EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001133 (Gene tree)
Gene ID: 102228353
Gene Symbol: snrpd3l
Alias: wu:fa18f04|zgc:56125
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 3820 bases
Position: chr8:9082591-9086410
Accession: 102228353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000001128	LSM	PF01423.22	1.4e-15	1	1
ENSXMAP00000038178	LSM	PF01423.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000040615	-	804	XM_005799651	ENSXMAP00000038178	127 (aa)	XP_005799708	UPI0000337BC1
ENSXMAT00000001131	-	846	-	ENSXMAP00000001128	127 (aa)	-	M3ZFY6

Gene Model

Click here to download ENSXMAG00000001133's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001133's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001133	snrpd3l	100	98.425	ENSG00000100028	SNRPD3	100	98.425	Homo_sapiens
ENSXMAG00000001133	snrpd3l	100	99.213	ENSAPOG00000007512	snrpd3l	100	99.213	Acanthochromis_polyacanthus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSAMEG00000013935	SNRPD3	100	98.425	Ailuropoda_melanoleuca
ENSXMAG00000001133	snrpd3l	100	99.213	ENSACIG00000008871	snrpd3l	100	99.213	Amphilophus_citrinellus
ENSXMAG00000001133	snrpd3l	100	99.213	ENSAOCG00000016743	snrpd3l	100	99.213	Amphiprion_ocellaris
ENSXMAG00000001133	snrpd3l	83	100.000	ENSAOCG00000016759	-	98	100.000	Amphiprion_ocellaris
ENSXMAG00000001133	snrpd3l	100	99.213	ENSAOCG00000008497	SNRPD3	100	99.213	Amphiprion_ocellaris
ENSXMAG00000001133	snrpd3l	100	99.213	ENSAOCG00000022442	-	100	99.213	Amphiprion_ocellaris
ENSXMAG00000001133	snrpd3l	100	99.213	ENSAPEG00000006273	snrpd3l	100	99.213	Amphiprion_percula
ENSXMAG00000001133	snrpd3l	83	100.000	ENSAPEG00000006260	-	98	100.000	Amphiprion_percula
ENSXMAG00000001133	snrpd3l	100	99.213	ENSATEG00000020556	snrpd3l	91	99.213	Anabas_testudineus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSAPLG00000008670	SNRPD3	100	98.425	Anas_platyrhynchos
ENSXMAG00000001133	snrpd3l	100	98.425	ENSANAG00000026106	SNRPD3	100	98.425	Aotus_nancymaae
ENSXMAG00000001133	snrpd3l	100	99.213	ENSACLG00000021295	snrpd3l	100	99.213	Astatotilapia_calliptera
ENSXMAG00000001133	snrpd3l	100	96.875	ENSAMXG00000038984	snrpd3l	100	96.875	Astyanax_mexicanus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSBTAG00000021262	SNRPD3	100	98.425	Bos_taurus
ENSXMAG00000001133	snrpd3l	90	63.478	WBGene00004914	snr-1	68	69.565	Caenorhabditis_elegans
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCJAG00000009630	SNRPD3	100	98.425	Callithrix_jacchus
ENSXMAG00000001133	snrpd3l	100	97.638	ENSCAFG00000017258	-	100	97.638	Canis_familiaris
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCAFG00000013864	-	100	98.425	Canis_familiaris
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCAFG00020007165	-	100	98.425	Canis_lupus_dingo
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCHIG00000000057	SNRPD3	100	98.425	Capra_hircus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSTSYG00000007649	SNRPD3	100	98.425	Carlito_syrichta
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCAPG00000016432	-	100	98.425	Cavia_aperea
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCPOG00000033102	-	100	98.425	Cavia_porcellus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCCAG00000035006	SNRPD3	100	98.425	Cebus_capucinus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCATG00000038878	SNRPD3	100	98.425	Cercocebus_atys
