EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000000409 (Gene tree)
Gene ID: 102229723
Gene Symbol: nup35
Alias: fj68d11|wu:fj68d11|zgc:65979
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6176 bases
Position: chr7:4294073-4300248
Accession: 102229723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000000410	Nup35_RRM	PF05172.13	1.3e-25	1	1
ENSXMAP00000000410	Nup35_RRM_2	PF14605.6	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000000412	-	2232	XM_023337443	ENSXMAP00000000410	296 (aa)	XP_023193211	M3ZDW8

Gene Model

Click here to download ENSXMAG00000000409's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000000409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000000409	nup35	99	61.755	ENSG00000163002	NUP35	100	66.250	Homo_sapiens
ENSXMAG00000000409	nup35	100	85.235	ENSAPOG00000003630	nup35	100	85.235	Acanthochromis_polyacanthus
ENSXMAG00000000409	nup35	99	61.059	ENSAMEG00000001191	NUP35	96	59.813	Ailuropoda_melanoleuca
ENSXMAG00000000409	nup35	78	87.069	ENSACIG00000023984	nup35	95	88.546	Amphilophus_citrinellus
ENSXMAG00000000409	nup35	100	86.242	ENSAOCG00000007484	nup35	100	86.242	Amphiprion_ocellaris
ENSXMAG00000000409	nup35	100	86.577	ENSAPEG00000020027	nup35	100	86.577	Amphiprion_percula
ENSXMAG00000000409	nup35	100	87.919	ENSATEG00000019305	nup35	100	87.584	Anabas_testudineus
ENSXMAG00000000409	nup35	99	62.112	ENSAPLG00000009161	NUP35	97	61.491	Anas_platyrhynchos
ENSXMAG00000000409	nup35	99	60.615	ENSACAG00000008692	NUP35	96	60.615	Anolis_carolinensis
ENSXMAG00000000409	nup35	99	61.755	ENSANAG00000021090	NUP35	96	60.502	Aotus_nancymaae
ENSXMAG00000000409	nup35	100	88.176	ENSACLG00000013918	nup35	100	88.176	Astatotilapia_calliptera
ENSXMAG00000000409	nup35	99	64.557	ENSAMXG00000003371	nup35	100	63.987	Astyanax_mexicanus
ENSXMAG00000000409	nup35	99	61.755	ENSBTAG00000009777	NUP35	96	60.815	Bos_taurus
ENSXMAG00000000409	nup35	99	61.129	ENSCJAG00000011104	NUP35	96	60.502	Callithrix_jacchus
ENSXMAG00000000409	nup35	97	60.127	ENSCAFG00000031849	NUP35	100	59.177	Canis_familiaris
ENSXMAG00000000409	nup35	98	60.625	ENSCAFG00020008408	NUP35	96	59.688	Canis_lupus_dingo
ENSXMAG00000000409	nup35	97	60.828	ENSCHIG00000023148	NUP35	100	59.873	Capra_hircus
ENSXMAG00000000409	nup35	99	60.502	ENSTSYG00000002117	NUP35	96	59.875	Carlito_syrichta
ENSXMAG00000000409	nup35	98	50.789	ENSCAPG00000005703	NUP35	97	50.938	Cavia_aperea
ENSXMAG00000000409	nup35	99	61.129	ENSCPOG00000011906	NUP35	97	61.514	Cavia_porcellus
ENSXMAG00000000409	nup35	99	61.129	ENSCCAG00000025009	NUP35	100	60.500	Cebus_capucinus
ENSXMAG00000000409	nup35	99	55.844	ENSCATG00000033109	NUP35	96	54.870	Cercocebus_atys
ENSXMAG00000000409	nup35	99	60.436	ENSCLAG00000012559	NUP35	96	60.502	Chinchilla_lanigera
ENSXMAG00000000409	nup35	99	61.442	ENSCSAG00000012620	NUP35	96	60.502	Chlorocebus_sabaeus
