EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000000261 (Gene tree)
Gene ID: 102218650
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 16562 bases
Position: chr18:23724236-23740797
Accession: 102218650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000000265	GTP_EFTU	PF00009.27	5.2e-63	1	1
ENSXMAP00000000265	GTP_EFTU_D2	PF03144.25	3.5e-17	1	1
ENSXMAP00000000265	EFG_IV	PF03764.18	4.8e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000000267	-	4503	XM_005814173	ENSXMAP00000000265	748 (aa)	XP_005814230	M3ZDH3

Gene Model

Click here to download ENSXMAG00000000261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000000261's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000000261	gfm1	98	80.952	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSXMAG00000000261	gfm1	93	88.682	ENSAPOG00000016489	gfm1	99	88.682	Acanthochromis_polyacanthus
ENSXMAG00000000261	gfm1	97	82.231	ENSAMEG00000013542	GFM1	96	82.231	Ailuropoda_melanoleuca
ENSXMAG00000000261	gfm1	97	86.759	ENSACIG00000014465	gfm1	94	86.759	Amphilophus_citrinellus
ENSXMAG00000000261	gfm1	100	89.305	ENSAOCG00000006023	gfm1	100	89.305	Amphiprion_ocellaris
ENSXMAG00000000261	gfm1	100	89.171	ENSAPEG00000024499	gfm1	100	89.171	Amphiprion_percula
ENSXMAG00000000261	gfm1	100	90.508	ENSATEG00000013789	gfm1	100	90.508	Anabas_testudineus
ENSXMAG00000000261	gfm1	97	80.414	ENSAPLG00000005022	GFM1	100	80.414	Anas_platyrhynchos
ENSXMAG00000000261	gfm1	97	80.828	ENSACAG00000006829	GFM1	98	80.828	Anolis_carolinensis
ENSXMAG00000000261	gfm1	100	79.361	ENSANAG00000035983	GFM1	100	79.361	Aotus_nancymaae
ENSXMAG00000000261	gfm1	100	91.043	ENSACLG00000016586	gfm1	100	91.043	Astatotilapia_calliptera
ENSXMAG00000000261	gfm1	100	86.230	ENSAMXG00000013435	gfm1	98	87.278	Astyanax_mexicanus
ENSXMAG00000000261	gfm1	96	82.033	ENSBTAG00000027795	GFM1	95	82.033	Bos_taurus
ENSXMAG00000000261	gfm1	94	57.489	WBGene00009246	gfm-1	95	57.163	Caenorhabditis_elegans
ENSXMAG00000000261	gfm1	97	81.405	ENSCJAG00000000363	GFM1	97	81.405	Callithrix_jacchus
ENSXMAG00000000261	gfm1	98	81.199	ENSCAFG00000009006	GFM1	100	82.101	Canis_familiaris
ENSXMAG00000000261	gfm1	98	81.088	ENSCAFG00020005878	GFM1	98	82.591	Canis_lupus_dingo
ENSXMAG00000000261	gfm1	96	82.173	ENSCHIG00000015220	GFM1	95	82.173	Capra_hircus
ENSXMAG00000000261	gfm1	100	79.681	ENSTSYG00000002013	GFM1	100	79.681	Carlito_syrichta
ENSXMAG00000000261	gfm1	99	70.241	ENSCAPG00000005699	GFM1	99	70.241	Cavia_aperea
ENSXMAG00000000261	gfm1	100	79.310	ENSCPOG00000001194	GFM1	100	79.310	Cavia_porcellus
ENSXMAG00000000261	gfm1	97	81.129	ENSCCAG00000025561	GFM1	97	81.129	Cebus_capucinus
