EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000000954 (Gene tree)
Gene ID: 102236977
Gene Symbol: eif3d
Alias: eif3s7|wu:fb12a03
Full Name: eukaryotic translation initiation factor 3 subunit D
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 15134 bases
Position: chr16:930184-945317
Accession: 102236977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000000942	eIF-3_zeta	PF05091.12	2.9e-215	1	1
ENSXMAP00000031584	eIF-3_zeta	PF05091.12	3.9e-215	1	1
ENSXMAP00000022155	eIF-3_zeta	PF05091.12	2.1e-161	1	2
ENSXMAP00000022155	eIF-3_zeta	PF05091.12	2.1e-161	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000000945	-	1785	XM_023349503	ENSXMAP00000000942	552 (aa)	XP_023205271	M3ZFF0
ENSXMAT00000031578	-	1557	-	ENSXMAP00000022155	518 (aa)	-	-
ENSXMAT00000031693	-	1923	-	ENSXMAP00000031584	598 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000000954's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000000954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000000954	eif3d	96	91.729	ENSG00000100353	EIF3D	100	91.870	Homo_sapiens
ENSXMAG00000000954	eif3d	99	98.723	ENSAPOG00000002054	eif3d	98	98.839	Acanthochromis_polyacanthus
ENSXMAG00000000954	eif3d	96	92.293	ENSAMEG00000009639	EIF3D	97	92.293	Ailuropoda_melanoleuca
ENSXMAG00000000954	eif3d	99	97.086	ENSACIG00000013847	eif3d	98	96.383	Amphilophus_citrinellus
ENSXMAG00000000954	eif3d	100	98.732	ENSAOCG00000022455	eif3d	100	98.732	Amphiprion_ocellaris
ENSXMAG00000000954	eif3d	53	97.315	ENSAOCG00000005916	-	97	97.315	Amphiprion_ocellaris
ENSXMAG00000000954	eif3d	100	98.732	ENSAPEG00000020361	eif3d	100	98.732	Amphiprion_percula
ENSXMAG00000000954	eif3d	100	98.551	ENSATEG00000020784	eif3d	100	98.551	Anabas_testudineus
ENSXMAG00000000954	eif3d	97	85.553	ENSAPLG00000002632	EIF3D	99	85.526	Anas_platyrhynchos
ENSXMAG00000000954	eif3d	96	92.857	ENSACAG00000016308	EIF3D	97	92.857	Anolis_carolinensis
ENSXMAG00000000954	eif3d	96	91.729	ENSANAG00000026835	EIF3D	97	91.729	Aotus_nancymaae
ENSXMAG00000000954	eif3d	76	97.630	ENSACLG00000021852	eif3d	85	97.630	Astatotilapia_calliptera
ENSXMAG00000000954	eif3d	76	97.630	ENSACLG00000021768	EIF3D	85	97.630	Astatotilapia_calliptera
ENSXMAG00000000954	eif3d	76	97.630	ENSACLG00000021712	eif3d	81	97.630	Astatotilapia_calliptera
ENSXMAG00000000954	eif3d	76	97.630	ENSACLG00000021430	EIF3D	94	97.630	Astatotilapia_calliptera
ENSXMAG00000000954	eif3d	99	97.993	ENSACLG00000021167	eif3d	99	97.996	Astatotilapia_calliptera
ENSXMAG00000000954	eif3d	96	96.617	ENSAMXG00000017547	eif3d	96	96.617	Astyanax_mexicanus