ENSXMAG00000000409	nup35	100	61.420	ENSCPBG00000001303	NUP35	98	61.728	Chrysemys_picta_bellii
ENSXMAG00000000409	nup35	97	43.492	ENSCING00000009659	-	97	42.222	Ciona_intestinalis
ENSXMAG00000000409	nup35	98	40.828	ENSCSAVG00000007467	-	99	40.828	Ciona_savignyi
ENSXMAG00000000409	nup35	99	61.442	ENSCANG00000030785	NUP35	100	60.191	Colobus_angolensis_palliatus
ENSXMAG00000000409	nup35	99	60.127	ENSCGRG00001018638	-	96	58.514	Cricetulus_griseus_chok1gshd
ENSXMAG00000000409	nup35	99	60.127	ENSCGRG00000011313	-	96	58.514	Cricetulus_griseus_crigri
ENSXMAG00000000409	nup35	100	81.333	ENSCSEG00000000938	nup35	100	79.667	Cynoglossus_semilaevis
ENSXMAG00000000409	nup35	100	89.527	ENSCVAG00000001792	nup35	100	88.851	Cyprinodon_variegatus
ENSXMAG00000000409	nup35	100	65.723	ENSDARG00000012222	nup35	100	65.823	Danio_rerio
ENSXMAG00000000409	nup35	99	61.129	ENSDNOG00000009513	-	85	60.188	Dasypus_novemcinctus
ENSXMAG00000000409	nup35	99	61.129	ENSDNOG00000038754	-	96	60.188	Dasypus_novemcinctus
ENSXMAG00000000409	nup35	99	59.939	ENSDORG00000010458	-	97	59.816	Dipodomys_ordii
ENSXMAG00000000409	nup35	98	60.883	ENSETEG00000005896	NUP35	100	59.385	Echinops_telfairi
ENSXMAG00000000409	nup35	98	53.754	ENSEBUG00000013034	nup35	99	52.553	Eptatretus_burgeri
ENSXMAG00000000409	nup35	99	61.755	ENSEASG00005022100	NUP35	96	60.815	Equus_asinus_asinus
ENSXMAG00000000409	nup35	99	61.755	ENSECAG00000003968	NUP35	100	60.510	Equus_caballus
ENSXMAG00000000409	nup35	99	54.829	ENSEEUG00000008469	NUP35	97	53.583	Erinaceus_europaeus
ENSXMAG00000000409	nup35	100	65.528	ENSELUG00000013693	nup35	100	64.907	Esox_lucius
ENSXMAG00000000409	nup35	99	59.190	ENSFCAG00000025636	NUP35	100	58.544	Felis_catus
ENSXMAG00000000409	nup35	100	61.538	ENSFALG00000013175	NUP35	98	60.923	Ficedula_albicollis
ENSXMAG00000000409	nup35	99	61.442	ENSFDAG00000017998	NUP35	96	61.129	Fukomys_damarensis
ENSXMAG00000000409	nup35	100	93.919	ENSFHEG00000010229	nup35	100	93.243	Fundulus_heteroclitus
ENSXMAG00000000409	nup35	77	69.328	ENSGMOG00000003337	nup35	99	66.383	Gadus_morhua
ENSXMAG00000000409	nup35	98	60.063	ENSGALG00000002689	NUP35	97	59.509	Gallus_gallus
ENSXMAG00000000409	nup35	100	98.311	ENSGAFG00000022048	nup35	100	98.311	Gambusia_affinis
ENSXMAG00000000409	nup35	100	83.557	ENSGACG00000008203	nup35	100	82.886	Gasterosteus_aculeatus
ENSXMAG00000000409	nup35	97	62.540	ENSGAGG00000001967	NUP35	100	62.540	Gopherus_agassizii
ENSXMAG00000000409	nup35	99	61.755	ENSGGOG00000009919	NUP35	96	60.815	Gorilla_gorilla
ENSXMAG00000000409	nup35	99	60.245	ENSHGLG00000013230	NUP35	96	60.502	Heterocephalus_glaber_female
ENSXMAG00000000409	nup35	98	47.883	ENSHGLG00000000414	-	97	46.906	Heterocephalus_glaber_female
ENSXMAG00000000409	nup35	92	54.110	ENSHGLG00000008616	-	90	53.767	Heterocephalus_glaber_female