ENSXMAG00000000261	gfm1	100	79.627	ENSCATG00000037622	GFM1	100	79.627	Cercocebus_atys
ENSXMAG00000000261	gfm1	97	81.129	ENSCLAG00000002503	GFM1	96	81.129	Chinchilla_lanigera
ENSXMAG00000000261	gfm1	100	79.760	ENSCSAG00000012162	GFM1	100	79.760	Chlorocebus_sabaeus
ENSXMAG00000000261	gfm1	100	70.822	ENSCHOG00000004867	GFM1	100	70.822	Choloepus_hoffmanni
ENSXMAG00000000261	gfm1	100	80.107	ENSCPBG00000018367	GFM1	99	80.107	Chrysemys_picta_bellii
ENSXMAG00000000261	gfm1	94	58.462	ENSCING00000011960	-	93	58.462	Ciona_intestinalis
ENSXMAG00000000261	gfm1	95	59.028	ENSCSAVG00000008514	-	99	59.028	Ciona_savignyi
ENSXMAG00000000261	gfm1	98	80.680	ENSCANG00000031714	GFM1	100	79.494	Colobus_angolensis_palliatus
ENSXMAG00000000261	gfm1	100	79.494	ENSCGRG00001022095	GFM1	100	79.494	Cricetulus_griseus_chok1gshd
ENSXMAG00000000261	gfm1	100	79.494	ENSCGRG00000012043	GFM1	100	79.494	Cricetulus_griseus_crigri
ENSXMAG00000000261	gfm1	97	83.402	ENSCSEG00000017088	gfm1	99	83.402	Cynoglossus_semilaevis
ENSXMAG00000000261	gfm1	100	94.786	ENSCVAG00000004126	gfm1	100	94.786	Cyprinodon_variegatus
ENSXMAG00000000261	gfm1	100	83.957	ENSDARG00000063624	gfm1	100	83.957	Danio_rerio
ENSXMAG00000000261	gfm1	55	79.951	ENSDNOG00000016385	-	100	79.951	Dasypus_novemcinctus
ENSXMAG00000000261	gfm1	100	78.353	ENSDORG00000014165	Gfm1	100	78.353	Dipodomys_ordii
ENSXMAG00000000261	gfm1	95	68.265	FBgn0263133	mEFG1	95	68.265	Drosophila_melanogaster
ENSXMAG00000000261	gfm1	96	73.509	ENSETEG00000019197	GFM1	95	73.509	Echinops_telfairi
ENSXMAG00000000261	gfm1	90	62.760	ENSEBUG00000012794	gfm1	99	62.760	Eptatretus_burgeri
ENSXMAG00000000261	gfm1	96	60.972	ENSEEUG00000000429	GFM1	99	60.972	Erinaceus_europaeus
ENSXMAG00000000261	gfm1	100	86.497	ENSELUG00000014728	gfm1	100	86.497	Esox_lucius
ENSXMAG00000000261	gfm1	97	81.680	ENSFCAG00000013291	GFM1	100	79.841	Felis_catus
ENSXMAG00000000261	gfm1	90	80.593	ENSFALG00000007619	GFM1	100	80.593	Ficedula_albicollis
ENSXMAG00000000261	gfm1	100	78.515	ENSFDAG00000016559	GFM1	100	78.515	Fukomys_damarensis
ENSXMAG00000000261	gfm1	100	95.053	ENSFHEG00000006091	gfm1	100	95.053	Fundulus_heteroclitus
ENSXMAG00000000261	gfm1	97	87.620	ENSGMOG00000010161	gfm1	100	87.620	Gadus_morhua
ENSXMAG00000000261	gfm1	97	80.552	ENSGALG00000009634	GFM1	98	80.552	Gallus_gallus
ENSXMAG00000000261	gfm1	100	97.861	ENSGAFG00000012527	gfm1	100	97.861	Gambusia_affinis
ENSXMAG00000000261	gfm1	99	90.374	ENSGACG00000009864	gfm1	99	90.374	Gasterosteus_aculeatus
ENSXMAG00000000261	gfm1	98	80.952	ENSGGOG00000003085	GFM1	100	79.760	Gorilla_gorilla