ENSXMAG00000000954	eif3d	96	92.105	ENSBTAG00000001988	EIF3D	97	92.105	Bos_taurus
ENSXMAG00000000954	eif3d	99	44.406	WBGene00001227	eif-3.D	97	44.723	Caenorhabditis_elegans
ENSXMAG00000000954	eif3d	96	91.729	ENSCJAG00000013831	EIF3D	97	91.729	Callithrix_jacchus
ENSXMAG00000000954	eif3d	96	92.293	ENSCAFG00000001544	EIF3D	97	92.293	Canis_familiaris
ENSXMAG00000000954	eif3d	96	92.293	ENSCAFG00020004483	EIF3D	97	92.293	Canis_lupus_dingo
ENSXMAG00000000954	eif3d	96	92.105	ENSCHIG00000012106	EIF3D	97	92.105	Capra_hircus
ENSXMAG00000000954	eif3d	96	91.729	ENSTSYG00000008540	EIF3D	97	91.729	Carlito_syrichta
ENSXMAG00000000954	eif3d	96	89.869	ENSCAPG00000015164	EIF3D	94	89.869	Cavia_aperea
ENSXMAG00000000954	eif3d	96	91.917	ENSCPOG00000002529	EIF3D	97	91.917	Cavia_porcellus
ENSXMAG00000000954	eif3d	96	91.729	ENSCCAG00000027331	EIF3D	97	91.729	Cebus_capucinus
ENSXMAG00000000954	eif3d	96	91.729	ENSCATG00000045003	EIF3D	97	91.729	Cercocebus_atys
ENSXMAG00000000954	eif3d	96	91.917	ENSCLAG00000016545	EIF3D	97	91.917	Chinchilla_lanigera
ENSXMAG00000000954	eif3d	96	91.729	ENSCSAG00000007898	EIF3D	97	91.729	Chlorocebus_sabaeus
ENSXMAG00000000954	eif3d	96	89.850	ENSCHOG00000004811	EIF3D	97	89.850	Choloepus_hoffmanni
ENSXMAG00000000954	eif3d	96	93.421	ENSCPBG00000016309	EIF3D	97	93.421	Chrysemys_picta_bellii
ENSXMAG00000000954	eif3d	96	66.480	ENSCING00000003680	-	96	66.605	Ciona_intestinalis
ENSXMAG00000000954	eif3d	99	63.475	ENSCSAVG00000001450	-	96	64.469	Ciona_savignyi
ENSXMAG00000000954	eif3d	96	91.729	ENSCANG00000031179	EIF3D	97	91.729	Colobus_angolensis_palliatus
ENSXMAG00000000954	eif3d	96	92.105	ENSCGRG00001016584	EIF3D	97	92.105	Cricetulus_griseus_chok1gshd
ENSXMAG00000000954	eif3d	96	92.105	ENSCGRG00000000302	EIF3D	97	92.105	Cricetulus_griseus_crigri
ENSXMAG00000000954	eif3d	100	96.014	ENSCSEG00000020548	eif3d	100	96.014	Cynoglossus_semilaevis
ENSXMAG00000000954	eif3d	81	100.000	ENSCVAG00000001999	eif3d	88	100.000	Cyprinodon_variegatus
ENSXMAG00000000954	eif3d	96	96.429	ENSDARG00000021257	eif3d	100	100.000	Danio_rerio
ENSXMAG00000000954	eif3d	52	92.388	ENSDNOG00000018482	EIF3D	92	92.388	Dasypus_novemcinctus
ENSXMAG00000000954	eif3d	96	91.729	ENSDORG00000010491	Eif3d	97	91.729	Dipodomys_ordii
ENSXMAG00000000954	eif3d	98	53.888	FBgn0037994	eIF3d2	96	53.959	Drosophila_melanogaster
ENSXMAG00000000954	eif3d	95	59.586	FBgn0040227	eIF3d1	93	59.551	Drosophila_melanogaster
ENSXMAG00000000954	eif3d	60	74.439	ENSETEG00000020233	-	100	74.439	Echinops_telfairi
