90	39.574	Oryzias_latipes_hni
ENSXETG00000033900	zc3hc1	94	39.574	ENSORLG00015014641	zc3hc1	90	39.362	Oryzias_latipes_hsok
ENSXETG00000033900	zc3hc1	95	40.305	ENSOMEG00000020604	zc3hc1	90	39.232	Oryzias_melastigma
ENSXETG00000033900	zc3hc1	95	40.043	ENSOMEG00000000215	zc3hc1	90	39.407	Oryzias_melastigma
ENSXETG00000033900	zc3hc1	95	47.009	ENSOGAG00000026193	ZC3HC1	91	46.996	Otolemur_garnettii
ENSXETG00000033900	zc3hc1	96	52.442	ENSOARG00000004907	ZC3HC1	90	52.442	Ovis_aries
ENSXETG00000033900	zc3hc1	95	52.575	ENSPPAG00000043172	ZC3HC1	91	52.575	Pan_paniscus
ENSXETG00000033900	zc3hc1	95	52.361	ENSPPRG00000001004	ZC3HC1	91	52.361	Panthera_pardus
ENSXETG00000033900	zc3hc1	95	52.575	ENSPTIG00000007823	ZC3HC1	91	52.575	Panthera_tigris_altaica
ENSXETG00000033900	zc3hc1	95	52.575	ENSPTRG00000019685	ZC3HC1	91	52.575	Pan_troglodytes
ENSXETG00000033900	zc3hc1	95	50.858	ENSPANG00000014229	ZC3HC1	91	50.858	Papio_anubis
ENSXETG00000033900	zc3hc1	97	42.918	ENSPKIG00000007172	zc3hc1	93	42.918	Paramormyrops_kingsleyae
ENSXETG00000033900	zc3hc1	91	49.558	ENSPSIG00000016646	ZC3HC1	88	50.442	Pelodiscus_sinensis
ENSXETG00000033900	zc3hc1	98	38.017	ENSPMGG00000003548	zc3hc1	93	39.175	Periophthalmus_magnuspinnatus
ENSXETG00000033900	zc3hc1	96	51.392	ENSPEMG00000000514	Zc3hc1	95	51.392	Peromyscus_maniculatus_bairdii
ENSXETG00000033900	zc3hc1	96	49.894	ENSPCIG00000020619	ZC3HC1	94	52.846	Phascolarctos_cinereus
ENSXETG00000033900	zc3hc1	92	39.610	ENSPFOG00000003466	zc3hc1	89	39.610	Poecilia_formosa
ENSXETG00000033900	zc3hc1	92	39.394	ENSPLAG00000022211	zc3hc1	89	39.394	Poecilia_latipinna
ENSXETG00000033900	zc3hc1	92	39.394	ENSPMEG00000001458	zc3hc1	89	39.394	Poecilia_mexicana
ENSXETG00000033900	zc3hc1	92	39.394	ENSPREG00000004004	zc3hc1	89	39.394	Poecilia_reticulata
ENSXETG00000033900	zc3hc1	95	47.650	ENSPPYG00000017998	ZC3HC1	91	47.650	Pongo_abelii
ENSXETG00000033900	zc3hc1	84	52.983	ENSPCAG00000001182	ZC3HC1	89	52.857	Procavia_capensis
ENSXETG00000033900	zc3hc1	95	52.381	ENSPCOG00000017354	ZC3HC1	91	51.931	Propithecus_coquereli
ENSXETG00000033900	zc3hc1	95	48.305	ENSPVAG00000003195	ZC3HC1	91	48.941	Pteropus_vampyrus
ENSXETG00000033900	zc3hc1	95	39.958	ENSPNYG00000020692	zc3hc1	91	39.958	Pundamilia_nyererei
ENSXETG00000033900	zc3hc1	93	43.722	ENSPNAG00000020746	zc3hc1	90	43.722	Pygocentrus_nattereri
ENSXETG00000033900	zc3hc1	95	51.828	ENSRNOG00000010154	Zc3hc1	91	51.828	Rattus_norvegicus
ENSXETG00000033900	zc3hc1	89	51.716	ENSRBIG00000029409	ZC3HC1	95	51.716	Rhinopithecus_bieti
ENSXETG00000033900	zc3hc1	95	51.502	ENSRROG00000041831	ZC3HC1	91	51.502	Rhinopithecus_roxellana
ENSXETG00000033900	zc3hc1	76	59.167	ENSSBOG00000032787	ZC3HC1	90	59.167	Saimiri_boliviensis_boliviensis
ENSXETG00000033900	zc3hc1	85	54.676	ENSSHAG00000002529	ZC3HC1	94	52.727	Sarcophilus_harrisii
ENSXETG00000033900	zc3hc1	97	44.211	ENSSFOG00015003667	zc3hc1	89	44.211	Scleropages_formosus
ENSXETG00000033900	zc3hc1	92	39.651	ENSSMAG00000000647	zc3hc1	80	40.305	Scophthalmus_maximus
ENSXETG00000033900	zc3hc1	95	40.381	ENSSDUG00000004241	zc3hc1	89	40.381	Seriola_dumerili
ENSXETG00000033900	zc3hc1	95	41.263	ENSSLDG00000025056	zc3hc1	89	40.506	Seriola_lalandi_dorsalis
ENSXETG00000033900	zc3hc1	94	46.507	ENSSARG00000012013	ZC3HC1	90	47.598	Sorex_araneus
ENSXETG00000033900	zc3hc1	88	49.417	ENSSPUG00000000778	ZC3HC1	84	49.417	Sphenodon_punctatus
ENSXETG00000033900	zc3hc1	94	41.597	ENSSPAG00000020041	zc3hc1	90	41.525	Stegastes_partitus
ENSXETG00000033900	zc3hc1	95	52.026	ENSSSCG00000016565	ZC3HC1	94	51.359	Sus_scrofa
ENSXETG00000033900	zc3hc1	94	40.175	ENSTRUG00000020077	zc3hc1	90	40.175	Takifugu_rubripes
ENSXETG00000033900	zc3hc1	94	41.176	ENSTNIG00000007585	zc3hc1	94	40.830	Tetraodon_nigroviridis
ENSXETG00000033900	zc3hc1	82	51.039	ENSTBEG00000005216	ZC3HC1	79	51.039	Tupaia_belangeri
ENSXETG00000033900	zc3hc1	95	50.427	ENSTTRG00000008458	ZC3HC1	95	51.496	Tursiops_truncatus
ENSXETG00000033900	zc3hc1	95	52.575	ENSUAMG00000020249	ZC3HC1	91	52.575	Ursus_americanus
ENSXETG00000033900	zc3hc1	95	52.361	ENSUMAG00000009268	ZC3HC1	91	52.361	Ursus_maritimus
ENSXETG00000033900	zc3hc1	68	46.462	ENSVPAG00000010846	ZC3HC1	62	46.462	Vicugna_pacos
ENSXETG00000033900	zc3hc1	95	52.575	ENSVVUG00000012386	ZC3HC1	95	52.575	Vulpes_vulpes
ENSXETG00000033900	zc3hc1	92	39.207	ENSXCOG00000013570	zc3hc1	89	39.207	Xiphophorus_couchianus
ENSXETG00000033900	zc3hc1	85	39.394	ENSXMAG00000010979	zc3hc1	88	39.394	Xiphophorus_maculatus