EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000034004 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 681 bases
Position: chrGL173540.1:105255-105935
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060427	zf-CCHC	PF00098.23	2.5e-09	1	2
ENSXETP00000060427	zf-CCHC	PF00098.23	2.5e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000063328	-	567	-	ENSXETP00000060427	189 (aa)	-	F6T017

Gene Model

Click here to download ENSXETG00000034004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000034004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000034004	-	96	49.724	ENSXETG00000033341	-	97	50.833
ENSXETG00000034004	-	93	35.196	ENSXETG00000030090	-	88	35.196
ENSXETG00000034004	-	92	50.000	ENSXETG00000005590	-	58	50.000
ENSXETG00000034004	-	100	99.471	ENSXETG00000033566	-	100	99.471
ENSXETG00000034004	-	100	98.413	ENSXETG00000033553	-	100	98.413
ENSXETG00000034004	-	74	51.079	ENSXETG00000033641	-	88	51.079
ENSXETG00000034004	-	100	99.471	ENSXETG00000034120	-	100	99.471
ENSXETG00000034004	-	100	99.471	ENSXETG00000033661	-	100	99.471
ENSXETG00000034004	-	70	33.099	ENSXETG00000034305	-	85	33.099
ENSXETG00000034004	-	82	97.500	ENSXETG00000033143	-	85	97.500
ENSXETG00000034004	-	72	50.435	ENSXETG00000032242	-	93	50.435
ENSXETG00000034004	-	94	50.847	ENSXETG00000031282	-	94	50.847
ENSXETG00000034004	-	94	50.847	ENSXETG00000032402	-	89	55.405
ENSXETG00000034004	-	94	47.753	ENSXETG00000031539	-	94	47.753
ENSXETG00000034004	-	97	49.180	ENSXETG00000032297	-	96	49.180
ENSXETG00000034004	-	100	96.825	ENSXETG00000030911	-	100	96.825

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000034004	-	100	40.838	ENSAMEG00000013999	ZCCHC3	62	40.838	Ailuropoda_melanoleuca
ENSXETG00000034004	-	83	35.404	ENSATEG00000004599	-	70	36.076	Anabas_testudineus
ENSXETG00000034004	-	77	39.597	ENSACLG00000014014	-	70	39.597	Astatotilapia_calliptera
ENSXETG00000034004	-	65	39.370	ENSACLG00000019919	-	81	39.370	Astatotilapia_calliptera
ENSXETG00000034004	-	97	35.294	ENSACLG00000024271	-	53	35.294	Astatotilapia_calliptera
ENSXETG00000034004	-	77	39.597	ENSACLG00000011316	-	71	39.597	Astatotilapia_calliptera
ENSXETG00000034004	-	77	39.597	ENSACLG00000015881	-	72	39.597	Astatotilapia_calliptera
ENSXETG00000034004	-	96	32.787	ENSAMXG00000035044	-	51	32.787	Astyanax_mexicanus
ENSXETG00000034004	-	83	32.500	ENSAMXG00000035711	-	79	32.500	Astyanax_mexicanus
ENSXETG00000034004	-	92	33.333	ENSAMXG00000033087	-	54	33.333	Astyanax_mexicanus
ENSXETG00000034004	-	96	30.601	ENSAMXG00000037658	-	54	30.601	Astyanax_mexicanus
ENSXETG00000034004	-	100	40.838	ENSCAFG00000025206	ZCCHC3	68	40.838	Canis_familiaris
