EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000000338 (Gene tree)
Gene ID: 102231080
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 11895 bases
Position: chr11:4618535-4630429
Accession: 102231080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000024128	RRM_5	PF13893.6	1.6e-10	1	2
ENSXMAP00000024128	RRM_5	PF13893.6	1.6e-10	2	2
ENSXMAP00000000336	RRM_5	PF13893.6	1.8e-10	1	2
ENSXMAP00000000336	RRM_5	PF13893.6	1.8e-10	2	2
ENSXMAP00000026642	RRM_5	PF13893.6	2.4e-10	1	2
ENSXMAP00000026642	RRM_5	PF13893.6	2.4e-10	2	2
ENSXMAP00000024128	RRM_1	PF00076.22	1.7e-32	1	2
ENSXMAP00000024128	RRM_1	PF00076.22	1.7e-32	2	2
ENSXMAP00000000336	RRM_1	PF00076.22	1.7e-32	1	2
ENSXMAP00000000336	RRM_1	PF00076.22	1.7e-32	2	2
ENSXMAP00000026642	RRM_1	PF00076.22	1.8e-32	1	2
ENSXMAP00000026642	RRM_1	PF00076.22	1.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000036535	-	3077	XM_023342511	ENSXMAP00000024128	534 (aa)	XP_023198279	-
ENSXMAT00000000338	-	1608	-	ENSXMAP00000000336	535 (aa)	-	M3ZDP4
ENSXMAT00000038184	-	5465	XM_014471379	ENSXMAP00000026642	548 (aa)	XP_014326865	UPI000C6E02B4

Gene Model

Click here to download ENSXMAG00000000338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000000338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000000338	-	99	86.618	ENSAPOG00000003380	-	99	86.076	Acanthochromis_polyacanthus
ENSXMAG00000000338	-	72	62.230	ENSAPOG00000021712	rbm14b	69	62.324	Acanthochromis_polyacanthus
ENSXMAG00000000338	-	68	62.324	ENSACIG00000000381	rbm14b	82	46.516	Amphilophus_citrinellus
ENSXMAG00000000338	-	99	85.636	ENSACIG00000021173	-	99	84.909	Amphilophus_citrinellus
ENSXMAG00000000338	-	100	85.895	ENSAOCG00000001659	-	100	85.714	Amphiprion_ocellaris
ENSXMAG00000000338	-	72	62.816	ENSAOCG00000008941	rbm14b	82	57.106	Amphiprion_ocellaris
ENSXMAG00000000338	-	72	62.816	ENSAPEG00000003161	rbm14b	82	56.266	Amphiprion_percula
ENSXMAG00000000338	-	99	86.909	ENSAPEG00000016988	-	100	85.348	Amphiprion_percula
ENSXMAG00000000338	-	99	84.428	ENSATEG00000009700	-	98	83.459	Anabas_testudineus
ENSXMAG00000000338	-	70	60.428	ENSATEG00000003034	rbm14b	78	58.690	Anabas_testudineus
ENSXMAG00000000338	-	68	62.324	ENSACLG00000014355	rbm14b	64	62.324	Astatotilapia_calliptera
ENSXMAG00000000338	-	100	86.667	ENSACLG00000009112	-	97	87.004	Astatotilapia_calliptera
ENSXMAG00000000338	-	68	62.637	ENSAMXG00000031225	rbm14b	67	62.271	Astyanax_mexicanus
ENSXMAG00000000338	-	74	59.850	ENSAMXG00000007233	rbm14a	83	60.150	Astyanax_mexicanus
ENSXMAG00000000338	-	75	52.596	ENSCSEG00000000357	rbm14b	82	52.232	Cynoglossus_semilaevis
ENSXMAG00000000338	-	100	82.374	ENSCSEG00000019690	-	100	82.194	Cynoglossus_semilaevis
ENSXMAG00000000338	-	100	93.103	ENSCVAG00000014858	-	100	92.377	Cyprinodon_variegatus
ENSXMAG00000000338	-	72	63.177	ENSCVAG00000013776	rbm14b	67	62.676	Cyprinodon_variegatus
ENSXMAG00000000338	-	74	59.391	ENSDARG00000012723	rbm14a	81	59.335	Danio_rerio
