EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000000526 (Gene tree)
Gene ID: 102224348
Gene Symbol: trip4
Alias: im:7143009|si:busm1-221i3.1|si:dkey-173l11.4|zgc:153348
Full Name: thyroid hormone receptor interactor 4
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 88824 bases
Position: chr4:26149567-26238390
Accession: 102224348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000028002	ASCH	PF04266.14	2.2e-20	1	1
ENSXMAP00000000529	ASCH	PF04266.14	4.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000000531	-	3559	XM_023331888	ENSXMAP00000000529	563 (aa)	XP_023187656	M3ZE87
ENSXMAT00000041582	-	3662	XM_023331887	ENSXMAP00000028002	573 (aa)	XP_023187655	UPI000C6DE8D8

Gene Model

Click here to download ENSXMAG00000000526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000000526's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000000526	trip4	99	59.375	ENSG00000103671	TRIP4	97	58.681	Homo_sapiens
ENSXMAG00000000526	trip4	99	62.694	ENSAPOG00000023326	trip4	99	63.304	Acanthochromis_polyacanthus
ENSXMAG00000000526	trip4	99	59.375	ENSAMEG00000002591	TRIP4	97	58.681	Ailuropoda_melanoleuca
ENSXMAG00000000526	trip4	96	74.275	ENSACIG00000010577	trip4	98	74.275	Amphilophus_citrinellus
ENSXMAG00000000526	trip4	92	82.432	ENSAOCG00000000395	trip4	90	82.432	Amphiprion_ocellaris
ENSXMAG00000000526	trip4	99	83.741	ENSAPEG00000003621	trip4	99	83.741	Amphiprion_percula
ENSXMAG00000000526	trip4	99	82.867	ENSATEG00000019577	trip4	99	82.867	Anabas_testudineus
ENSXMAG00000000526	trip4	99	61.684	ENSAPLG00000004612	TRIP4	99	61.168	Anas_platyrhynchos
ENSXMAG00000000526	trip4	99	60.653	ENSACAG00000007077	TRIP4	89	60.653	Anolis_carolinensis
ENSXMAG00000000526	trip4	99	59.028	ENSANAG00000027612	TRIP4	97	58.333	Aotus_nancymaae
ENSXMAG00000000526	trip4	99	84.266	ENSACLG00000013819	trip4	99	84.266	Astatotilapia_calliptera
ENSXMAG00000000526	trip4	99	72.600	ENSAMXG00000007270	trip4	100	72.600	Astyanax_mexicanus
ENSXMAG00000000526	trip4	99	59.826	ENSBTAG00000014493	TRIP4	97	59.130	Bos_taurus
ENSXMAG00000000526	trip4	99	58.854	ENSCJAG00000005107	TRIP4	97	58.160	Callithrix_jacchus
ENSXMAG00000000526	trip4	99	59.028	ENSCAFG00000017091	TRIP4	97	58.333	Canis_familiaris
ENSXMAG00000000526	trip4	99	59.028	ENSCAFG00020008960	TRIP4	97	58.333	Canis_lupus_dingo
ENSXMAG00000000526	trip4	96	58.497	ENSCHIG00000023818	TRIP4	96	57.782	Capra_hircus
ENSXMAG00000000526	trip4	98	58.711	ENSTSYG00000007185	TRIP4	97	58.014	Carlito_syrichta
ENSXMAG00000000526	trip4	66	68.421	ENSCAPG00000017624	TRIP4	82	68.421	Cavia_aperea
ENSXMAG00000000526	trip4	99	58.885	ENSCPOG00000006483	TRIP4	97	58.188	Cavia_porcellus