ENSXMAG00000000954	eif3d	85	78.167	ENSETEG00000009404	-	96	78.167	Echinops_telfairi
ENSXMAG00000000954	eif3d	94	75.763	ENSETEG00000002070	-	99	75.763	Echinops_telfairi
ENSXMAG00000000954	eif3d	84	76.738	ENSETEG00000016315	-	99	76.738	Echinops_telfairi
ENSXMAG00000000954	eif3d	88	77.433	ENSEBUG00000009405	eif3d	93	81.772	Eptatretus_burgeri
ENSXMAG00000000954	eif3d	96	92.105	ENSEASG00005018906	EIF3D	97	92.105	Equus_asinus_asinus
ENSXMAG00000000954	eif3d	96	91.541	ENSECAG00000022413	EIF3D	97	91.541	Equus_caballus
ENSXMAG00000000954	eif3d	96	82.143	ENSEEUG00000015771	EIF3D	97	82.143	Erinaceus_europaeus
ENSXMAG00000000954	eif3d	96	96.617	ENSELUG00000018698	eif3d	99	96.168	Esox_lucius
ENSXMAG00000000954	eif3d	96	92.293	ENSFCAG00000001131	EIF3D	97	92.293	Felis_catus
ENSXMAG00000000954	eif3d	96	93.233	ENSFALG00000013012	EIF3D	97	93.233	Ficedula_albicollis
ENSXMAG00000000954	eif3d	96	91.729	ENSFDAG00000004352	EIF3D	97	91.729	Fukomys_damarensis
ENSXMAG00000000954	eif3d	96	93.985	ENSGMOG00000013341	eif3d	97	93.985	Gadus_morhua
ENSXMAG00000000954	eif3d	96	93.045	ENSGALG00000012529	EIF3D	97	93.045	Gallus_gallus
ENSXMAG00000000954	eif3d	100	96.564	ENSGACG00000014538	eif3d	99	96.564	Gasterosteus_aculeatus
ENSXMAG00000000954	eif3d	96	93.421	ENSGAGG00000009617	EIF3D	97	93.421	Gopherus_agassizii
ENSXMAG00000000954	eif3d	96	91.729	ENSGGOG00000003428	EIF3D	97	91.729	Gorilla_gorilla
ENSXMAG00000000954	eif3d	100	98.007	ENSHBUG00000017230	eif3d	100	98.007	Haplochromis_burtoni
ENSXMAG00000000954	eif3d	96	77.256	ENSHGLG00000006449	-	98	77.256	Heterocephalus_glaber_female
ENSXMAG00000000954	eif3d	96	91.917	ENSHGLG00000016422	-	97	91.917	Heterocephalus_glaber_female
ENSXMAG00000000954	eif3d	96	72.932	ENSHGLG00000000135	-	96	72.932	Heterocephalus_glaber_female
ENSXMAG00000000954	eif3d	99	76.330	ENSHGLG00100001321	-	96	76.880	Heterocephalus_glaber_male
ENSXMAG00000000954	eif3d	96	91.917	ENSHGLG00100007477	-	97	91.917	Heterocephalus_glaber_male
ENSXMAG00000000954	eif3d	96	77.068	ENSHGLG00100013710	-	98	77.068	Heterocephalus_glaber_male
ENSXMAG00000000954	eif3d	100	97.283	ENSHCOG00000007799	eif3d	100	97.283	Hippocampus_comes
ENSXMAG00000000954	eif3d	96	96.429	ENSIPUG00000017267	eif3d	96	96.429	Ictalurus_punctatus
ENSXMAG00000000954	eif3d	96	92.105	ENSSTOG00000011335	EIF3D	97	92.105	Ictidomys_tridecemlineatus
ENSXMAG00000000954	eif3d	96	91.917	ENSJJAG00000010854	Eif3d	97	91.917	Jaculus_jaculus
ENSXMAG00000000954	eif3d	100	98.732	ENSKMAG00000007133	eif3d	100	98.732	Kryptolebias_marmoratus