ENSXMAG00000000409	nup35	92	54.110	ENSHGLG00100000091	-	91	53.767	Heterocephalus_glaber_male
ENSXMAG00000000409	nup35	99	60.245	ENSHGLG00100012840	NUP35	96	60.502	Heterocephalus_glaber_male
ENSXMAG00000000409	nup35	98	47.883	ENSHGLG00100010869	-	97	46.906	Heterocephalus_glaber_male
ENSXMAG00000000409	nup35	100	83.108	ENSHCOG00000003882	nup35	100	81.419	Hippocampus_comes
ENSXMAG00000000409	nup35	100	65.079	ENSIPUG00000002798	nup35	100	63.810	Ictalurus_punctatus
ENSXMAG00000000409	nup35	99	60.000	ENSSTOG00000000711	NUP35	96	59.385	Ictidomys_tridecemlineatus
ENSXMAG00000000409	nup35	98	55.380	ENSJJAG00000017434	-	96	54.747	Jaculus_jaculus
ENSXMAG00000000409	nup35	84	55.797	ENSJJAG00000006387	-	91	54.348	Jaculus_jaculus
ENSXMAG00000000409	nup35	100	59.150	ENSJJAG00000007003	-	97	57.843	Jaculus_jaculus
ENSXMAG00000000409	nup35	99	60.692	ENSJJAG00000016432	-	97	59.937	Jaculus_jaculus
ENSXMAG00000000409	nup35	100	86.869	ENSKMAG00000011162	nup35	100	86.869	Kryptolebias_marmoratus
ENSXMAG00000000409	nup35	99	67.458	ENSLBEG00000012416	nup35	99	66.102	Labrus_bergylta
ENSXMAG00000000409	nup35	97	63.376	ENSLACG00000008247	NUP35	100	62.739	Latimeria_chalumnae
ENSXMAG00000000409	nup35	100	65.244	ENSLOCG00000006726	nup35	100	65.244	Lepisosteus_oculatus
ENSXMAG00000000409	nup35	99	59.574	ENSLAFG00000008155	NUP35	96	58.879	Loxodonta_africana
ENSXMAG00000000409	nup35	99	61.129	ENSMFAG00000000834	NUP35	100	59.873	Macaca_fascicularis
ENSXMAG00000000409	nup35	99	61.442	ENSMMUG00000004140	NUP35	99	60.568	Macaca_mulatta
ENSXMAG00000000409	nup35	99	61.442	ENSMNEG00000029014	NUP35	96	60.502	Macaca_nemestrina
ENSXMAG00000000409	nup35	99	61.442	ENSMLEG00000035422	NUP35	100	60.191	Mandrillus_leucophaeus
ENSXMAG00000000409	nup35	100	86.486	ENSMAMG00000013232	nup35	100	83.784	Mastacembelus_armatus
ENSXMAG00000000409	nup35	99	85.235	ENSMZEG00005020619	nup35	98	87.500	Maylandia_zebra
ENSXMAG00000000409	nup35	97	58.917	ENSMGAG00000004412	NUP35	95	58.385	Meleagris_gallopavo
ENSXMAG00000000409	nup35	99	59.937	ENSMAUG00000013776	-	96	58.991	Mesocricetus_auratus
ENSXMAG00000000409	nup35	99	60.188	ENSMICG00000006790	NUP35	100	59.873	Microcebus_murinus
ENSXMAG00000000409	nup35	99	59.937	ENSMOCG00000014754	-	96	58.991	Microtus_ochrogaster
ENSXMAG00000000409	nup35	100	82.095	ENSMMOG00000005026	nup35	100	80.743	Mola_mola
ENSXMAG00000000409	nup35	99	61.538	ENSMODG00000010578	NUP35	96	61.231	Monodelphis_domestica
ENSXMAG00000000409	nup35	100	87.162	ENSMALG00000020187	nup35	100	84.122	Monopterus_albus
ENSXMAG00000000409	nup35	99	58.991	MGP_CAROLIEiJ_G0023709	-	96	58.360	Mus_caroli
ENSXMAG00000000409	nup35	99	59.621	ENSMUSG00000026999	Nup35	96	58.991	Mus_musculus
ENSXMAG00000000409	nup35	99	59.306	MGP_PahariEiJ_G0025160	-	96	58.360	Mus_pahari