ENSXMAG00000000526	trip4	99	56.446	ENSCCAG00000026483	TRIP4	97	55.226	Cebus_capucinus
ENSXMAG00000000526	trip4	99	59.375	ENSCATG00000041144	TRIP4	97	58.681	Cercocebus_atys
ENSXMAG00000000526	trip4	99	60.659	ENSCLAG00000006872	TRIP4	97	59.965	Chinchilla_lanigera
ENSXMAG00000000526	trip4	99	59.375	ENSCSAG00000012499	TRIP4	97	58.681	Chlorocebus_sabaeus
ENSXMAG00000000526	trip4	76	55.955	ENSCHOG00000010776	TRIP4	76	55.056	Choloepus_hoffmanni
ENSXMAG00000000526	trip4	96	60.746	ENSCPBG00000006093	TRIP4	97	61.002	Chrysemys_picta_bellii
ENSXMAG00000000526	trip4	98	43.339	ENSCSAVG00000005293	-	98	43.170	Ciona_savignyi
ENSXMAG00000000526	trip4	99	57.018	ENSCANG00000033593	TRIP4	97	56.316	Colobus_angolensis_palliatus
ENSXMAG00000000526	trip4	99	58.834	ENSCGRG00001021158	Trip4	97	57.976	Cricetulus_griseus_chok1gshd
ENSXMAG00000000526	trip4	87	58.596	ENSCGRG00000002340	Trip4	98	56.842	Cricetulus_griseus_crigri
ENSXMAG00000000526	trip4	99	79.058	ENSCSEG00000009015	trip4	99	79.058	Cynoglossus_semilaevis
ENSXMAG00000000526	trip4	92	87.066	ENSCVAG00000020984	trip4	98	87.066	Cyprinodon_variegatus
ENSXMAG00000000526	trip4	98	78.253	ENSCVAG00000021094	-	96	78.253	Cyprinodon_variegatus
ENSXMAG00000000526	trip4	99	71.804	ENSDARG00000098074	trip4	100	71.777	Danio_rerio
ENSXMAG00000000526	trip4	99	60.690	ENSDNOG00000008654	TRIP4	97	61.217	Dasypus_novemcinctus
ENSXMAG00000000526	trip4	99	58.377	ENSDORG00000014914	Trip4	97	57.686	Dipodomys_ordii
ENSXMAG00000000526	trip4	79	41.228	FBgn0031115	CG11710	80	42.326	Drosophila_melanogaster
ENSXMAG00000000526	trip4	98	59.860	ENSETEG00000001597	TRIP4	97	58.957	Echinops_telfairi
ENSXMAG00000000526	trip4	99	47.120	ENSEBUG00000009039	trip4	99	48.342	Eptatretus_burgeri
ENSXMAG00000000526	trip4	99	59.375	ENSEASG00005006538	TRIP4	97	58.681	Equus_asinus_asinus
ENSXMAG00000000526	trip4	92	58.333	ENSECAG00000024689	TRIP4	95	57.605	Equus_caballus
ENSXMAG00000000526	trip4	79	62.032	ENSEEUG00000007741	TRIP4	78	62.032	Erinaceus_europaeus
ENSXMAG00000000526	trip4	100	70.783	ENSELUG00000022449	trip4	100	70.783	Esox_lucius
ENSXMAG00000000526	trip4	99	59.278	ENSFCAG00000010618	TRIP4	97	58.591	Felis_catus
ENSXMAG00000000526	trip4	99	60.611	ENSFALG00000009816	TRIP4	99	60.272	Ficedula_albicollis
ENSXMAG00000000526	trip4	99	59.170	ENSFDAG00000017051	TRIP4	97	59.170	Fukomys_damarensis
ENSXMAG00000000526	trip4	99	88.831	ENSFHEG00000015795	trip4	99	88.831	Fundulus_heteroclitus
ENSXMAG00000000526	trip4	99	73.043	ENSGMOG00000008455	trip4	99	73.043	Gadus_morhua
ENSXMAG00000000526	trip4	99	61.197	ENSGALG00000030672	TRIP4	99	60.855	Gallus_gallus
ENSXMAG00000000526	trip4	100	97.208	ENSGAFG00000003491	trip4	100	97.208	Gambusia_affinis