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCLAG00000011403	SNRPD3	100	98.425	Chinchilla_lanigera
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCSAG00000010694	SNRPD3	100	98.425	Chlorocebus_sabaeus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCPBG00000002065	SNRPD3	100	98.425	Chrysemys_picta_bellii
ENSXMAG00000001133	snrpd3l	84	79.439	ENSCSAVG00000004708	-	80	79.439	Ciona_savignyi
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCANG00000032106	SNRPD3	100	98.425	Colobus_angolensis_palliatus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCGRG00001021990	Snrpd3	100	98.425	Cricetulus_griseus_chok1gshd
ENSXMAG00000001133	snrpd3l	100	98.425	ENSCGRG00000004280	Snrpd3	100	98.425	Cricetulus_griseus_crigri
ENSXMAG00000001133	snrpd3l	100	99.213	ENSCVAG00000001276	snrpd3l	100	99.213	Cyprinodon_variegatus
ENSXMAG00000001133	snrpd3l	100	96.875	ENSDARG00000076283	snrpd3l	100	96.875	Danio_rerio
ENSXMAG00000001133	snrpd3l	100	95.276	ENSDARG00000013800	snrpd3	100	95.276	Danio_rerio
ENSXMAG00000001133	snrpd3l	100	98.425	ENSDNOG00000047424	-	100	98.425	Dasypus_novemcinctus
ENSXMAG00000001133	snrpd3l	97	76.423	ENSDNOG00000042638	-	100	73.984	Dasypus_novemcinctus
ENSXMAG00000001133	snrpd3l	100	88.462	ENSDNOG00000018004	-	100	86.154	Dasypus_novemcinctus
ENSXMAG00000001133	snrpd3l	100	73.228	ENSDORG00000027169	-	100	69.291	Dipodomys_ordii
ENSXMAG00000001133	snrpd3l	87	90.090	ENSDORG00000002800	-	100	86.486	Dipodomys_ordii
ENSXMAG00000001133	snrpd3l	100	83.465	ENSDORG00000027706	-	100	81.102	Dipodomys_ordii
ENSXMAG00000001133	snrpd3l	83	83.962	FBgn0023167	SmD3	71	83.178	Drosophila_melanogaster
ENSXMAG00000001133	snrpd3l	100	98.425	ENSEASG00005000273	SNRPD3	100	98.425	Equus_asinus_asinus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSECAG00000023316	SNRPD3	100	98.425	Equus_caballus
ENSXMAG00000001133	snrpd3l	100	97.638	ENSEEUG00000015518	SNRPD3	100	97.638	Erinaceus_europaeus
ENSXMAG00000001133	snrpd3l	100	96.850	ENSELUG00000001854	snrpd3	100	96.850	Esox_lucius
ENSXMAG00000001133	snrpd3l	100	100.000	ENSELUG00000010092	snrpd3l	100	100.000	Esox_lucius
ENSXMAG00000001133	snrpd3l	100	98.425	ENSFCAG00000001512	SNRPD3	100	98.425	Felis_catus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSFALG00000007303	SNRPD3	100	98.425	Ficedula_albicollis
ENSXMAG00000001133	snrpd3l	100	98.425	ENSFDAG00000010772	SNRPD3	100	98.425	Fukomys_damarensis
ENSXMAG00000001133	snrpd3l	100	100.000	ENSFHEG00000010754	snrpd3l	100	100.000	Fundulus_heteroclitus
ENSXMAG00000001133	snrpd3l	100	98.438	ENSGMOG00000008469	snrpd3l	100	98.438	Gadus_morhua
ENSXMAG00000001133	snrpd3l	100	98.425	ENSGALG00000006596	SNRPD3	100	98.425	Gallus_gallus
ENSXMAG00000001133	snrpd3l	83	100.000	ENSGAFG00000006661	snrpd3l	82	100.000	Gambusia_affinis
ENSXMAG00000001133	snrpd3l	100	98.438	ENSGACG00000017533	snrpd3l	100	98.438	Gasterosteus_aculeatus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSGAGG00000023325	SNRPD3	100	98.425	Gopherus_agassizii
ENSXMAG00000001133	snrpd3l	100	98.425	ENSGGOG00000015640	SNRPD3	100	98.425	Gorilla_gorilla
ENSXMAG00000001133	snrpd3l	100	99.213	ENSHBUG00000001332	snrpd3l	100	99.213	Haplochromis_burtoni
ENSXMAG00000001133	snrpd3l	100	98.425	ENSHGLG00000016496	SNRPD3	100	98.425	Heterocephalus_glaber_female
ENSXMAG00000001133	snrpd3l	99	95.238	ENSHGLG00000009844	-	99	91.270	Heterocephalus_glaber_female