ENSXMAG00000000954	eif3d	100	97.464	ENSLBEG00000005296	eif3d	100	97.464	Labrus_bergylta
ENSXMAG00000000954	eif3d	96	88.534	ENSLACG00000001606	EIF3D	95	88.534	Latimeria_chalumnae
ENSXMAG00000000954	eif3d	99	90.476	ENSLAFG00000001714	EIF3D	97	92.105	Loxodonta_africana
ENSXMAG00000000954	eif3d	96	91.729	ENSMFAG00000000481	EIF3D	97	91.729	Macaca_fascicularis
ENSXMAG00000000954	eif3d	96	91.729	ENSMMUG00000012754	EIF3D	97	91.729	Macaca_mulatta
ENSXMAG00000000954	eif3d	96	91.729	ENSMNEG00000012843	EIF3D	97	91.729	Macaca_nemestrina
ENSXMAG00000000954	eif3d	96	91.729	ENSMLEG00000037251	EIF3D	97	91.729	Mandrillus_leucophaeus
ENSXMAG00000000954	eif3d	100	98.732	ENSMAMG00000020219	eif3d	100	98.732	Mastacembelus_armatus
ENSXMAG00000000954	eif3d	100	98.007	ENSMZEG00005023294	eif3d	100	98.007	Maylandia_zebra
ENSXMAG00000000954	eif3d	96	93.609	ENSMZEG00005024006	eif3d	96	93.621	Maylandia_zebra
ENSXMAG00000000954	eif3d	54	93.624	ENSMGAG00000012653	EIF3D	100	93.624	Meleagris_gallopavo
ENSXMAG00000000954	eif3d	96	92.105	ENSMAUG00000013161	Eif3d	97	92.105	Mesocricetus_auratus
ENSXMAG00000000954	eif3d	96	92.105	ENSMICG00000012161	EIF3D	97	92.105	Microcebus_murinus
ENSXMAG00000000954	eif3d	96	92.293	ENSMOCG00000011605	Eif3d	97	92.293	Microtus_ochrogaster
ENSXMAG00000000954	eif3d	99	97.455	ENSMMOG00000021496	eif3d	99	97.459	Mola_mola
ENSXMAG00000000954	eif3d	96	92.669	ENSMODG00000000821	EIF3D	97	92.669	Monodelphis_domestica
ENSXMAG00000000954	eif3d	100	98.007	ENSMALG00000019436	eif3d	100	98.007	Monopterus_albus
ENSXMAG00000000954	eif3d	96	92.105	MGP_CAROLIEiJ_G0019973	Eif3d	97	92.105	Mus_caroli
ENSXMAG00000000954	eif3d	96	92.105	ENSMUSG00000016554	Eif3d	100	92.442	Mus_musculus
ENSXMAG00000000954	eif3d	96	92.105	MGP_PahariEiJ_G0019975	Eif3d	97	92.105	Mus_pahari
ENSXMAG00000000954	eif3d	96	92.105	MGP_SPRETEiJ_G0020871	Eif3d	97	92.105	Mus_spretus
ENSXMAG00000000954	eif3d	81	59.170	ENSMPUG00000012581	EIF3D	100	59.170	Mustela_putorius_furo
ENSXMAG00000000954	eif3d	96	91.729	ENSMLUG00000015857	EIF3D	97	91.729	Myotis_lucifugus
ENSXMAG00000000954	eif3d	96	91.917	ENSNGAG00000012038	Eif3d	97	91.917	Nannospalax_galili
ENSXMAG00000000954	eif3d	96	91.729	ENSNLEG00000014560	EIF3D	97	91.729	Nomascus_leucogenys
ENSXMAG00000000954	eif3d	96	92.293	ENSMEUG00000004561	EIF3D	97	92.293	Notamacropus_eugenii
ENSXMAG00000000954	eif3d	86	86.316	ENSOPRG00000006924	EIF3D	96	86.316	Ochotona_princeps
ENSXMAG00000000954	eif3d	96	91.917	ENSODEG00000011039	EIF3D	97	91.917	Octodon_degus
