EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000000866 (Gene tree)
Gene ID: 111612081
Gene Symbol: -
Alias: -
Full Name: ring finger protein 168
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 15098 bases
Position: chr18:2046812-2061909
Accession: 102219684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000000858	zf-C2H2	PF00096.26	1.8e-48	1	7
ENSXMAP00000000858	zf-C2H2	PF00096.26	1.8e-48	2	7
ENSXMAP00000000858	zf-C2H2	PF00096.26	1.8e-48	3	7
ENSXMAP00000000858	zf-C2H2	PF00096.26	1.8e-48	4	7
ENSXMAP00000000858	zf-C2H2	PF00096.26	1.8e-48	5	7
ENSXMAP00000000858	zf-C2H2	PF00096.26	1.8e-48	6	7
ENSXMAP00000000858	zf-C2H2	PF00096.26	1.8e-48	7	7
ENSXMAP00000000858	zf-met	PF12874.7	2.4e-16	1	4
ENSXMAP00000000858	zf-met	PF12874.7	2.4e-16	2	4
ENSXMAP00000000858	zf-met	PF12874.7	2.4e-16	3	4
ENSXMAP00000000858	zf-met	PF12874.7	2.4e-16	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000000861	-	3514	XM_023352105	ENSXMAP00000000858	842 (aa)	XP_023207873	M3ZF66
ENSXMAT00000022045	-	360	-	ENSXMAP00000021480	119 (aa)	-	-
ENSXMAT00000028545	-	3359	XM_005813625	ENSXMAP00000032434	426 (aa)	XP_005813682	UPI0003B52294

Gene Model

Click here to download ENSXMAG00000000866's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000000866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000000866	-	87	63.235	ENSAPOG00000001563	-	97	72.553	Acanthochromis_polyacanthus
ENSXMAG00000000866	-	59	47.778	ENSACIG00000015411	-	90	65.613	Amphilophus_citrinellus
ENSXMAG00000000866	-	81	58.209	ENSAOCG00000013505	-	91	59.740	Amphiprion_ocellaris
ENSXMAG00000000866	-	60	80.169	ENSAOCG00000013589	-	91	80.169	Amphiprion_ocellaris
ENSXMAG00000000866	-	83	56.851	ENSAPEG00000022756	-	92	58.761	Amphiprion_percula
ENSXMAG00000000866	-	60	80.180	ENSAPEG00000022774	-	86	79.821	Amphiprion_percula
ENSXMAG00000000866	-	81	58.442	ENSATEG00000019284	-	86	58.442	Anabas_testudineus
ENSXMAG00000000866	-	56	78.613	ENSATEG00000019261	-	83	78.977	Anabas_testudineus
ENSXMAG00000000866	-	62	75.120	ENSACLG00000008624	-	97	75.120	Astatotilapia_calliptera
ENSXMAG00000000866	-	57	82.927	ENSACLG00000008606	-	90	82.927	Astatotilapia_calliptera
ENSXMAG00000000866	-	83	59.229	ENSCSEG00000008903	-	99	59.560	Cynoglossus_semilaevis
ENSXMAG00000000866	-	71	76.064	ENSCVAG00000016534	-	77	76.064	Cyprinodon_variegatus
ENSXMAG00000000866	-	59	61.345	ENSGMOG00000000494	-	99	61.345	Gadus_morhua
ENSXMAG00000000866	-	100	89.074	ENSGAFG00000002659	-	100	89.430	Gambusia_affinis
ENSXMAG00000000866	-	65	72.826	ENSGACG00000001377	-	99	72.826	Gasterosteus_aculeatus
ENSXMAG00000000866	-	59	69.922	ENSHBUG00000008502	-	92	69.922	Haplochromis_burtoni
ENSXMAG00000000866	-	85	60.219	ENSHCOG00000000511	-	94	71.951	Hippocampus_comes
ENSXMAG00000000866	-	84	53.494	ENSLBEG00000018509	-	92	72.299	Labrus_bergylta
ENSXMAG00000000866	-	85	62.924	ENSMAMG00000018137	-	95	62.924	Mastacembelus_armatus
ENSXMAG00000000866	-	58	71.600	ENSMZEG00005002583	-	89	71.600	Maylandia_zebra
ENSXMAG00000000866	-	80	59.794	ENSMMOG00000009733	-	95	70.588	Mola_mola
ENSXMAG00000000866	-	55	58.371	ENSMALG00000019991	-	96	55.731	Monopterus_albus
ENSXMAG00000000866	-	54	85.714	ENSNBRG00000008223	-	82	82.818	Neolamprologus_brichardi
ENSXMAG00000000866	-	56	81.568	ENSONIG00000017233	-	99	81.568	Oreochromis_niloticus
ENSXMAG00000000866	-	56	74.059	ENSOMEG00000016463	-	62	74.803	Oryzias_melastigma
ENSXMAG00000000866	-	56	48.409	ENSPMGG00000002384	-	88	35.385	Periophthalmus_magnuspinnatus
ENSXMAG00000000866	-	100	86.358	ENSPFOG00000006287	-	100	94.986	Poecilia_formosa
ENSXMAG00000000866	-	91	93.750	ENSPLAG00000003412	-	99	79.891	Poecilia_latipinna
ENSXMAG00000000866	-	99	93.191	ENSPMEG00000005897	-	100	85.392	Poecilia_mexicana
ENSXMAG00000000866	-	60	87.598	ENSPREG00000021246	-	99	90.551	Poecilia_reticulata
ENSXMAG00000000866	-	54	81.250	ENSPNYG00000023088	-	92	70.312	Pundamilia_nyererei
ENSXMAG00000000866	-	84	63.648	ENSSDUG00000004892	-	95	63.777	Seriola_dumerili
ENSXMAG00000000866	-	58	76.421	ENSSLDG00000005670	-	94	76.421	Seriola_lalandi_dorsalis
ENSXMAG00000000866	-	76	77.982	ENSSPAG00000022219	-	92	77.982	Stegastes_partitus
ENSXMAG00000000866	-	61	76.383	ENSTNIG00000011188	-	98	76.383	Tetraodon_nigroviridis
ENSXMAG00000000866	-	52	98.361	ENSXCOG00000012645	-	61	98.361	Xiphophorus_couchianus