EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000034066 (Gene tree)
Gene ID: -
Gene Symbol: synj2
Alias: -
Full Name: Xenopus tropicalis synaptojanin 2 (synj2)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 64642 bases
Position: chrGL172638.1:4647909-4712550
Accession: NM_001142039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000021807	Exo_endo_phos	PF03372.23	3.1e-14	1	1
ENSXETP00000021807	DUF1866	PF08952.11	2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000021808	-	5421	-	ENSXETP00000021807	1551 (aa)	-	F6ZWS4

Gene Model

Click here to download ENSXETG00000034066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000034066's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000034066	synj2	66	53.964	ENSXETG00000009899	synj1	68	52.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000034066	synj2	81	69.737	ENSG00000078269	SYNJ2	99	73.333	Homo_sapiens
ENSXETG00000034066	synj2	79	65.446	ENSAMEG00000009581	SYNJ2	89	65.207	Ailuropoda_melanoleuca
ENSXETG00000034066	synj2	94	64.743	ENSAPLG00000002563	SYNJ2	94	64.673	Anas_platyrhynchos
ENSXETG00000034066	synj2	87	67.764	ENSACAG00000004945	SYNJ2	90	67.917	Anolis_carolinensis
ENSXETG00000034066	synj2	88	63.643	ENSANAG00000026575	SYNJ2	97	67.701	Aotus_nancymaae
ENSXETG00000034066	synj2	86	66.178	ENSBTAG00000000817	SYNJ2	91	65.869	Bos_taurus
ENSXETG00000034066	synj2	89	64.000	ENSCJAG00000003570	SYNJ2	97	67.994	Callithrix_jacchus
ENSXETG00000034066	synj2	80	66.296	ENSCAFG00000000644	SYNJ2	90	65.873	Canis_familiaris
ENSXETG00000034066	synj2	82	65.675	ENSCAFG00020015809	SYNJ2	95	65.126	Canis_lupus_dingo
ENSXETG00000034066	synj2	87	64.844	ENSCHIG00000011077	SYNJ2	91	63.997	Capra_hircus
ENSXETG00000034066	synj2	89	66.148	ENSTSYG00000014342	SYNJ2	93	68.595	Carlito_syrichta
ENSXETG00000034066	synj2	82	65.514	ENSCAPG00000000287	SYNJ2	96	65.043	Cavia_aperea
ENSXETG00000034066	synj2	86	67.857	ENSCPOG00000009144	SYNJ2	95	75.847	Cavia_porcellus
ENSXETG00000034066	synj2	80	70.805	ENSCCAG00000025484	SYNJ2	97	68.182	Cebus_capucinus
ENSXETG00000034066	synj2	81	69.490	ENSCATG00000042943	SYNJ2	97	68.022	Cercocebus_atys
ENSXETG00000034066	synj2	88	65.541	ENSCLAG00000004730	SYNJ2	90	75.847	Chinchilla_lanigera
ENSXETG00000034066	synj2	81	69.490	ENSCSAG00000013130	SYNJ2	91	66.411	Chlorocebus_sabaeus
ENSXETG00000034066	synj2	83	69.382	ENSCPBG00000016273	SYNJ2	86	69.306	Chrysemys_picta_bellii
ENSXETG00000034066	synj2	79	69.550	ENSCANG00000040349	SYNJ2	97	68.036	Colobus_angolensis_palliatus
ENSXETG00000034066	synj2	89	66.058	ENSCGRG00001004257	Synj2	98	66.586	Cricetulus_griseus_chok1gshd
ENSXETG00000034066	synj2	86	66.219	ENSCGRG00000001656	Synj2	98	66.586	Cricetulus_griseus_crigri
ENSXETG00000034066	synj2	85	59.274	ENSDNOG00000015900	SYNJ2	96	62.565	Dasypus_novemcinctus