ENSXMAG00000000261	gfm1	100	91.176	ENSHBUG00000002120	gfm1	100	91.176	Haplochromis_burtoni
ENSXMAG00000000261	gfm1	97	80.441	ENSHGLG00000016855	GFM1	96	80.441	Heterocephalus_glaber_female
ENSXMAG00000000261	gfm1	97	80.441	ENSHGLG00100013049	GFM1	96	80.441	Heterocephalus_glaber_male
ENSXMAG00000000261	gfm1	100	89.572	ENSHCOG00000007638	gfm1	100	89.572	Hippocampus_comes
ENSXMAG00000000261	gfm1	100	87.166	ENSIPUG00000005873	gfm1	100	87.166	Ictalurus_punctatus
ENSXMAG00000000261	gfm1	97	80.028	ENSSTOG00000010150	GFM1	98	80.028	Ictidomys_tridecemlineatus
ENSXMAG00000000261	gfm1	100	79.228	ENSJJAG00000016447	Gfm1	100	79.228	Jaculus_jaculus
ENSXMAG00000000261	gfm1	100	88.636	ENSKMAG00000020768	gfm1	100	88.636	Kryptolebias_marmoratus
ENSXMAG00000000261	gfm1	94	91.155	ENSLBEG00000021315	gfm1	100	91.155	Labrus_bergylta
ENSXMAG00000000261	gfm1	100	81.551	ENSLACG00000012295	GFM1	100	81.551	Latimeria_chalumnae
ENSXMAG00000000261	gfm1	97	79.891	ENSLOCG00000003778	gfm1	100	79.891	Lepisosteus_oculatus
ENSXMAG00000000261	gfm1	99	78.133	ENSLAFG00000010945	GFM1	100	78.621	Loxodonta_africana
ENSXMAG00000000261	gfm1	100	79.494	ENSMFAG00000035731	GFM1	100	79.494	Macaca_fascicularis
ENSXMAG00000000261	gfm1	100	79.494	ENSMMUG00000004961	GFM1	100	79.494	Macaca_mulatta
ENSXMAG00000000261	gfm1	100	79.361	ENSMNEG00000033245	GFM1	100	79.361	Macaca_nemestrina
ENSXMAG00000000261	gfm1	97	79.862	ENSMLEG00000030908	GFM1	100	79.273	Mandrillus_leucophaeus
ENSXMAG00000000261	gfm1	100	90.107	ENSMAMG00000011760	gfm1	100	90.107	Mastacembelus_armatus
ENSXMAG00000000261	gfm1	100	91.176	ENSMZEG00005016639	gfm1	100	91.176	Maylandia_zebra
ENSXMAG00000000261	gfm1	97	80.525	ENSMGAG00000010641	GFM1	97	80.525	Meleagris_gallopavo
ENSXMAG00000000261	gfm1	100	79.627	ENSMAUG00000000611	Gfm1	100	79.627	Mesocricetus_auratus
ENSXMAG00000000261	gfm1	97	81.956	ENSMICG00000049086	GFM1	96	81.956	Microcebus_murinus
ENSXMAG00000000261	gfm1	100	79.760	ENSMOCG00000000465	Gfm1	100	79.760	Microtus_ochrogaster
ENSXMAG00000000261	gfm1	97	90.771	ENSMMOG00000012538	gfm1	98	90.771	Mola_mola
ENSXMAG00000000261	gfm1	99	78.812	ENSMODG00000015673	GFM1	99	78.812	Monodelphis_domestica
ENSXMAG00000000261	gfm1	96	88.145	ENSMALG00000012508	gfm1	95	88.145	Monopterus_albus
ENSXMAG00000000261	gfm1	100	79.760	MGP_CAROLIEiJ_G0025052	Gfm1	100	79.963	Mus_caroli
ENSXMAG00000000261	gfm1	100	79.494	ENSMUSG00000027774	Gfm1	100	79.494	Mus_musculus
ENSXMAG00000000261	gfm1	100	79.095	MGP_PahariEiJ_G0026495	Gfm1	100	79.588	Mus_pahari
ENSXMAG00000000261	gfm1	100	79.494	MGP_SPRETEiJ_G0025994	Gfm1	100	79.588	Mus_spretus