ENSXMAG00000000526	trip4	99	78.313	ENSGACG00000016986	trip4	99	78.313	Gasterosteus_aculeatus
ENSXMAG00000000526	trip4	82	61.983	ENSGAGG00000003671	TRIP4	86	61.983	Gopherus_agassizii
ENSXMAG00000000526	trip4	99	59.375	ENSGGOG00000022608	TRIP4	97	58.681	Gorilla_gorilla
ENSXMAG00000000526	trip4	99	84.266	ENSHBUG00000021071	trip4	99	84.266	Haplochromis_burtoni
ENSXMAG00000000526	trip4	99	58.507	ENSHGLG00000009286	TRIP4	97	57.812	Heterocephalus_glaber_female
ENSXMAG00000000526	trip4	99	58.333	ENSHGLG00100017760	TRIP4	97	57.639	Heterocephalus_glaber_male
ENSXMAG00000000526	trip4	99	78.846	ENSHCOG00000017904	trip4	99	78.846	Hippocampus_comes
ENSXMAG00000000526	trip4	99	70.139	ENSIPUG00000013205	trip4	100	70.312	Ictalurus_punctatus
ENSXMAG00000000526	trip4	99	60.627	ENSSTOG00000014228	TRIP4	97	59.930	Ictidomys_tridecemlineatus
ENSXMAG00000000526	trip4	96	53.860	ENSJJAG00000001629	Trip4	98	53.142	Jaculus_jaculus
ENSXMAG00000000526	trip4	99	83.217	ENSKMAG00000001297	trip4	99	83.217	Kryptolebias_marmoratus
ENSXMAG00000000526	trip4	99	82.343	ENSLBEG00000018354	trip4	99	82.343	Labrus_bergylta
ENSXMAG00000000526	trip4	99	63.040	ENSLACG00000014856	TRIP4	99	63.040	Latimeria_chalumnae
ENSXMAG00000000526	trip4	99	68.229	ENSLOCG00000014993	trip4	99	68.056	Lepisosteus_oculatus
ENSXMAG00000000526	trip4	99	60.069	ENSLAFG00000017612	TRIP4	97	59.375	Loxodonta_africana
ENSXMAG00000000526	trip4	99	59.549	ENSMFAG00000036568	TRIP4	97	58.854	Macaca_fascicularis
ENSXMAG00000000526	trip4	99	59.549	ENSMMUG00000009882	TRIP4	97	58.854	Macaca_mulatta
ENSXMAG00000000526	trip4	99	59.549	ENSMNEG00000033592	TRIP4	97	58.854	Macaca_nemestrina
ENSXMAG00000000526	trip4	99	59.375	ENSMLEG00000027911	TRIP4	97	58.681	Mandrillus_leucophaeus
ENSXMAG00000000526	trip4	99	82.230	ENSMAMG00000013374	trip4	99	82.056	Mastacembelus_armatus
ENSXMAG00000000526	trip4	99	84.266	ENSMZEG00005013450	trip4	99	84.266	Maylandia_zebra
ENSXMAG00000000526	trip4	99	60.069	ENSMICG00000008679	TRIP4	97	59.375	Microcebus_murinus
ENSXMAG00000000526	trip4	99	60.139	ENSMOCG00000012669	Trip4	97	59.272	Microtus_ochrogaster
ENSXMAG00000000526	trip4	97	80.866	ENSMMOG00000002315	trip4	98	80.866	Mola_mola
ENSXMAG00000000526	trip4	99	60.757	ENSMODG00000010743	TRIP4	89	60.757	Monodelphis_domestica
ENSXMAG00000000526	trip4	99	59.170	MGP_CAROLIEiJ_G0032370	Trip4	97	58.478	Mus_caroli
ENSXMAG00000000526	trip4	99	59.343	ENSMUSG00000032386	Trip4	97	58.478	Mus_musculus
ENSXMAG00000000526	trip4	99	57.732	MGP_PahariEiJ_G0015235	Trip4	97	56.873	Mus_pahari
ENSXMAG00000000526	trip4	99	59.445	MGP_SPRETEiJ_G0033509	Trip4	97	58.579	Mus_spretus
ENSXMAG00000000526	trip4	99	58.854	ENSMPUG00000000568	TRIP4	97	58.160	Mustela_putorius_furo