ENSXMAG00000000954	eif3d	100	97.826	ENSONIG00000009713	eif3d	100	97.826	Oreochromis_niloticus
ENSXMAG00000000954	eif3d	97	81.022	ENSOANG00000007483	EIF3D	99	80.987	Ornithorhynchus_anatinus
ENSXMAG00000000954	eif3d	96	91.917	ENSOCUG00000006363	EIF3D	97	91.917	Oryctolagus_cuniculus
ENSXMAG00000000954	eif3d	97	94.944	ENSORLG00000001449	eif3d	96	94.934	Oryzias_latipes
ENSXMAG00000000954	eif3d	100	96.745	ENSORLG00020000383	eif3d	99	96.745	Oryzias_latipes_hni
ENSXMAG00000000954	eif3d	52	94.118	ENSORLG00020013943	eif3d	99	92.568	Oryzias_latipes_hni
ENSXMAG00000000954	eif3d	55	90.759	ENSORLG00015006954	eif3d	99	90.759	Oryzias_latipes_hsok
ENSXMAG00000000954	eif3d	52	97.232	ENSORLG00015006930	eif3d	90	97.232	Oryzias_latipes_hsok
ENSXMAG00000000954	eif3d	52	92.734	ENSOMEG00000017337	eif3d	95	92.734	Oryzias_melastigma
ENSXMAG00000000954	eif3d	52	92.388	ENSOMEG00000017372	eif3d	95	92.388	Oryzias_melastigma
ENSXMAG00000000954	eif3d	96	91.729	ENSOGAG00000002978	EIF3D	97	91.729	Otolemur_garnettii
ENSXMAG00000000954	eif3d	96	92.105	ENSOARG00000018926	EIF3D	97	92.105	Ovis_aries
ENSXMAG00000000954	eif3d	96	91.729	ENSPPAG00000031183	EIF3D	97	91.729	Pan_paniscus
ENSXMAG00000000954	eif3d	96	92.293	ENSPPRG00000007244	EIF3D	97	92.293	Panthera_pardus
ENSXMAG00000000954	eif3d	96	91.165	ENSPTIG00000012272	EIF3D	96	91.165	Panthera_tigris_altaica
ENSXMAG00000000954	eif3d	96	91.729	ENSPTRG00000014313	EIF3D	97	91.729	Pan_troglodytes
ENSXMAG00000000954	eif3d	96	91.729	ENSPANG00000023980	EIF3D	97	91.729	Papio_anubis
ENSXMAG00000000954	eif3d	100	96.558	ENSPKIG00000013892	eif3d	100	96.558	Paramormyrops_kingsleyae
ENSXMAG00000000954	eif3d	96	93.609	ENSPSIG00000010983	EIF3D	97	93.609	Pelodiscus_sinensis
ENSXMAG00000000954	eif3d	94	92.843	ENSPMGG00000004524	eif3d	98	92.843	Periophthalmus_magnuspinnatus
ENSXMAG00000000954	eif3d	96	92.105	ENSPEMG00000014069	Eif3d	97	92.105	Peromyscus_maniculatus_bairdii
ENSXMAG00000000954	eif3d	52	80.822	ENSPMAG00000008165	eif3d	97	80.822	Petromyzon_marinus
ENSXMAG00000000954	eif3d	96	92.293	ENSPCIG00000021563	EIF3D	97	92.293	Phascolarctos_cinereus
ENSXMAG00000000954	eif3d	100	99.638	ENSPFOG00000007516	eif3d	100	99.638	Poecilia_formosa
ENSXMAG00000000954	eif3d	100	99.638	ENSPLAG00000015253	eif3d	100	99.638	Poecilia_latipinna
ENSXMAG00000000954	eif3d	100	99.457	ENSPMEG00000019987	eif3d	100	99.457	Poecilia_mexicana
ENSXMAG00000000954	eif3d	96	83.835	ENSPPYG00000011774	EIF3D	97	84.023	Pongo_abelii
ENSXMAG00000000954	eif3d	83	94.488	ENSPCAG00000007788	EIF3D	83	94.488	Procavia_capensis
