EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000000988 (Gene tree)
Gene ID: 102226738
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 2360 bases
Position: chr8:9211874-9214233
Accession: 102226738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000000981	PseudoU_synth_1	PF01416.20	2.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000000984	-	1254	XM_005799644	ENSXMAP00000000981	417 (aa)	XP_005799701	M3ZFI9

Gene Model

Click here to download ENSXMAG00000000988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000000988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000000988	pus1	89	66.935	ENSG00000177192	PUS1	91	69.516	Homo_sapiens
ENSXMAG00000000988	pus1	100	84.798	ENSAPOG00000007254	pus1	100	84.798	Acanthochromis_polyacanthus
ENSXMAG00000000988	pus1	90	65.517	ENSAMEG00000013715	PUS1	91	65.517	Ailuropoda_melanoleuca
ENSXMAG00000000988	pus1	100	80.668	ENSACIG00000009169	pus1	100	80.668	Amphilophus_citrinellus
ENSXMAG00000000988	pus1	100	86.223	ENSAOCG00000022207	pus1	100	86.223	Amphiprion_ocellaris
ENSXMAG00000000988	pus1	100	85.986	ENSAPEG00000006039	pus1	99	87.468	Amphiprion_percula
ENSXMAG00000000988	pus1	93	85.422	ENSATEG00000020688	pus1	100	85.422	Anabas_testudineus
ENSXMAG00000000988	pus1	82	71.930	ENSACAG00000007367	PUS1	91	71.930	Anolis_carolinensis
ENSXMAG00000000988	pus1	78	68.807	ENSANAG00000036192	PUS1	100	68.807	Aotus_nancymaae
ENSXMAG00000000988	pus1	100	85.036	ENSACLG00000020868	pus1	100	86.445	Astatotilapia_calliptera
ENSXMAG00000000988	pus1	96	72.070	ENSAMXG00000008710	pus1	92	72.070	Astyanax_mexicanus
ENSXMAG00000000988	pus1	95	62.250	ENSBTAG00000012990	PUS1	99	62.250	Bos_taurus
ENSXMAG00000000988	pus1	82	38.268	WBGene00004248	pus-1	85	38.268	Caenorhabditis_elegans
ENSXMAG00000000988	pus1	61	69.291	ENSCJAG00000003720	PUS1	75	65.468	Callithrix_jacchus
ENSXMAG00000000988	pus1	88	66.486	ENSCAFG00000006429	PUS1	87	69.628	Canis_familiaris
ENSXMAG00000000988	pus1	83	69.628	ENSCAFG00020010737	PUS1	81	69.628	Canis_lupus_dingo
ENSXMAG00000000988	pus1	95	62.750	ENSCHIG00000000487	PUS1	99	62.750	Capra_hircus
ENSXMAG00000000988	pus1	82	70.760	ENSTSYG00000032605	PUS1	99	67.568	Carlito_syrichta
ENSXMAG00000000988	pus1	72	71.906	ENSCAPG00000006421	PUS1	99	68.210	Cavia_aperea
ENSXMAG00000000988	pus1	82	68.713	ENSCPOG00000001027	PUS1	87	64.865	Cavia_porcellus
ENSXMAG00000000988	pus1	82	69.298	ENSCCAG00000015879	PUS1	99	60.187	Cebus_capucinus
ENSXMAG00000000988	pus1	83	69.075	ENSCATG00000032870	PUS1	83	72.368	Cercocebus_atys
ENSXMAG00000000988	pus1	93	62.725	ENSCLAG00000011689	PUS1	98	59.712	Chinchilla_lanigera
ENSXMAG00000000988	pus1	84	68.451	ENSCSAG00000001879	PUS1	83	68.451	Chlorocebus_sabaeus