ENSXMAG00000000338	-	68	62.409	ENSDARG00000103834	rbm14b	64	62.774	Danio_rerio
ENSXMAG00000000338	-	88	55.578	ENSELUG00000023633	rbm14a	82	56.808	Esox_lucius
ENSXMAG00000000338	-	70	65.799	ENSELUG00000004690	rbm14b	79	63.194	Esox_lucius
ENSXMAG00000000338	-	98	91.651	ENSFHEG00000020913	-	100	92.030	Fundulus_heteroclitus
ENSXMAG00000000338	-	75	48.333	ENSFHEG00000021265	rbm14b	84	48.654	Fundulus_heteroclitus
ENSXMAG00000000338	-	71	78.215	ENSGMOG00000010840	-	79	76.738	Gadus_morhua
ENSXMAG00000000338	-	100	98.692	ENSGAFG00000004455	-	100	98.848	Gambusia_affinis
ENSXMAG00000000338	-	72	63.273	ENSGAFG00000001924	rbm14b	66	62.766	Gambusia_affinis
ENSXMAG00000000338	-	94	84.120	ENSGACG00000020440	-	100	83.262	Gasterosteus_aculeatus
ENSXMAG00000000338	-	68	62.324	ENSHBUG00000016754	rbm14b	64	62.324	Haplochromis_burtoni
ENSXMAG00000000338	-	100	86.667	ENSHBUG00000003665	-	99	86.431	Haplochromis_burtoni
ENSXMAG00000000338	-	77	53.162	ENSHCOG00000012571	rbm14b	99	66.667	Hippocampus_comes
ENSXMAG00000000338	-	95	73.978	ENSHCOG00000004071	-	76	82.456	Hippocampus_comes
ENSXMAG00000000338	-	65	62.271	ENSIPUG00000009089	rbm14b	86	48.523	Ictalurus_punctatus
ENSXMAG00000000338	-	74	55.742	ENSIPUG00000021256	rbm14a	84	55.904	Ictalurus_punctatus
ENSXMAG00000000338	-	97	85.385	ENSKMAG00000008514	-	99	84.586	Kryptolebias_marmoratus
ENSXMAG00000000338	-	72	63.273	ENSKMAG00000020444	rbm14b	66	62.766	Kryptolebias_marmoratus
ENSXMAG00000000338	-	53	63.043	ENSLBEG00000027934	rbm14b	61	62.324	Labrus_bergylta
ENSXMAG00000000338	-	100	82.852	ENSLBEG00000001217	-	100	82.852	Labrus_bergylta
ENSXMAG00000000338	-	100	82.883	ENSMAMG00000021313	-	100	82.703	Mastacembelus_armatus
ENSXMAG00000000338	-	70	62.007	ENSMAMG00000014394	rbm14b	79	47.951	Mastacembelus_armatus
ENSXMAG00000000338	-	100	86.667	ENSMZEG00005001201	-	100	87.004	Maylandia_zebra
ENSXMAG00000000338	-	68	62.324	ENSMZEG00005020834	rbm14b	65	62.324	Maylandia_zebra
ENSXMAG00000000338	-	68	57.394	ENSMMOG00000012912	rbm14b	69	57.394	Mola_mola
ENSXMAG00000000338	-	100	81.022	ENSMMOG00000014501	-	99	81.648	Mola_mola
ENSXMAG00000000338	-	70	57.937	ENSMALG00000015445	rbm14b	83	57.963	Monopterus_albus
ENSXMAG00000000338	-	99	86.257	ENSNBRG00000004960	-	99	85.870	Neolamprologus_brichardi
ENSXMAG00000000338	-	68	62.324	ENSNBRG00000003378	rbm14b	65	62.324	Neolamprologus_brichardi
ENSXMAG00000000338	-	70	60.428	ENSONIG00000013035	rbm14b	82	58.690	Oreochromis_niloticus
ENSXMAG00000000338	-	94	84.778	ENSONIG00000008557	-	95	84.322	Oreochromis_niloticus
ENSXMAG00000000338	-	73	48.729	ENSORLG00000008051	rbm14b	83	46.708	Oryzias_latipes
ENSXMAG00000000338	-	100	84.574	ENSORLG00000001900	-	100	83.588	Oryzias_latipes
ENSXMAG00000000338	-	73	46.570	ENSORLG00020005551	rbm14b	82	46.598	Oryzias_latipes_hni
ENSXMAG00000000338	-	100	84.574	ENSORLG00020019144	-	100	83.588	Oryzias_latipes_hni