ENSXMAG00000000261	gfm1	97	82.231	ENSMPUG00000002859	GFM1	96	82.231	Mustela_putorius_furo
ENSXMAG00000000261	gfm1	97	81.818	ENSMLUG00000000452	GFM1	96	81.818	Myotis_lucifugus
ENSXMAG00000000261	gfm1	100	79.200	ENSNGAG00000012375	Gfm1	100	79.200	Nannospalax_galili
ENSXMAG00000000261	gfm1	97	91.484	ENSNBRG00000004631	gfm1	99	91.484	Neolamprologus_brichardi
ENSXMAG00000000261	gfm1	97	81.405	ENSNLEG00000004176	GFM1	100	79.627	Nomascus_leucogenys
ENSXMAG00000000261	gfm1	91	72.647	ENSMEUG00000007784	GFM1	99	72.647	Notamacropus_eugenii
ENSXMAG00000000261	gfm1	100	79.306	ENSOPRG00000009860	GFM1	100	79.306	Ochotona_princeps
ENSXMAG00000000261	gfm1	98	81.063	ENSODEG00000004316	GFM1	100	79.443	Octodon_degus
ENSXMAG00000000261	gfm1	100	91.578	ENSONIG00000003772	gfm1	100	91.578	Oreochromis_niloticus
ENSXMAG00000000261	gfm1	98	81.608	ENSOCUG00000013561	GFM1	100	80.504	Oryctolagus_cuniculus
ENSXMAG00000000261	gfm1	95	91.667	ENSORLG00000006487	gfm1	100	91.667	Oryzias_latipes
ENSXMAG00000000261	gfm1	100	91.176	ENSORLG00020003362	gfm1	100	91.176	Oryzias_latipes_hni
ENSXMAG00000000261	gfm1	100	90.642	ENSORLG00015005829	gfm1	100	90.642	Oryzias_latipes_hsok
ENSXMAG00000000261	gfm1	100	91.310	ENSOMEG00000012894	gfm1	100	91.310	Oryzias_melastigma
ENSXMAG00000000261	gfm1	97	81.129	ENSOGAG00000008298	GFM1	96	81.129	Otolemur_garnettii
ENSXMAG00000000261	gfm1	96	81.276	ENSOARG00000002409	GFM1	99	81.276	Ovis_aries
ENSXMAG00000000261	gfm1	98	80.952	ENSPPAG00000033881	GFM1	100	79.760	Pan_paniscus
ENSXMAG00000000261	gfm1	97	81.680	ENSPPRG00000009281	GFM1	100	79.841	Panthera_pardus
ENSXMAG00000000261	gfm1	97	81.543	ENSPTIG00000012416	GFM1	100	79.708	Panthera_tigris_altaica
ENSXMAG00000000261	gfm1	98	80.952	ENSPTRG00000015570	GFM1	100	79.760	Pan_troglodytes
ENSXMAG00000000261	gfm1	100	79.494	ENSPANG00000016512	GFM1	100	79.494	Papio_anubis
ENSXMAG00000000261	gfm1	100	83.690	ENSPKIG00000004876	gfm1	100	83.690	Paramormyrops_kingsleyae
ENSXMAG00000000261	gfm1	100	80.507	ENSPSIG00000012567	GFM1	99	80.507	Pelodiscus_sinensis
ENSXMAG00000000261	gfm1	97	86.759	ENSPMGG00000014068	gfm1	100	86.759	Periophthalmus_magnuspinnatus
ENSXMAG00000000261	gfm1	100	79.494	ENSPEMG00000008942	Gfm1	100	79.494	Peromyscus_maniculatus_bairdii
ENSXMAG00000000261	gfm1	86	78.450	ENSPCIG00000020195	GFM1	95	81.475	Phascolarctos_cinereus
ENSXMAG00000000261	gfm1	100	97.727	ENSPFOG00000011022	gfm1	100	97.727	Poecilia_formosa
ENSXMAG00000000261	gfm1	99	96.216	ENSPLAG00000019585	gfm1	100	97.051	Poecilia_latipinna
ENSXMAG00000000261	gfm1	100	97.594	ENSPMEG00000012376	gfm1	100	97.594	Poecilia_mexicana
ENSXMAG00000000261	gfm1	100	97.460	ENSPREG00000001332	gfm1	95	97.460	Poecilia_reticulata