ENSXMAG00000000526	trip4	95	60.036	ENSMLUG00000013367	TRIP4	99	59.319	Myotis_lucifugus
ENSXMAG00000000526	trip4	99	59.520	ENSNGAG00000019566	Trip4	97	58.491	Nannospalax_galili
ENSXMAG00000000526	trip4	97	81.183	ENSNBRG00000020663	trip4	98	81.541	Neolamprologus_brichardi
ENSXMAG00000000526	trip4	99	59.375	ENSNLEG00000012455	TRIP4	97	58.681	Nomascus_leucogenys
ENSXMAG00000000526	trip4	64	56.915	ENSMEUG00000005886	TRIP4	75	56.915	Notamacropus_eugenii
ENSXMAG00000000526	trip4	99	57.266	ENSOPRG00000009512	TRIP4	98	56.574	Ochotona_princeps
ENSXMAG00000000526	trip4	99	58.419	ENSODEG00000016494	TRIP4	97	57.732	Octodon_degus
ENSXMAG00000000526	trip4	92	81.559	ENSONIG00000005703	trip4	99	81.559	Oreochromis_niloticus
ENSXMAG00000000526	trip4	99	60.208	ENSOANG00000013357	TRIP4	96	59.343	Ornithorhynchus_anatinus
ENSXMAG00000000526	trip4	99	59.201	ENSOCUG00000002322	TRIP4	97	58.507	Oryctolagus_cuniculus
ENSXMAG00000000526	trip4	99	77.257	ENSORLG00000001710	trip4	99	77.257	Oryzias_latipes
ENSXMAG00000000526	trip4	99	77.448	ENSORLG00020022346	trip4	99	77.448	Oryzias_latipes_hni
ENSXMAG00000000526	trip4	99	77.098	ENSORLG00015022509	trip4	99	77.098	Oryzias_latipes_hsok
ENSXMAG00000000526	trip4	99	79.196	ENSOMEG00000007655	trip4	99	79.196	Oryzias_melastigma
ENSXMAG00000000526	trip4	99	52.324	ENSOGAG00000012427	TRIP4	97	52.166	Otolemur_garnettii
ENSXMAG00000000526	trip4	98	59.511	ENSOARG00000020739	TRIP4	97	58.813	Ovis_aries
ENSXMAG00000000526	trip4	99	59.375	ENSPPAG00000017953	TRIP4	97	58.681	Pan_paniscus
ENSXMAG00000000526	trip4	99	59.549	ENSPPRG00000013668	TRIP4	97	58.854	Panthera_pardus
ENSXMAG00000000526	trip4	99	59.107	ENSPTIG00000014502	TRIP4	97	58.419	Panthera_tigris_altaica
ENSXMAG00000000526	trip4	99	55.052	ENSPTRG00000007160	TRIP4	97	54.355	Pan_troglodytes
ENSXMAG00000000526	trip4	99	59.375	ENSPANG00000016750	TRIP4	97	58.681	Papio_anubis
ENSXMAG00000000526	trip4	92	66.226	ENSPKIG00000009253	trip4	99	66.226	Paramormyrops_kingsleyae
ENSXMAG00000000526	trip4	99	67.814	ENSPKIG00000022978	-	100	67.814	Paramormyrops_kingsleyae
ENSXMAG00000000526	trip4	95	61.717	ENSPSIG00000012082	TRIP4	98	61.717	Pelodiscus_sinensis
ENSXMAG00000000526	trip4	96	78.237	ENSPMGG00000019015	trip4	94	78.237	Periophthalmus_magnuspinnatus
ENSXMAG00000000526	trip4	99	58.433	ENSPEMG00000012446	Trip4	97	57.581	Peromyscus_maniculatus_bairdii
ENSXMAG00000000526	trip4	99	60.653	ENSPCIG00000029450	TRIP4	93	60.653	Phascolarctos_cinereus
ENSXMAG00000000526	trip4	100	95.986	ENSPFOG00000014732	trip4	100	95.986	Poecilia_formosa
ENSXMAG00000000526	trip4	100	95.812	ENSPLAG00000013794	trip4	100	95.812	Poecilia_latipinna