ENSXMAG00000000338	-	73	47.246	ENSORLG00015022683	rbm14b	83	46.502	Oryzias_latipes_hsok
ENSXMAG00000000338	-	100	84.574	ENSORLG00015000082	-	100	84.029	Oryzias_latipes_hsok
ENSXMAG00000000338	-	80	86.787	ENSOMEG00000006508	-	96	92.667	Oryzias_melastigma
ENSXMAG00000000338	-	71	63.273	ENSOMEG00000000910	rbm14b	78	57.653	Oryzias_melastigma
ENSXMAG00000000338	-	73	50.655	ENSPKIG00000009078	rbm14b	85	50.108	Paramormyrops_kingsleyae
ENSXMAG00000000338	-	79	78.454	ENSPMGG00000018869	-	93	87.162	Periophthalmus_magnuspinnatus
ENSXMAG00000000338	-	68	62.105	ENSPMGG00000013064	rbm14b	66	62.590	Periophthalmus_magnuspinnatus
ENSXMAG00000000338	-	75	47.925	ENSPFOG00000003614	rbm14b	83	48.133	Poecilia_formosa
ENSXMAG00000000338	-	98	99.232	ENSPFOG00000004843	-	100	99.232	Poecilia_formosa
ENSXMAG00000000338	-	98	99.232	ENSPLAG00000017359	-	100	99.232	Poecilia_latipinna
ENSXMAG00000000338	-	72	63.273	ENSPLAG00000001395	rbm14b	83	47.412	Poecilia_latipinna
ENSXMAG00000000338	-	72	63.636	ENSPMEG00000012911	rbm14b	66	63.121	Poecilia_mexicana
ENSXMAG00000000338	-	100	99.270	ENSPMEG00000004894	-	100	99.270	Poecilia_mexicana
ENSXMAG00000000338	-	100	98.876	ENSPREG00000007274	-	100	99.040	Poecilia_reticulata
ENSXMAG00000000338	-	72	63.636	ENSPREG00000003013	rbm14b	66	63.869	Poecilia_reticulata
ENSXMAG00000000338	-	100	86.667	ENSPNYG00000015906	-	100	87.004	Pundamilia_nyererei
ENSXMAG00000000338	-	68	62.324	ENSPNYG00000023605	rbm14b	74	62.816	Pundamilia_nyererei
ENSXMAG00000000338	-	74	57.554	ENSPNAG00000012473	rbm14a	85	57.831	Pygocentrus_nattereri
ENSXMAG00000000338	-	68	62.637	ENSPNAG00000001977	rbm14b	83	48.211	Pygocentrus_nattereri
ENSXMAG00000000338	-	77	50.630	ENSSFOG00015023796	rbm14b	88	50.830	Scleropages_formosus
ENSXMAG00000000338	-	72	63.899	ENSSMAG00000004522	rbm14b	79	64.130	Scophthalmus_maximus
ENSXMAG00000000338	-	100	84.601	ENSSMAG00000002055	-	100	84.239	Scophthalmus_maximus
ENSXMAG00000000338	-	100	84.919	ENSSDUG00000020756	-	100	85.637	Seriola_dumerili
ENSXMAG00000000338	-	72	62.816	ENSSDUG00000007975	rbm14b	66	62.324	Seriola_dumerili
ENSXMAG00000000338	-	72	62.816	ENSSLDG00000006472	rbm14b	66	62.324	Seriola_lalandi_dorsalis
ENSXMAG00000000338	-	100	84.464	ENSSLDG00000006311	-	100	85.357	Seriola_lalandi_dorsalis
ENSXMAG00000000338	-	99	87.091	ENSSPAG00000010825	-	99	86.909	Stegastes_partitus
ENSXMAG00000000338	-	72	62.816	ENSSPAG00000004231	rbm14b	65	62.324	Stegastes_partitus
ENSXMAG00000000338	-	98	77.799	ENSTRUG00000009504	-	94	76.850	Takifugu_rubripes
ENSXMAG00000000338	-	72	62.319	ENSTRUG00000005716	rbm14b	65	62.319	Takifugu_rubripes
ENSXMAG00000000338	-	70	54.400	ENSTNIG00000006844	rbm14b	79	55.000	Tetraodon_nigroviridis
ENSXMAG00000000338	-	85	76.304	ENSTNIG00000000058	-	93	83.333	Tetraodon_nigroviridis
ENSXMAG00000000338	-	99	99.582	ENSXCOG00000006825	-	99	99.582	Xiphophorus_couchianus
ENSXMAG00000000338	-	72	63.273	ENSXMAG00000008390	rbm14b	66	62.766	Xiphophorus_maculatus