ENSXMAG00000000988	pus1	75	72.611	ENSCPBG00000024715	PUS1	93	70.336	Chrysemys_picta_bellii
ENSXMAG00000000988	pus1	82	44.606	ENSCING00000009426	-	91	44.606	Ciona_intestinalis
ENSXMAG00000000988	pus1	76	44.201	ENSCSAVG00000003751	-	66	44.201	Ciona_savignyi
ENSXMAG00000000988	pus1	88	59.946	ENSCANG00000035561	PUS1	89	62.918	Colobus_angolensis_palliatus
ENSXMAG00000000988	pus1	86	68.056	ENSCGRG00001019592	Pus1	84	68.056	Cricetulus_griseus_chok1gshd
ENSXMAG00000000988	pus1	86	68.056	ENSCGRG00000004048	Pus1	91	68.056	Cricetulus_griseus_crigri
ENSXMAG00000000988	pus1	100	75.297	ENSCSEG00000003629	pus1	100	75.297	Cynoglossus_semilaevis
ENSXMAG00000000988	pus1	100	88.489	ENSCVAG00000001265	pus1	100	88.489	Cyprinodon_variegatus
ENSXMAG00000000988	pus1	92	68.407	ENSDARG00000045562	pus1	97	76.471	Danio_rerio
ENSXMAG00000000988	pus1	85	67.232	ENSDNOG00000045576	PUS1	99	67.791	Dasypus_novemcinctus
ENSXMAG00000000988	pus1	78	69.753	ENSDORG00000011455	Pus1	99	69.753	Dipodomys_ordii
ENSXMAG00000000988	pus1	82	46.724	FBgn0038811	PUS1	84	46.724	Drosophila_melanogaster
ENSXMAG00000000988	pus1	82	69.006	ENSETEG00000019160	PUS1	85	67.908	Echinops_telfairi
ENSXMAG00000000988	pus1	82	44.628	ENSEBUG00000000368	-	68	44.536	Eptatretus_burgeri
ENSXMAG00000000988	pus1	83	68.876	ENSEASG00005016535	PUS1	80	68.876	Equus_asinus_asinus
ENSXMAG00000000988	pus1	83	68.876	ENSECAG00000006965	PUS1	87	68.876	Equus_caballus
ENSXMAG00000000988	pus1	93	75.448	ENSELUG00000010424	pus1	99	75.448	Esox_lucius
ENSXMAG00000000988	pus1	83	68.497	ENSFCAG00000010780	PUS1	81	69.096	Felis_catus
ENSXMAG00000000988	pus1	99	62.529	ENSFALG00000008273	PUS1	98	62.529	Ficedula_albicollis
ENSXMAG00000000988	pus1	88	66.033	ENSFDAG00000012518	PUS1	88	67.493	Fukomys_damarensis
ENSXMAG00000000988	pus1	100	90.431	ENSFHEG00000010504	pus1	100	90.431	Fundulus_heteroclitus
ENSXMAG00000000988	pus1	94	75.192	ENSGMOG00000008143	pus1	99	75.192	Gadus_morhua
ENSXMAG00000000988	pus1	90	67.895	ENSGALG00000002354	PUS1	93	67.895	Gallus_gallus
ENSXMAG00000000988	pus1	100	97.602	ENSGAFG00000006578	pus1	100	97.602	Gambusia_affinis
ENSXMAG00000000988	pus1	100	82.660	ENSGACG00000017566	pus1	99	84.655	Gasterosteus_aculeatus
ENSXMAG00000000988	pus1	79	69.301	ENSGAGG00000016730	-	94	69.301	Gopherus_agassizii
ENSXMAG00000000988	pus1	61	30.314	ENSGAGG00000000160	PUS3	52	30.314	Gopherus_agassizii
ENSXMAG00000000988	pus1	92	65.625	ENSGGOG00000009178	PUS1	87	69.632	Gorilla_gorilla
ENSXMAG00000000988	pus1	100	85.511	ENSHBUG00000001316	pus1	100	86.957	Haplochromis_burtoni
ENSXMAG00000000988	pus1	88	64.305	ENSHGLG00000016086	PUS1	93	64.305	Heterocephalus_glaber_female