ENSXETG00000034066	synj2	86	64.431	ENSDORG00000014128	Synj2	88	64.275	Dipodomys_ordii
ENSXETG00000034066	synj2	61	72.563	ENSETEG00000017418	SYNJ2	73	72.563	Echinops_telfairi
ENSXETG00000034066	synj2	80	67.008	ENSEASG00005018902	SYNJ2	90	65.794	Equus_asinus_asinus
ENSXETG00000034066	synj2	80	66.983	ENSECAG00000012646	SYNJ2	85	65.714	Equus_caballus
ENSXETG00000034066	synj2	80	67.965	ENSFCAG00000010854	SYNJ2	97	67.598	Felis_catus
ENSXETG00000034066	synj2	78	71.954	ENSFALG00000012593	SYNJ2	89	68.320	Ficedula_albicollis
ENSXETG00000034066	synj2	82	65.234	ENSFDAG00000016352	SYNJ2	99	66.926	Fukomys_damarensis
ENSXETG00000034066	synj2	85	71.907	ENSGALG00000013727	SYNJ2	88	71.668	Gallus_gallus
ENSXETG00000034066	synj2	87	69.545	ENSGAGG00000009857	SYNJ2	89	69.545	Gopherus_agassizii
ENSXETG00000034066	synj2	81	69.819	ENSGGOG00000012210	SYNJ2	97	68.341	Gorilla_gorilla
ENSXETG00000034066	synj2	86	67.778	ENSHGLG00000007534	SYNJ2	96	66.753	Heterocephalus_glaber_female
ENSXETG00000034066	synj2	85	68.171	ENSHGLG00100009973	SYNJ2	96	67.521	Heterocephalus_glaber_male
ENSXETG00000034066	synj2	88	63.444	ENSSTOG00000016474	SYNJ2	94	64.880	Ictidomys_tridecemlineatus
ENSXETG00000034066	synj2	80	66.508	ENSJJAG00000014436	Synj2	96	66.956	Jaculus_jaculus
ENSXETG00000034066	synj2	68	68.891	ENSLACG00000007316	SYNJ2	99	69.079	Latimeria_chalumnae
ENSXETG00000034066	synj2	80	73.529	ENSLAFG00000011979	SYNJ2	91	65.105	Loxodonta_africana
ENSXETG00000034066	synj2	75	74.965	ENSMFAG00000040552	SYNJ2	96	74.965	Macaca_fascicularis
ENSXETG00000034066	synj2	61	68.718	ENSMMUG00000007153	SYNJ2	96	66.930	Macaca_mulatta
ENSXETG00000034066	synj2	85	69.408	ENSMNEG00000017211	SYNJ2	97	67.943	Macaca_nemestrina
ENSXETG00000034066	synj2	82	66.092	ENSMLEG00000024911	SYNJ2	90	63.344	Mandrillus_leucophaeus
ENSXETG00000034066	synj2	85	68.896	ENSMGAG00000012839	SYNJ2	98	68.740	Meleagris_gallopavo
ENSXETG00000034066	synj2	88	65.402	ENSMAUG00000022212	Synj2	90	76.059	Mesocricetus_auratus
ENSXETG00000034066	synj2	78	68.456	ENSMICG00000015804	SYNJ2	97	65.871	Microcebus_murinus
ENSXETG00000034066	synj2	88	66.181	ENSMOCG00000020054	Synj2	91	75.847	Microtus_ochrogaster
ENSXETG00000034066	synj2	87	69.201	ENSMODG00000007783	SYNJ2	91	68.971	Monodelphis_domestica
ENSXETG00000034066	synj2	86	65.268	MGP_CAROLIEiJ_G0021026	Synj2	100	75.378	Mus_caroli
ENSXETG00000034066	synj2	84	65.875	ENSMUSG00000023805	Synj2	100	75.378	Mus_musculus
ENSXETG00000034066	synj2	80	69.024	MGP_PahariEiJ_G0023344	Synj2	100	75.378	Mus_pahari
ENSXETG00000034066	synj2	84	65.794	MGP_SPRETEiJ_G0021931	Synj2	100	74.924	Mus_spretus
ENSXETG00000034066	synj2	81	63.735	ENSMPUG00000005323	SYNJ2	96	63.552	Mustela_putorius_furo
ENSXETG00000034066	synj2	80	63.203	ENSMLUG00000000324	SYNJ2	91	62.392	Myotis_lucifugus
ENSXETG00000034066	synj2	82	67.328	ENSNGAG00000014859	Synj2	92	76.695	Nannospalax_galili
