EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000000396 (Gene tree)
Gene ID: 102216586
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7057 bases
Position: chr11:23491523-23498579
Accession: 102216586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000000395	Nucleoplasmin	PF03066.15	1.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000000397	-	2687	XM_023341674	ENSXMAP00000000395	303 (aa)	XP_023197442	M3ZDV3

Gene Model

Click here to download ENSXMAG00000000396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000000396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000000396	npm1a	100	66.337	ENSAPOG00000002813	npm1a	100	66.667	Acanthochromis_polyacanthus
ENSXMAG00000000396	npm1a	94	69.123	ENSACIG00000014201	npm1a	100	69.123	Amphilophus_citrinellus
ENSXMAG00000000396	npm1a	89	60.741	ENSAOCG00000004978	npm1a	100	60.370	Amphiprion_ocellaris
ENSXMAG00000000396	npm1a	100	68.301	ENSAPEG00000008594	npm1a	100	69.281	Amphiprion_percula
ENSXMAG00000000396	npm1a	100	69.745	ENSATEG00000008885	npm1a	99	70.323	Anabas_testudineus
ENSXMAG00000000396	npm1a	95	64.706	ENSACLG00000008376	npm1a	95	64.483	Astatotilapia_calliptera
ENSXMAG00000000396	npm1a	99	49.333	ENSAMXG00000010155	npm1a	99	51.171	Astyanax_mexicanus
ENSXMAG00000000396	npm1a	100	53.795	ENSCSEG00000011165	npm1a	95	75.000	Cynoglossus_semilaevis
ENSXMAG00000000396	npm1a	100	72.607	ENSCVAG00000008960	npm1a	100	72.937	Cyprinodon_variegatus
ENSXMAG00000000396	npm1a	98	59.596	ENSDARG00000014329	npm1a	94	68.553	Danio_rerio
ENSXMAG00000000396	npm1a	94	34.985	ENSEBUG00000012753	npm1a	91	36.000	Eptatretus_burgeri
ENSXMAG00000000396	npm1a	100	63.072	ENSELUG00000013705	npm1a	100	64.379	Esox_lucius
ENSXMAG00000000396	npm1a	100	74.917	ENSFHEG00000012496	npm1a	100	74.917	Fundulus_heteroclitus
ENSXMAG00000000396	npm1a	100	87.500	ENSGAFG00000013059	npm1a	100	86.513	Gambusia_affinis
ENSXMAG00000000396	npm1a	99	65.232	ENSGACG00000020319	npm1a	99	64.238	Gasterosteus_aculeatus
ENSXMAG00000000396	npm1a	99	66.458	ENSHBUG00000000776	npm1a	100	66.144	Haplochromis_burtoni
ENSXMAG00000000396	npm1a	100	54.045	ENSHCOG00000001059	npm1a	99	54.072	Hippocampus_comes
ENSXMAG00000000396	npm1a	98	57.516	ENSIPUG00000019452	npm1	99	57.190	Ictalurus_punctatus
ENSXMAG00000000396	npm1a	100	71.947	ENSKMAG00000010709	npm1a	100	71.617	Kryptolebias_marmoratus
ENSXMAG00000000396	npm1a	100	67.974	ENSLBEG00000008793	npm1a	100	67.974	Labrus_bergylta
ENSXMAG00000000396	npm1a	85	52.555	ENSLOCG00000009683	npm1a	100	52.920	Lepisosteus_oculatus
ENSXMAG00000000396	npm1a	100	69.180	ENSMAMG00000009344	npm1a	83	68.852	Mastacembelus_armatus
ENSXMAG00000000396	npm1a	99	66.981	ENSMZEG00005013717	npm1a	100	66.981	Maylandia_zebra
ENSXMAG00000000396	npm1a	95	64.706	ENSMMOG00000007980	npm1a	100	64.360	Mola_mola
ENSXMAG00000000396	npm1a	100	70.915	ENSMALG00000001146	npm1a	100	70.915	Monopterus_albus
ENSXMAG00000000396	npm1a	99	62.733	ENSNBRG00000013172	npm1a	100	62.500	Neolamprologus_brichardi
ENSXMAG00000000396	npm1a	99	65.563	ENSONIG00000001860	npm1a	98	66.230	Oreochromis_niloticus
ENSXMAG00000000396	npm1a	100	68.421	ENSORLG00000010179	npm1a	100	68.750	Oryzias_latipes
ENSXMAG00000000396	npm1a	100	69.079	ENSORLG00020020817	npm1a	100	69.737	Oryzias_latipes_hni
ENSXMAG00000000396	npm1a	100	68.421	ENSORLG00015003439	npm1a	100	68.750	Oryzias_latipes_hsok
ENSXMAG00000000396	npm1a	100	71.053	ENSOMEG00000007083	npm1a	100	71.053	Oryzias_melastigma
ENSXMAG00000000396	npm1a	100	53.698	ENSPKIG00000023943	npm1a	100	52.769	Paramormyrops_kingsleyae
ENSXMAG00000000396	npm1a	100	55.921	ENSPMGG00000011716	npm1a	100	55.921	Periophthalmus_magnuspinnatus
ENSXMAG00000000396	npm1a	100	88.449	ENSPFOG00000019173	npm1a	100	88.449	Poecilia_formosa
ENSXMAG00000000396	npm1a	100	88.119	ENSPLAG00000001093	npm1a	100	88.449	Poecilia_latipinna
ENSXMAG00000000396	npm1a	100	88.449	ENSPMEG00000012523	npm1a	100	88.449	Poecilia_mexicana
ENSXMAG00000000396	npm1a	100	88.449	ENSPREG00000001647	npm1a	100	88.449	Poecilia_reticulata
ENSXMAG00000000396	npm1a	99	69.427	ENSPNYG00000019321	npm1a	100	69.427	Pundamilia_nyererei
ENSXMAG00000000396	npm1a	99	53.746	ENSPNAG00000026891	npm1a	99	54.575	Pygocentrus_nattereri
ENSXMAG00000000396	npm1a	100	57.468	ENSSFOG00015007074	npm1a	100	57.468	Scleropages_formosus
ENSXMAG00000000396	npm1a	100	68.730	ENSSMAG00000019090	npm1a	100	69.381	Scophthalmus_maximus
ENSXMAG00000000396	npm1a	100	68.852	ENSSDUG00000015609	npm1a	100	69.180	Seriola_dumerili
ENSXMAG00000000396	npm1a	100	70.066	ENSSLDG00000017849	npm1a	100	70.066	Seriola_lalandi_dorsalis
ENSXMAG00000000396	npm1a	100	59.539	ENSSPAG00000021660	npm1a	100	56.766	Stegastes_partitus
ENSXMAG00000000396	npm1a	100	68.285	ENSTRUG00000024003	npm1a	100	68.092	Takifugu_rubripes
ENSXMAG00000000396	npm1a	100	65.461	ENSTNIG00000010773	npm1a	100	66.118	Tetraodon_nigroviridis
ENSXMAG00000000396	npm1a	93	93.333	ENSXCOG00000005958	npm1a	100	93.333	Xiphophorus_couchianus