ENSXMAG00000000954	eif3d	96	87.782	ENSPCOG00000014552	EIF3D	96	87.782	Propithecus_coquereli
ENSXMAG00000000954	eif3d	96	91.917	ENSPVAG00000002014	EIF3D	97	91.917	Pteropus_vampyrus
ENSXMAG00000000954	eif3d	100	97.826	ENSPNYG00000011917	eif3d	100	97.826	Pundamilia_nyererei
ENSXMAG00000000954	eif3d	96	96.429	ENSPNAG00000000176	eif3d	96	96.429	Pygocentrus_nattereri
ENSXMAG00000000954	eif3d	96	92.105	ENSRNOG00000005804	Eif3d	97	92.105	Rattus_norvegicus
ENSXMAG00000000954	eif3d	96	91.729	ENSRBIG00000041563	EIF3D	97	91.729	Rhinopithecus_bieti
ENSXMAG00000000954	eif3d	96	91.729	ENSRROG00000039588	EIF3D	97	91.729	Rhinopithecus_roxellana
ENSXMAG00000000954	eif3d	96	91.729	ENSSBOG00000032811	EIF3D	97	91.729	Saimiri_boliviensis_boliviensis
ENSXMAG00000000954	eif3d	96	92.481	ENSSHAG00000011209	EIF3D	97	92.481	Sarcophilus_harrisii
ENSXMAG00000000954	eif3d	100	96.558	ENSSFOG00015023800	eif3d	100	96.558	Scleropages_formosus
ENSXMAG00000000954	eif3d	99	96.915	ENSSMAG00000013962	eif3d	99	97.091	Scophthalmus_maximus
ENSXMAG00000000954	eif3d	100	97.826	ENSSDUG00000023224	eif3d	100	97.826	Seriola_dumerili
ENSXMAG00000000954	eif3d	100	97.826	ENSSLDG00000006833	eif3d	100	97.826	Seriola_lalandi_dorsalis
ENSXMAG00000000954	eif3d	86	81.263	ENSSARG00000012488	EIF3D	97	81.263	Sorex_araneus
ENSXMAG00000000954	eif3d	96	92.293	ENSSPUG00000011683	EIF3D	97	92.293	Sphenodon_punctatus
ENSXMAG00000000954	eif3d	100	98.732	ENSSPAG00000003591	eif3d	100	98.732	Stegastes_partitus
ENSXMAG00000000954	eif3d	96	92.105	ENSSSCG00000000141	EIF3D	97	92.105	Sus_scrofa
ENSXMAG00000000954	eif3d	96	93.045	ENSTGUG00000010728	EIF3D	97	93.045	Taeniopygia_guttata
ENSXMAG00000000954	eif3d	100	97.107	ENSTRUG00000007886	eif3d	100	97.107	Takifugu_rubripes
ENSXMAG00000000954	eif3d	99	95.281	ENSTNIG00000011263	eif3d	100	96.958	Tetraodon_nigroviridis
ENSXMAG00000000954	eif3d	89	91.853	ENSTBEG00000006268	EIF3D	96	91.853	Tupaia_belangeri
ENSXMAG00000000954	eif3d	96	91.353	ENSTTRG00000006637	EIF3D	97	91.353	Tursiops_truncatus
ENSXMAG00000000954	eif3d	96	92.293	ENSUAMG00000017485	EIF3D	97	92.293	Ursus_americanus
ENSXMAG00000000954	eif3d	96	92.293	ENSUMAG00000015827	EIF3D	97	92.293	Ursus_maritimus
ENSXMAG00000000954	eif3d	53	85.567	ENSVPAG00000000359	-	100	85.567	Vicugna_pacos
ENSXMAG00000000954	eif3d	96	92.293	ENSVVUG00000023578	EIF3D	97	92.293	Vulpes_vulpes
ENSXMAG00000000954	eif3d	96	91.165	ENSXETG00000027259	eif3d	96	91.165	Xenopus_tropicalis
ENSXMAG00000000954	eif3d	96	89.474	ENSXCOG00000011633	eif3d	97	89.474	Xiphophorus_couchianus