ENSXMAG00000000409	nup35	78	51.203	MGP_SPRETEiJ_G0033063	-	96	50.350	Mus_spretus
ENSXMAG00000000409	nup35	99	59.813	ENSMPUG00000002063	NUP35	96	59.813	Mustela_putorius_furo
ENSXMAG00000000409	nup35	99	61.755	ENSMLUG00000013154	NUP35	96	61.129	Myotis_lucifugus
ENSXMAG00000000409	nup35	99	59.810	ENSNGAG00000012107	-	96	58.861	Nannospalax_galili
ENSXMAG00000000409	nup35	100	84.228	ENSNBRG00000020466	nup35	98	84.228	Neolamprologus_brichardi
ENSXMAG00000000409	nup35	99	61.755	ENSNLEG00000035026	NUP35	100	60.510	Nomascus_leucogenys
ENSXMAG00000000409	nup35	63	44.762	ENSMEUG00000003001	-	64	43.810	Notamacropus_eugenii
ENSXMAG00000000409	nup35	77	60.156	ENSOPRG00000016609	NUP35	77	58.893	Ochotona_princeps
ENSXMAG00000000409	nup35	98	43.810	ENSODEG00000000280	-	95	43.175	Octodon_degus
ENSXMAG00000000409	nup35	99	60.748	ENSODEG00000011202	-	97	60.125	Octodon_degus
ENSXMAG00000000409	nup35	100	88.294	ENSONIG00000016251	nup35	100	87.291	Oreochromis_niloticus
ENSXMAG00000000409	nup35	75	62.917	ENSOANG00000006793	-	97	62.917	Ornithorhynchus_anatinus
ENSXMAG00000000409	nup35	99	61.442	ENSOCUG00000014407	NUP35	96	60.502	Oryctolagus_cuniculus
ENSXMAG00000000409	nup35	100	85.570	ENSORLG00000013588	nup35	100	84.564	Oryzias_latipes
ENSXMAG00000000409	nup35	100	85.570	ENSORLG00020008201	nup35	100	84.564	Oryzias_latipes_hni
ENSXMAG00000000409	nup35	100	85.235	ENSORLG00015011096	nup35	100	84.228	Oryzias_latipes_hsok
ENSXMAG00000000409	nup35	100	86.242	ENSOMEG00000007628	nup35	100	84.564	Oryzias_melastigma
ENSXMAG00000000409	nup35	99	59.875	ENSOGAG00000011920	NUP35	96	59.875	Otolemur_garnettii
ENSXMAG00000000409	nup35	99	61.129	ENSOARG00000016728	NUP35	96	60.502	Ovis_aries
ENSXMAG00000000409	nup35	99	61.755	ENSPPAG00000036316	NUP35	100	60.510	Pan_paniscus
ENSXMAG00000000409	nup35	99	59.502	ENSPPRG00000024726	NUP35	100	58.861	Panthera_pardus
ENSXMAG00000000409	nup35	99	59.502	ENSPTIG00000017299	NUP35	96	59.190	Panthera_tigris_altaica
ENSXMAG00000000409	nup35	99	61.755	ENSPTRG00000012711	NUP35	100	60.510	Pan_troglodytes
ENSXMAG00000000409	nup35	99	61.442	ENSPANG00000013686	NUP35	96	60.502	Papio_anubis
ENSXMAG00000000409	nup35	100	64.526	ENSPKIG00000022051	nup35	100	64.832	Paramormyrops_kingsleyae
ENSXMAG00000000409	nup35	97	61.465	ENSPSIG00000002146	NUP35	100	61.465	Pelodiscus_sinensis
ENSXMAG00000000409	nup35	97	69.637	ENSPMGG00000022915	nup35	97	70.297	Periophthalmus_magnuspinnatus
ENSXMAG00000000409	nup35	99	60.252	ENSPEMG00000014718	-	96	59.306	Peromyscus_maniculatus_bairdii
ENSXMAG00000000409	nup35	99	54.769	ENSPMAG00000006604	nup35	98	53.231	Petromyzon_marinus
ENSXMAG00000000409	nup35	99	60.245	ENSPCIG00000015482	NUP35	96	59.939	Phascolarctos_cinereus
ENSXMAG00000000409	nup35	100	98.649	ENSPFOG00000010020	nup35	100	98.649	Poecilia_formosa
ENSXMAG00000000409	nup35	100	98.311	ENSPLAG00000005867	nup35	100	98.311	Poecilia_latipinna
