EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000034336 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 5336 bases
Position: chrGL172908.1:729404-734739
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000061048	RVT_1	PF00078.27	5.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000062384	-	2217	-	ENSXETP00000061048	738 (aa)	-	F6YLL4

Gene Model

Click here to download ENSXETG00000034336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000034336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000034336	-	90	47.059	ENSXETG00000031094	-	54	47.059
ENSXETG00000034336	-	98	33.690	ENSXETG00000033627	-	54	33.690
ENSXETG00000034336	-	91	52.535	ENSXETG00000031887	-	52	52.535
ENSXETG00000034336	-	88	50.287	ENSXETG00000031859	-	66	50.287
ENSXETG00000034336	-	85	44.242	ENSXETG00000032308	-	72	44.242
ENSXETG00000034336	-	67	31.661	ENSXETG00000032833	-	78	31.661
ENSXETG00000034336	-	80	35.211	ENSXETG00000034134	-	83	35.211
ENSXETG00000034336	-	75	37.500	ENSXETG00000030860	-	72	37.500
ENSXETG00000034336	-	80	43.182	ENSXETG00000034016	-	67	43.182
ENSXETG00000034336	-	92	88.889	ENSXETG00000030359	-	53	88.889
ENSXETG00000034336	-	96	54.412	ENSXETG00000033831	-	78	54.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000034336	-	74	34.060	ENSAPEG00000013789	-	79	34.060	Amphiprion_percula
ENSXETG00000034336	-	52	33.255	ENSAPEG00000021324	-	99	33.255	Amphiprion_percula
ENSXETG00000034336	-	54	35.388	ENSACLG00000019432	-	96	35.388	Astatotilapia_calliptera
ENSXETG00000034336	-	60	33.264	ENSCVAG00000009961	-	94	33.264	Cyprinodon_variegatus
ENSXETG00000034336	-	89	30.345	ENSDARG00000099418	CABZ01030017.1	66	30.345	Danio_rerio
ENSXETG00000034336	-	55	34.318	ENSFHEG00000014931	-	77	34.318	Fundulus_heteroclitus
ENSXETG00000034336	-	64	34.510	ENSKMAG00000020777	-	58	34.510	Kryptolebias_marmoratus
ENSXETG00000034336	-	80	33.385	ENSKMAG00000020455	-	50	33.385	Kryptolebias_marmoratus
ENSXETG00000034336	-	50	34.527	ENSLBEG00000015833	-	99	34.527	Labrus_bergylta
ENSXETG00000034336	-	57	36.957	ENSORLG00000022016	-	84	36.957	Oryzias_latipes
ENSXETG00000034336	-	51	37.170	ENSORLG00020017190	-	96	37.170	Oryzias_latipes_hni
ENSXETG00000034336	-	70	31.362	ENSORLG00020005447	-	96	31.362	Oryzias_latipes_hni
ENSXETG00000034336	-	54	33.105	ENSPKIG00000025567	-	98	33.105	Paramormyrops_kingsleyae
ENSXETG00000034336	-	53	32.401	ENSPKIG00000013191	-	91	32.401	Paramormyrops_kingsleyae
ENSXETG00000034336	-	51	31.311	ENSPFOG00000024165	-	95	31.311	Poecilia_formosa
ENSXETG00000034336	-	56	31.724	ENSPFOG00000024190	-	98	31.724	Poecilia_formosa
ENSXETG00000034336	-	52	36.215	ENSPNYG00000005142	-	90	36.215	Pundamilia_nyererei
ENSXETG00000034336	-	88	33.571	ENSXMAG00000028904	-	67	33.571	Xiphophorus_maculatus