ENSXMAG00000000526	trip4	100	96.161	ENSPMEG00000001331	trip4	100	96.161	Poecilia_mexicana
ENSXMAG00000000526	trip4	100	95.462	ENSPREG00000006576	trip4	100	95.462	Poecilia_reticulata
ENSXMAG00000000526	trip4	99	59.549	ENSPPYG00000006550	TRIP4	97	58.854	Pongo_abelii
ENSXMAG00000000526	trip4	98	52.265	ENSPCAG00000016310	TRIP4	97	51.568	Procavia_capensis
ENSXMAG00000000526	trip4	99	46.329	ENSPCOG00000013484	TRIP4	97	46.127	Propithecus_coquereli
ENSXMAG00000000526	trip4	96	53.036	ENSPVAG00000016613	TRIP4	98	52.321	Pteropus_vampyrus
ENSXMAG00000000526	trip4	97	71.892	ENSPNYG00000011318	trip4	95	73.827	Pundamilia_nyererei
ENSXMAG00000000526	trip4	99	71.231	ENSPNAG00000020884	trip4	99	71.231	Pygocentrus_nattereri
ENSXMAG00000000526	trip4	99	58.276	ENSRNOG00000016121	Trip4	97	57.586	Rattus_norvegicus
ENSXMAG00000000526	trip4	86	60.215	ENSRBIG00000038027	TRIP4	97	60.215	Rhinopithecus_bieti
ENSXMAG00000000526	trip4	99	59.375	ENSRROG00000030525	TRIP4	97	58.681	Rhinopithecus_roxellana
ENSXMAG00000000526	trip4	99	52.817	ENSSBOG00000020516	TRIP4	97	52.817	Saimiri_boliviensis_boliviensis
ENSXMAG00000000526	trip4	95	61.141	ENSSHAG00000000040	TRIP4	99	61.141	Sarcophilus_harrisii
ENSXMAG00000000526	trip4	100	67.526	ENSSFOG00015000143	trip4	100	67.526	Scleropages_formosus
ENSXMAG00000000526	trip4	99	77.972	ENSSMAG00000010539	trip4	100	77.972	Scophthalmus_maximus
ENSXMAG00000000526	trip4	99	81.993	ENSSDUG00000000225	trip4	99	81.993	Seriola_dumerili
ENSXMAG00000000526	trip4	99	81.643	ENSSLDG00000000215	trip4	99	81.643	Seriola_lalandi_dorsalis
ENSXMAG00000000526	trip4	82	59.172	ENSSARG00000003710	TRIP4	79	59.172	Sorex_araneus
ENSXMAG00000000526	trip4	98	55.814	ENSSPUG00000004511	TRIP4	98	55.814	Sphenodon_punctatus
ENSXMAG00000000526	trip4	99	82.753	ENSSPAG00000008520	trip4	99	82.753	Stegastes_partitus
ENSXMAG00000000526	trip4	99	60.312	ENSSSCG00000004552	TRIP4	97	59.946	Sus_scrofa
ENSXMAG00000000526	trip4	99	59.343	ENSTGUG00000004673	TRIP4	100	60.554	Taeniopygia_guttata
ENSXMAG00000000526	trip4	99	78.223	ENSTRUG00000016488	trip4	99	78.223	Takifugu_rubripes
ENSXMAG00000000526	trip4	99	73.196	ENSTNIG00000009582	trip4	98	73.196	Tetraodon_nigroviridis
ENSXMAG00000000526	trip4	94	59.820	ENSTBEG00000015881	TRIP4	99	59.099	Tupaia_belangeri
ENSXMAG00000000526	trip4	87	63.115	ENSTTRG00000009674	TRIP4	86	63.115	Tursiops_truncatus
ENSXMAG00000000526	trip4	99	59.375	ENSUMAG00000012640	TRIP4	97	58.681	Ursus_maritimus
ENSXMAG00000000526	trip4	99	55.556	ENSVPAG00000010808	TRIP4	97	54.861	Vicugna_pacos
ENSXMAG00000000526	trip4	99	59.445	ENSVVUG00000013776	TRIP4	97	58.752	Vulpes_vulpes
ENSXMAG00000000526	trip4	99	58.048	ENSXETG00000010649	trip4	98	58.048	Xenopus_tropicalis