ENSXMAG00000000988	pus1	68	30.284	ENSHGLG00000015753	-	80	30.284	Heterocephalus_glaber_female
ENSXMAG00000000988	pus1	88	64.033	ENSHGLG00100019362	PUS1	93	64.033	Heterocephalus_glaber_male
ENSXMAG00000000988	pus1	100	76.134	ENSHCOG00000014288	pus1	96	76.134	Hippocampus_comes
ENSXMAG00000000988	pus1	93	75.452	ENSIPUG00000010387	pus1	91	78.630	Ictalurus_punctatus
ENSXMAG00000000988	pus1	84	67.887	ENSSTOG00000011245	PUS1	87	65.591	Ictidomys_tridecemlineatus
ENSXMAG00000000988	pus1	88	66.485	ENSJJAG00000000088	Pus1	86	66.485	Jaculus_jaculus
ENSXMAG00000000988	pus1	100	79.810	ENSKMAG00000012702	pus1	100	79.810	Kryptolebias_marmoratus
ENSXMAG00000000988	pus1	95	82.915	ENSLBEG00000002845	pus1	98	82.915	Labrus_bergylta
ENSXMAG00000000988	pus1	89	66.053	ENSLACG00000018598	PUS1	99	64.232	Latimeria_chalumnae
ENSXMAG00000000988	pus1	78	57.407	ENSLACG00000016044	-	98	57.407	Latimeria_chalumnae
ENSXMAG00000000988	pus1	91	68.571	ENSLOCG00000006127	pus1	97	68.571	Lepisosteus_oculatus
ENSXMAG00000000988	pus1	84	67.330	ENSLAFG00000028731	PUS1	94	67.330	Loxodonta_africana
ENSXMAG00000000988	pus1	84	69.628	ENSMFAG00000041194	PUS1	83	72.697	Macaca_fascicularis
ENSXMAG00000000988	pus1	83	69.364	ENSMMUG00000031463	PUS1	87	72.697	Macaca_mulatta
ENSXMAG00000000988	pus1	83	69.364	ENSMNEG00000002814	PUS1	83	72.697	Macaca_nemestrina
ENSXMAG00000000988	pus1	73	72.697	ENSMLEG00000043560	PUS1	92	72.848	Mandrillus_leucophaeus
ENSXMAG00000000988	pus1	100	84.798	ENSMAMG00000007371	pus1	100	84.798	Mastacembelus_armatus
ENSXMAG00000000988	pus1	100	85.036	ENSMZEG00005017746	pus1	100	85.036	Maylandia_zebra
ENSXMAG00000000988	pus1	77	72.755	ENSMGAG00000001958	PUS1	98	72.755	Meleagris_gallopavo
ENSXMAG00000000988	pus1	88	67.847	ENSMAUG00000001482	Pus1	86	67.847	Mesocricetus_auratus
ENSXMAG00000000988	pus1	88	66.845	ENSMICG00000030980	PUS1	92	66.845	Microcebus_murinus
ENSXMAG00000000988	pus1	90	66.578	ENSMOCG00000022311	Pus1	87	66.578	Microtus_ochrogaster
ENSXMAG00000000988	pus1	93	79.177	ENSMMOG00000021022	pus1	99	79.177	Mola_mola
ENSXMAG00000000988	pus1	82	69.096	ENSMODG00000015551	PUS1	82	66.940	Monodelphis_domestica
ENSXMAG00000000988	pus1	99	81.905	ENSMALG00000013202	pus1	99	81.905	Monopterus_albus
ENSXMAG00000000988	pus1	88	67.847	MGP_CAROLIEiJ_G0027551	Pus1	93	67.847	Mus_caroli
ENSXMAG00000000988	pus1	88	67.847	ENSMUSG00000029507	Pus1	93	67.847	Mus_musculus
ENSXMAG00000000988	pus1	87	68.407	MGP_PahariEiJ_G0024133	Pus1	92	68.407	Mus_pahari
ENSXMAG00000000988	pus1	88	67.847	MGP_SPRETEiJ_G0028549	Pus1	93	67.847	Mus_spretus
ENSXMAG00000000988	pus1	84	69.341	ENSMPUG00000002314	PUS1	88	69.341	Mustela_putorius_furo
ENSXMAG00000000988	pus1	87	65.746	ENSMLUG00000015790	PUS1	99	65.746	Myotis_lucifugus