ENSXMAG00000000261	gfm1	98	80.680	ENSPPYG00000014244	GFM1	100	79.494	Pongo_abelii
ENSXMAG00000000261	gfm1	94	79.516	ENSPCAG00000008934	GFM1	100	79.516	Procavia_capensis
ENSXMAG00000000261	gfm1	97	81.680	ENSPCOG00000022259	GFM1	96	81.680	Propithecus_coquereli
ENSXMAG00000000261	gfm1	97	80.992	ENSPVAG00000013605	GFM1	96	80.992	Pteropus_vampyrus
ENSXMAG00000000261	gfm1	100	90.909	ENSPNYG00000006037	gfm1	100	90.909	Pundamilia_nyererei
ENSXMAG00000000261	gfm1	100	86.631	ENSPNAG00000001237	gfm1	100	86.631	Pygocentrus_nattereri
ENSXMAG00000000261	gfm1	97	81.379	ENSRNOG00000012873	Gfm1	97	81.379	Rattus_norvegicus
ENSXMAG00000000261	gfm1	98	80.680	ENSRBIG00000031363	GFM1	100	79.494	Rhinopithecus_bieti
ENSXMAG00000000261	gfm1	98	80.816	ENSRROG00000031081	GFM1	100	79.627	Rhinopithecus_roxellana
ENSXMAG00000000261	gfm1	92	56.340	YLR069C	-	90	56.340	Saccharomyces_cerevisiae
ENSXMAG00000000261	gfm1	100	79.361	ENSSBOG00000023252	GFM1	100	79.361	Saimiri_boliviensis_boliviensis
ENSXMAG00000000261	gfm1	97	81.328	ENSSHAG00000017772	GFM1	97	81.103	Sarcophilus_harrisii
ENSXMAG00000000261	gfm1	100	84.246	ENSSFOG00015003117	gfm1	100	84.246	Scleropages_formosus
ENSXMAG00000000261	gfm1	100	88.904	ENSSMAG00000013221	gfm1	100	88.904	Scophthalmus_maximus
ENSXMAG00000000261	gfm1	100	90.642	ENSSDUG00000018665	gfm1	100	90.642	Seriola_dumerili
ENSXMAG00000000261	gfm1	100	90.508	ENSSLDG00000020606	gfm1	100	90.508	Seriola_lalandi_dorsalis
ENSXMAG00000000261	gfm1	99	77.267	ENSSPUG00000018686	GFM1	100	77.267	Sphenodon_punctatus
ENSXMAG00000000261	gfm1	100	92.246	ENSSPAG00000008800	gfm1	100	92.246	Stegastes_partitus
ENSXMAG00000000261	gfm1	96	81.476	ENSSSCG00000025651	GFM1	95	81.476	Sus_scrofa
ENSXMAG00000000261	gfm1	100	87.834	ENSTRUG00000009244	gfm1	100	87.834	Takifugu_rubripes
ENSXMAG00000000261	gfm1	100	90.508	ENSTNIG00000007729	gfm1	100	90.508	Tetraodon_nigroviridis
ENSXMAG00000000261	gfm1	90	73.185	ENSTBEG00000017404	GFM1	89	73.185	Tupaia_belangeri
ENSXMAG00000000261	gfm1	96	82.033	ENSTTRG00000001735	GFM1	95	82.033	Tursiops_truncatus
ENSXMAG00000000261	gfm1	97	82.094	ENSUAMG00000026381	GFM1	96	82.094	Ursus_americanus
ENSXMAG00000000261	gfm1	97	82.094	ENSUMAG00000011268	GFM1	96	82.094	Ursus_maritimus
ENSXMAG00000000261	gfm1	97	78.207	ENSVPAG00000009444	GFM1	96	78.207	Vicugna_pacos
ENSXMAG00000000261	gfm1	98	81.011	ENSVVUG00000020091	GFM1	100	81.805	Vulpes_vulpes
ENSXMAG00000000261	gfm1	100	80.319	ENSXETG00000032551	GFM1	100	80.319	Xenopus_tropicalis
ENSXMAG00000000261	gfm1	54	94.293	ENSXCOG00000012590	gfm1	93	94.293	Xiphophorus_couchianus