ENSXMAG00000001133	snrpd3l	99	95.238	ENSHGLG00100011326	-	99	91.270	Heterocephalus_glaber_male
ENSXMAG00000001133	snrpd3l	100	98.425	ENSHGLG00100019304	SNRPD3	100	98.425	Heterocephalus_glaber_male
ENSXMAG00000001133	snrpd3l	100	98.425	ENSHCOG00000014396	snrpd3l	100	98.425	Hippocampus_comes
ENSXMAG00000001133	snrpd3l	100	96.875	ENSIPUG00000003083	snrpd3	100	96.875	Ictalurus_punctatus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSSTOG00000025674	SNRPD3	100	98.425	Ictidomys_tridecemlineatus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSJJAG00000013303	Snrpd3	100	98.425	Jaculus_jaculus
ENSXMAG00000001133	snrpd3l	100	100.000	ENSKMAG00000012493	snrpd3l	100	100.000	Kryptolebias_marmoratus
ENSXMAG00000001133	snrpd3l	100	99.213	ENSLBEG00000003202	snrpd3l	100	99.213	Labrus_bergylta
ENSXMAG00000001133	snrpd3l	100	97.638	ENSLACG00000015192	SNRPD3	100	97.638	Latimeria_chalumnae
ENSXMAG00000001133	snrpd3l	100	99.213	ENSLOCG00000006978	snrpd3	100	99.213	Lepisosteus_oculatus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSLAFG00000028180	SNRPD3	100	98.425	Loxodonta_africana
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMFAG00000033628	SNRPD3	100	98.425	Macaca_fascicularis
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMMUG00000000264	SNRPD3	100	98.425	Macaca_mulatta
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMNEG00000020857	SNRPD3	100	98.425	Macaca_nemestrina
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMLEG00000037548	SNRPD3	100	98.425	Mandrillus_leucophaeus
ENSXMAG00000001133	snrpd3l	100	99.213	ENSMZEG00005017664	snrpd3l	100	99.213	Maylandia_zebra
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMAUG00000021393	Snrpd3	100	98.425	Mesocricetus_auratus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMICG00000034782	SNRPD3	100	98.425	Microcebus_murinus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMOCG00000009361	Snrpd3	100	98.425	Microtus_ochrogaster
ENSXMAG00000001133	snrpd3l	83	100.000	ENSMMOG00000020985	snrpd3l	67	100.000	Mola_mola
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMODG00000004024	SNRPD3	100	98.425	Monodelphis_domestica
ENSXMAG00000001133	snrpd3l	100	99.213	ENSMALG00000013334	snrpd3l	100	99.213	Monopterus_albus
ENSXMAG00000001133	snrpd3l	100	98.425	MGP_CAROLIEiJ_G0015441	Snrpd3	100	98.425	Mus_caroli
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMUSG00000020180	Snrpd3	100	98.425	Mus_musculus
ENSXMAG00000001133	snrpd3l	100	98.425	MGP_PahariEiJ_G0030857	Snrpd3	100	98.425	Mus_pahari
ENSXMAG00000001133	snrpd3l	100	98.425	MGP_SPRETEiJ_G0016254	Snrpd3	100	98.425	Mus_spretus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMPUG00000002889	SNRPD3	100	98.425	Mustela_putorius_furo
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMLUG00000009838	SNRPD3	100	98.425	Myotis_lucifugus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSNGAG00000010328	Snrpd3	100	98.425	Nannospalax_galili
ENSXMAG00000001133	snrpd3l	100	99.213	ENSNBRG00000020307	snrpd3l	100	99.213	Neolamprologus_brichardi
ENSXMAG00000001133	snrpd3l	100	98.425	ENSNLEG00000035757	SNRPD3	100	98.425	Nomascus_leucogenys
ENSXMAG00000001133	snrpd3l	100	98.425	ENSMEUG00000003772	SNRPD3	100	98.425	Notamacropus_eugenii
ENSXMAG00000001133	snrpd3l	100	98.425	ENSOPRG00000005763	SNRPD3	100	98.425	Ochotona_princeps