ENSXMAG00000000988	pus1	86	68.595	ENSNGAG00000012976	Pus1	87	67.297	Nannospalax_galili
ENSXMAG00000000988	pus1	93	87.212	ENSNBRG00000020502	pus1	99	88.503	Neolamprologus_brichardi
ENSXMAG00000000988	pus1	88	65.123	ENSNLEG00000008505	PUS1	99	69.524	Nomascus_leucogenys
ENSXMAG00000000988	pus1	82	62.791	ENSMEUG00000002825	PUS1	92	62.791	Notamacropus_eugenii
ENSXMAG00000000988	pus1	83	60.231	ENSOPRG00000002701	-	91	60.231	Ochotona_princeps
ENSXMAG00000000988	pus1	83	69.075	ENSODEG00000008248	PUS1	91	69.075	Octodon_degus
ENSXMAG00000000988	pus1	94	85.642	ENSONIG00000003803	pus1	100	85.642	Oreochromis_niloticus
ENSXMAG00000000988	pus1	87	67.209	ENSOANG00000010619	PUS1	86	66.313	Ornithorhynchus_anatinus
ENSXMAG00000000988	pus1	86	67.688	ENSOCUG00000007310	PUS1	78	67.218	Oryctolagus_cuniculus
ENSXMAG00000000988	pus1	100	81.429	ENSORLG00000010787	pus1	100	81.429	Oryzias_latipes
ENSXMAG00000000988	pus1	100	81.667	ENSORLG00020011483	pus1	100	81.667	Oryzias_latipes_hni
ENSXMAG00000000988	pus1	100	81.667	ENSORLG00015023012	pus1	99	84.278	Oryzias_latipes_hsok
ENSXMAG00000000988	pus1	98	81.174	ENSOMEG00000022655	pus1	96	81.174	Oryzias_melastigma
ENSXMAG00000000988	pus1	82	70.262	ENSOGAG00000008720	PUS1	96	67.385	Otolemur_garnettii
ENSXMAG00000000988	pus1	95	62.500	ENSOARG00000013316	PUS1	92	62.500	Ovis_aries
ENSXMAG00000000988	pus1	89	67.204	ENSPPAG00000040971	PUS1	87	69.939	Pan_paniscus
ENSXMAG00000000988	pus1	83	68.497	ENSPPRG00000015456	PUS1	87	68.497	Panthera_pardus
ENSXMAG00000000988	pus1	82	68.513	ENSPTIG00000004201	PUS1	90	68.497	Panthera_tigris_altaica
ENSXMAG00000000988	pus1	89	67.473	ENSPTRG00000005643	PUS1	87	70.245	Pan_troglodytes
ENSXMAG00000000988	pus1	83	69.364	ENSPANG00000000376	PUS1	83	72.697	Papio_anubis
ENSXMAG00000000988	pus1	91	67.277	ENSPKIG00000019369	pus1	87	66.839	Paramormyrops_kingsleyae
ENSXMAG00000000988	pus1	98	63.350	ENSPSIG00000016432	PUS1	96	63.373	Pelodiscus_sinensis
ENSXMAG00000000988	pus1	88	80.926	ENSPMGG00000004522	pus1	95	80.926	Periophthalmus_magnuspinnatus
ENSXMAG00000000988	pus1	88	67.575	ENSPEMG00000013448	Pus1	86	67.575	Peromyscus_maniculatus_bairdii
ENSXMAG00000000988	pus1	79	59.878	ENSPMAG00000004636	pus1	99	59.878	Petromyzon_marinus
ENSXMAG00000000988	pus1	73	61.716	ENSPCIG00000022609	-	75	59.365	Phascolarctos_cinereus
ENSXMAG00000000988	pus1	100	96.403	ENSPFOG00000019669	pus1	100	96.403	Poecilia_formosa
ENSXMAG00000000988	pus1	100	96.163	ENSPLAG00000002692	-	100	96.163	Poecilia_latipinna
ENSXMAG00000000988	pus1	100	96.163	ENSPLAG00000007185	pus1	100	96.163	Poecilia_latipinna
ENSXMAG00000000988	pus1	100	96.163	ENSPMEG00000011115	PUS1	100	96.163	Poecilia_mexicana