ENSXETG00000034004	-	100	40.838	ENSCANG00000010812	ZCCHC3	69	40.838	Colobus_angolensis_palliatus
ENSXETG00000034004	-	100	41.361	ENSCGRG00001011895	-	53	41.361	Cricetulus_griseus_chok1gshd
ENSXETG00000034004	-	100	41.361	ENSCGRG00000008273	-	53	41.361	Cricetulus_griseus_crigri
ENSXETG00000034004	-	81	40.000	ENSELUG00000002602	-	82	40.000	Esox_lucius
ENSXETG00000034004	-	92	40.341	ENSELUG00000017799	-	57	40.341	Esox_lucius
ENSXETG00000034004	-	77	32.215	ENSGACG00000000773	-	86	32.215	Gasterosteus_aculeatus
ENSXETG00000034004	-	77	31.544	ENSGACG00000018075	-	88	31.544	Gasterosteus_aculeatus
ENSXETG00000034004	-	100	40.838	ENSGGOG00000044213	ZCCHC3	58	40.838	Gorilla_gorilla
ENSXETG00000034004	-	77	36.913	ENSHBUG00000001589	-	77	36.913	Haplochromis_burtoni
ENSXETG00000034004	-	81	31.818	ENSHBUG00000005879	-	56	31.818	Haplochromis_burtoni
ENSXETG00000034004	-	83	39.241	ENSHBUG00000011697	-	72	39.241	Haplochromis_burtoni
ENSXETG00000034004	-	100	37.173	ENSHGLG00100009699	ZCCHC3	54	37.173	Heterocephalus_glaber_male
ENSXETG00000034004	-	98	40.860	ENSLACG00000000032	-	53	40.860	Latimeria_chalumnae
ENSXETG00000034004	-	93	44.886	ENSLACG00000003328	-	63	44.886	Latimeria_chalumnae
ENSXETG00000034004	-	97	40.541	ENSLACG00000002864	-	63	40.541	Latimeria_chalumnae
ENSXETG00000034004	-	88	44.311	ENSLACG00000012216	-	54	44.311	Latimeria_chalumnae
ENSXETG00000034004	-	97	40.000	ENSLACG00000012103	-	55	40.000	Latimeria_chalumnae
ENSXETG00000034004	-	97	41.081	ENSLACG00000002300	-	56	41.081	Latimeria_chalumnae
ENSXETG00000034004	-	69	41.732	ENSLOCG00000000602	-	87	41.732	Lepisosteus_oculatus
ENSXETG00000034004	-	92	36.552	ENSLOCG00000000632	-	94	36.552	Lepisosteus_oculatus
ENSXETG00000034004	-	86	32.335	ENSLOCG00000017303	-	88	32.335	Lepisosteus_oculatus
ENSXETG00000034004	-	86	33.136	ENSLOCG00000017302	-	97	33.136	Lepisosteus_oculatus
ENSXETG00000034004	-	70	34.483	ENSLOCG00000017305	-	94	34.483	Lepisosteus_oculatus
ENSXETG00000034004	-	85	33.939	ENSLOCG00000017974	-	83	33.939	Lepisosteus_oculatus
ENSXETG00000034004	-	66	34.109	ENSLOCG00000002624	-	73	34.109	Lepisosteus_oculatus
ENSXETG00000034004	-	77	32.886	ENSLOCG00000017867	-	86	32.886	Lepisosteus_oculatus
ENSXETG00000034004	-	84	30.864	ENSLOCG00000018075	-	83	30.864	Lepisosteus_oculatus
ENSXETG00000034004	-	81	33.121	ENSLOCG00000000361	-	90	37.069	Lepisosteus_oculatus
ENSXETG00000034004	-	87	34.320	ENSLOCG00000017670	-	93	34.320	Lepisosteus_oculatus
ENSXETG00000034004	-	91	31.250	ENSLOCG00000017623	-	71	31.250	Lepisosteus_oculatus
ENSXETG00000034004	-	79	31.373	ENSLOCG00000017694	-	88	31.373	Lepisosteus_oculatus
ENSXETG00000034004	-	78	31.250	ENSLOCG00000012680	-	92	31.250	Lepisosteus_oculatus