ENSXMAG00000000409	nup35	100	98.649	ENSPMEG00000010552	nup35	100	98.649	Poecilia_mexicana
ENSXMAG00000000409	nup35	100	93.581	ENSPREG00000021005	nup35	100	93.581	Poecilia_reticulata
ENSXMAG00000000409	nup35	98	61.950	ENSPPYG00000012998	-	77	61.006	Pongo_abelii
ENSXMAG00000000409	nup35	98	45.048	ENSPCAG00000000605	NUP35	77	82.927	Procavia_capensis
ENSXMAG00000000409	nup35	99	60.502	ENSPCOG00000024097	NUP35	96	60.502	Propithecus_coquereli
ENSXMAG00000000409	nup35	99	59.633	ENSPVAG00000015908	NUP35	96	59.327	Pteropus_vampyrus
ENSXMAG00000000409	nup35	99	87.075	ENSPNYG00000012486	nup35	96	86.054	Pundamilia_nyererei
ENSXMAG00000000409	nup35	99	66.032	ENSPNAG00000005181	nup35	98	65.079	Pygocentrus_nattereri
ENSXMAG00000000409	nup35	99	59.937	ENSRNOG00000009290	Nup35	96	58.991	Rattus_norvegicus
ENSXMAG00000000409	nup35	99	61.442	ENSRBIG00000039427	NUP35	100	60.191	Rhinopithecus_bieti
ENSXMAG00000000409	nup35	99	61.442	ENSRROG00000026525	NUP35	95	62.963	Rhinopithecus_roxellana
ENSXMAG00000000409	nup35	99	61.129	ENSSBOG00000018676	NUP35	100	61.000	Saimiri_boliviensis_boliviensis
ENSXMAG00000000409	nup35	99	60.815	ENSSHAG00000009746	NUP35	96	60.502	Sarcophilus_harrisii
ENSXMAG00000000409	nup35	100	65.443	ENSSFOG00015002390	nup35	100	66.250	Scleropages_formosus
ENSXMAG00000000409	nup35	100	84.615	ENSSMAG00000015651	nup35	100	83.278	Scophthalmus_maximus
ENSXMAG00000000409	nup35	100	85.570	ENSSDUG00000013118	nup35	100	84.564	Seriola_dumerili
ENSXMAG00000000409	nup35	99	84.694	ENSSLDG00000018249	nup35	98	84.354	Seriola_lalandi_dorsalis
ENSXMAG00000000409	nup35	98	45.963	ENSSARG00000001535	-	100	45.963	Sorex_araneus
ENSXMAG00000000409	nup35	99	61.059	ENSSPUG00000018651	NUP35	97	61.059	Sphenodon_punctatus
ENSXMAG00000000409	nup35	100	86.577	ENSSPAG00000018264	nup35	100	86.242	Stegastes_partitus
ENSXMAG00000000409	nup35	99	60.372	ENSSSCG00000028949	NUP35	96	60.188	Sus_scrofa
ENSXMAG00000000409	nup35	99	60.802	ENSTGUG00000011278	NUP35	98	59.752	Taeniopygia_guttata
ENSXMAG00000000409	nup35	93	71.377	ENSTRUG00000014111	nup35	100	70.909	Takifugu_rubripes
ENSXMAG00000000409	nup35	99	64.286	ENSTNIG00000011568	nup35	95	64.286	Tetraodon_nigroviridis
ENSXMAG00000000409	nup35	99	58.805	ENSTBEG00000003328	NUP35	96	57.862	Tupaia_belangeri
ENSXMAG00000000409	nup35	99	54.870	ENSTTRG00000002512	NUP35	96	53.896	Tursiops_truncatus
ENSXMAG00000000409	nup35	63	62.312	ENSUAMG00000018696	-	97	60.302	Ursus_americanus
ENSXMAG00000000409	nup35	91	58.586	ENSUMAG00000017104	NUP35	96	57.912	Ursus_maritimus
ENSXMAG00000000409	nup35	99	61.129	ENSVPAG00000011898	NUP35	96	60.188	Vicugna_pacos
ENSXMAG00000000409	nup35	97	59.810	ENSVVUG00000016832	NUP35	100	58.861	Vulpes_vulpes
ENSXMAG00000000409	nup35	98	55.247	ENSXETG00000001335	nup35	98	51.807	Xenopus_tropicalis