ENSXETG00000034066	synj2	79	69.082	ENSNLEG00000010750	SYNJ2	97	66.374	Nomascus_leucogenys
ENSXETG00000034066	synj2	77	74.601	ENSMEUG00000003493	SYNJ2	82	74.601	Notamacropus_eugenii
ENSXETG00000034066	synj2	82	66.084	ENSOPRG00000009648	SYNJ2	84	66.084	Ochotona_princeps
ENSXETG00000034066	synj2	87	66.084	ENSODEG00000007709	SYNJ2	94	76.483	Octodon_degus
ENSXETG00000034066	synj2	78	68.116	ENSOCUG00000004762	SYNJ2	91	64.846	Oryctolagus_cuniculus
ENSXETG00000034066	synj2	73	70.982	ENSOGAG00000000488	SYNJ2	100	70.982	Otolemur_garnettii
ENSXETG00000034066	synj2	84	66.056	ENSOARG00000004304	SYNJ2	93	65.737	Ovis_aries
ENSXETG00000034066	synj2	80	70.250	ENSPPAG00000028831	SYNJ2	89	67.236	Pan_paniscus
ENSXETG00000034066	synj2	84	67.965	ENSPPRG00000009068	SYNJ2	97	67.598	Panthera_pardus
ENSXETG00000034066	synj2	81	67.901	ENSPTIG00000018780	SYNJ2	93	67.190	Panthera_tigris_altaica
ENSXETG00000034066	synj2	81	69.819	ENSPTRG00000018739	SYNJ2	99	68.341	Pan_troglodytes
ENSXETG00000034066	synj2	81	69.490	ENSPANG00000010755	SYNJ2	97	68.022	Papio_anubis
ENSXETG00000034066	synj2	85	69.328	ENSPSIG00000014659	SYNJ2	92	69.328	Pelodiscus_sinensis
ENSXETG00000034066	synj2	88	62.463	ENSPEMG00000006247	Synj2	91	75.636	Peromyscus_maniculatus_bairdii
ENSXETG00000034066	synj2	90	68.477	ENSPCIG00000010179	SYNJ2	90	68.250	Phascolarctos_cinereus
ENSXETG00000034066	synj2	85	69.819	ENSPPYG00000017130	SYNJ2	95	66.871	Pongo_abelii
ENSXETG00000034066	synj2	67	68.222	ENSPCAG00000009217	SYNJ2	70	68.337	Procavia_capensis
ENSXETG00000034066	synj2	82	67.060	ENSPCOG00000026910	SYNJ2	97	67.542	Propithecus_coquereli
ENSXETG00000034066	synj2	75	67.845	ENSPVAG00000006131	SYNJ2	91	61.250	Pteropus_vampyrus
ENSXETG00000034066	synj2	79	78.788	ENSRNOG00000017114	Synj2	96	65.517	Rattus_norvegicus
ENSXETG00000034066	synj2	79	70.929	ENSRBIG00000044126	SYNJ2	96	66.448	Rhinopithecus_bieti
ENSXETG00000034066	synj2	81	69.408	ENSRROG00000027755	SYNJ2	97	67.943	Rhinopithecus_roxellana
ENSXETG00000034066	synj2	90	63.297	ENSSBOG00000034876	SYNJ2	97	67.863	Saimiri_boliviensis_boliviensis
ENSXETG00000034066	synj2	85	69.031	ENSSHAG00000018881	SYNJ2	90	68.794	Sarcophilus_harrisii
ENSXETG00000034066	synj2	87	69.683	ENSSPUG00000000491	SYNJ2	92	75.383	Sphenodon_punctatus
ENSXETG00000034066	synj2	79	67.806	ENSSSCG00000012315	SYNJ2	97	67.544	Sus_scrofa
ENSXETG00000034066	synj2	81	69.845	ENSTGUG00000011082	SYNJ2	98	69.347	Taeniopygia_guttata
ENSXETG00000034066	synj2	69	67.365	ENSTBEG00000015827	SYNJ2	75	67.365	Tupaia_belangeri
ENSXETG00000034066	synj2	83	73.806	ENSTTRG00000009677	SYNJ2	90	60.413	Tursiops_truncatus
ENSXETG00000034066	synj2	64	62.262	ENSUMAG00000012826	SYNJ2	96	62.062	Ursus_maritimus
ENSXETG00000034066	synj2	58	64.407	ENSVVUG00000007407	SYNJ2	74	71.965	Vulpes_vulpes