ENSXMAG00000000988	pus1	98	96.314	ENSPMEG00000006038	pus1	99	96.314	Poecilia_mexicana
ENSXMAG00000000988	pus1	95	96.212	ENSPREG00000007231	pus1	99	96.379	Poecilia_reticulata
ENSXMAG00000000988	pus1	89	66.935	ENSPPYG00000005132	PUS1	87	66.935	Pongo_abelii
ENSXMAG00000000988	pus1	64	66.541	ENSPCAG00000009110	-	65	66.541	Procavia_capensis
ENSXMAG00000000988	pus1	76	66.144	ENSPCOG00000015595	PUS1	91	60.541	Propithecus_coquereli
ENSXMAG00000000988	pus1	100	85.036	ENSPNYG00000013571	pus1	100	85.036	Pundamilia_nyererei
ENSXMAG00000000988	pus1	99	69.952	ENSPNAG00000003938	pus1	96	69.952	Pygocentrus_nattereri
ENSXMAG00000000988	pus1	88	67.302	ENSRNOG00000037500	Pus1	86	67.302	Rattus_norvegicus
ENSXMAG00000000988	pus1	88	67.030	ENSRBIG00000043177	PUS1	90	69.632	Rhinopithecus_bieti
ENSXMAG00000000988	pus1	89	67.297	ENSRROG00000039744	PUS1	88	69.205	Rhinopithecus_roxellana
ENSXMAG00000000988	pus1	80	42.667	YPL212C	-	63	41.358	Saccharomyces_cerevisiae
ENSXMAG00000000988	pus1	88	66.216	ENSSBOG00000023593	PUS1	93	68.405	Saimiri_boliviensis_boliviensis
ENSXMAG00000000988	pus1	87	67.582	ENSSHAG00000013193	PUS1	86	67.582	Sarcophilus_harrisii
ENSXMAG00000000988	pus1	93	68.514	ENSSFOG00015003463	pus1	93	67.237	Scleropages_formosus
ENSXMAG00000000988	pus1	100	81.235	ENSSMAG00000019075	pus1	100	81.235	Scophthalmus_maximus
ENSXMAG00000000988	pus1	100	83.373	ENSSDUG00000007102	pus1	100	83.373	Seriola_dumerili
ENSXMAG00000000988	pus1	100	82.898	ENSSLDG00000022850	pus1	100	82.898	Seriola_lalandi_dorsalis
ENSXMAG00000000988	pus1	72	63.576	ENSSARG00000008367	PUS1	98	63.366	Sorex_araneus
ENSXMAG00000000988	pus1	93	66.000	ENSSPUG00000010009	PUS1	99	66.000	Sphenodon_punctatus
ENSXMAG00000000988	pus1	93	84.399	ENSSPAG00000006272	pus1	99	84.399	Stegastes_partitus
ENSXMAG00000000988	pus1	88	67.027	ENSSSCG00000009741	PUS1	92	67.027	Sus_scrofa
ENSXMAG00000000988	pus1	79	73.030	ENSTGUG00000008068	PUS1	99	73.030	Taeniopygia_guttata
ENSXMAG00000000988	pus1	90	77.719	ENSTRUG00000002198	pus1	94	77.719	Takifugu_rubripes
ENSXMAG00000000988	pus1	93	73.402	ENSTNIG00000003942	pus1	98	73.913	Tetraodon_nigroviridis
ENSXMAG00000000988	pus1	89	65.054	ENSTTRG00000000632	PUS1	87	65.054	Tursiops_truncatus
ENSXMAG00000000988	pus1	84	68.768	ENSUAMG00000017197	PUS1	88	68.768	Ursus_americanus
ENSXMAG00000000988	pus1	84	68.768	ENSUMAG00000002831	PUS1	95	72.327	Ursus_maritimus
ENSXMAG00000000988	pus1	83	69.741	ENSVVUG00000004199	PUS1	79	69.741	Vulpes_vulpes
ENSXMAG00000000988	pus1	91	65.526	ENSXETG00000002030	pus1	94	65.526	Xenopus_tropicalis
ENSXMAG00000000988	pus1	76	49.226	ENSXETG00000033640	-	99	49.226	Xenopus_tropicalis
ENSXMAG00000000988	pus1	95	99.242	ENSXCOG00000004722	pus1	98	99.242	Xiphophorus_couchianus