ENSXETG00000034004	-	71	36.957	ENSLOCG00000008338	-	85	36.957	Lepisosteus_oculatus
ENSXETG00000034004	-	66	36.719	ENSLOCG00000017641	-	90	36.719	Lepisosteus_oculatus
ENSXETG00000034004	-	79	31.818	ENSLOCG00000018355	-	90	31.818	Lepisosteus_oculatus
ENSXETG00000034004	-	79	31.818	ENSLOCG00000017530	-	90	31.818	Lepisosteus_oculatus
ENSXETG00000034004	-	88	31.953	ENSLOCG00000000320	-	94	31.953	Lepisosteus_oculatus
ENSXETG00000034004	-	67	37.692	ENSLOCG00000017824	-	93	37.692	Lepisosteus_oculatus
ENSXETG00000034004	-	88	30.409	ENSLOCG00000006695	-	98	30.409	Lepisosteus_oculatus
ENSXETG00000034004	-	76	34.014	ENSLOCG00000010606	-	100	34.014	Lepisosteus_oculatus
ENSXETG00000034004	-	78	33.775	ENSLOCG00000017501	-	92	33.775	Lepisosteus_oculatus
ENSXETG00000034004	-	88	34.503	ENSLOCG00000017639	-	94	34.503	Lepisosteus_oculatus
ENSXETG00000034004	-	76	34.459	ENSLOCG00000017328	-	87	34.459	Lepisosteus_oculatus
ENSXETG00000034004	-	74	35.172	ENSLOCG00000017327	-	98	35.172	Lepisosteus_oculatus
ENSXETG00000034004	-	80	33.333	ENSLOCG00000000297	-	91	33.333	Lepisosteus_oculatus
ENSXETG00000034004	-	86	33.533	ENSLOCG00000017503	-	93	33.533	Lepisosteus_oculatus
ENSXETG00000034004	-	100	40.838	ENSLAFG00000030593	ZCCHC3	70	40.838	Loxodonta_africana
ENSXETG00000034004	-	97	35.294	ENSMZEG00005000499	-	53	35.294	Maylandia_zebra
ENSXETG00000034004	-	77	39.597	ENSMZEG00005028553	-	72	39.597	Maylandia_zebra
ENSXETG00000034004	-	87	37.278	ENSMZEG00005028130	-	75	37.278	Maylandia_zebra
ENSXETG00000034004	-	64	44.595	ENSMZEG00005028547	-	92	44.595	Maylandia_zebra
ENSXETG00000034004	-	78	33.113	ENSNBRG00000024092	-	76	33.113	Neolamprologus_brichardi
ENSXETG00000034004	-	100	40.838	ENSOCUG00000017024	ZCCHC3	51	40.838	Oryctolagus_cuniculus
ENSXETG00000034004	-	100	40.838	ENSOARG00000019161	ZCCHC3	66	40.838	Ovis_aries
ENSXETG00000034004	-	100	40.838	ENSPPAG00000010453	-	72	40.838	Pan_paniscus
ENSXETG00000034004	-	100	37.173	ENSPTIG00000009393	ZCCHC3	76	37.173	Panthera_tigris_altaica
ENSXETG00000034004	-	79	30.519	ENSPKIG00000015947	-	68	30.519	Paramormyrops_kingsleyae
ENSXETG00000034004	-	68	36.923	ENSPNYG00000015964	-	68	36.923	Pundamilia_nyererei
ENSXETG00000034004	-	81	32.075	ENSPNYG00000002656	-	88	32.692	Pundamilia_nyererei
ENSXETG00000034004	-	53	34.951	ENSPNAG00000007153	-	54	34.951	Pygocentrus_nattereri
ENSXETG00000034004	-	78	30.000	ENSPNAG00000004865	-	78	30.000	Pygocentrus_nattereri
ENSXETG00000034004	-	83	30.435	ENSPNAG00000010555	-	90	30.435	Pygocentrus_nattereri
ENSXETG00000034004	-	77	30.667	ENSSFOG00015012405	-	77	30.667	Scleropages_formosus
ENSXETG00000034004	-	100	40.314	ENSVPAG00000011267	-	78	40.314	Vicugna_pacos