ENSXMAG00000001133	snrpd3l	100	95.276	ENSODEG00000020162	-	100	95.276	Octodon_degus
ENSXMAG00000001133	snrpd3l	100	97.638	ENSODEG00000019354	-	100	97.638	Octodon_degus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSODEG00000008064	-	100	98.425	Octodon_degus
ENSXMAG00000001133	snrpd3l	100	99.213	ENSONIG00000003828	snrpd3l	100	99.213	Oreochromis_niloticus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSOANG00000002463	SNRPD3	100	98.425	Ornithorhynchus_anatinus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSOCUG00000004845	SNRPD3	100	98.425	Oryctolagus_cuniculus
ENSXMAG00000001133	snrpd3l	100	99.213	ENSORLG00000010586	snrpd3l	100	99.213	Oryzias_latipes
ENSXMAG00000001133	snrpd3l	100	99.213	ENSORLG00020011769	snrpd3l	100	99.213	Oryzias_latipes_hni
ENSXMAG00000001133	snrpd3l	100	99.213	ENSORLG00015022940	snrpd3l	100	99.213	Oryzias_latipes_hsok
ENSXMAG00000001133	snrpd3l	100	100.000	ENSOMEG00000022734	snrpd3l	100	100.000	Oryzias_melastigma
ENSXMAG00000001133	snrpd3l	100	98.425	ENSOGAG00000012708	SNRPD3	100	98.425	Otolemur_garnettii
ENSXMAG00000001133	snrpd3l	100	98.425	ENSOARG00000013984	SNRPD3	100	98.425	Ovis_aries
ENSXMAG00000001133	snrpd3l	100	98.425	ENSPPAG00000039191	SNRPD3	100	98.425	Pan_paniscus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSPPRG00000001470	SNRPD3	100	98.425	Panthera_pardus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSPTIG00000016610	SNRPD3	100	98.425	Panthera_tigris_altaica
ENSXMAG00000001133	snrpd3l	100	98.425	ENSPTRG00000014176	SNRPD3	100	98.425	Pan_troglodytes
ENSXMAG00000001133	snrpd3l	100	98.425	ENSPANG00000009279	SNRPD3	100	98.425	Papio_anubis
ENSXMAG00000001133	snrpd3l	100	98.425	ENSPKIG00000006412	snrpd3l	100	98.425	Paramormyrops_kingsleyae
ENSXMAG00000001133	snrpd3l	100	96.850	ENSPSIG00000010022	-	100	96.850	Pelodiscus_sinensis
ENSXMAG00000001133	snrpd3l	98	97.581	ENSPMGG00000004486	snrpd3l	100	97.581	Periophthalmus_magnuspinnatus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSPCIG00000010910	SNRPD3	84	98.425	Phascolarctos_cinereus
ENSXMAG00000001133	snrpd3l	100	100.000	ENSPFOG00000019673	snrpd3l	100	100.000	Poecilia_formosa
ENSXMAG00000001133	snrpd3l	100	100.000	ENSPLAG00000023249	snrpd3l	100	100.000	Poecilia_latipinna
ENSXMAG00000001133	snrpd3l	100	100.000	ENSPMEG00000008482	snrpd3l	100	100.000	Poecilia_mexicana
ENSXMAG00000001133	snrpd3l	97	89.431	ENSPREG00000007532	snrpd3l	98	89.431	Poecilia_reticulata
ENSXMAG00000001133	snrpd3l	100	98.425	ENSPPYG00000011648	SNRPD3	100	98.425	Pongo_abelii
ENSXMAG00000001133	snrpd3l	100	98.425	ENSPCAG00000002065	SNRPD3	100	98.425	Procavia_capensis
ENSXMAG00000001133	snrpd3l	100	98.425	ENSPCOG00000011842	SNRPD3	100	98.425	Propithecus_coquereli
ENSXMAG00000001133	snrpd3l	100	97.638	ENSPVAG00000011405	SNRPD3	100	97.638	Pteropus_vampyrus
ENSXMAG00000001133	snrpd3l	100	99.213	ENSPNYG00000013344	snrpd3l	100	99.213	Pundamilia_nyererei
ENSXMAG00000001133	snrpd3l	100	96.063	ENSPNAG00000010547	snrpd3	100	96.063	Pygocentrus_nattereri
ENSXMAG00000001133	snrpd3l	100	96.094	ENSPNAG00000008683	snrpd3l	100	96.094	Pygocentrus_nattereri
ENSXMAG00000001133	snrpd3l	100	98.425	ENSRNOG00000050410	Snrpd3	100	98.425	Rattus_norvegicus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSRBIG00000029017	SNRPD3	100	98.425	Rhinopithecus_bieti
ENSXMAG00000001133	snrpd3l	100	98.425	ENSRROG00000031152	SNRPD3	100	98.425	Rhinopithecus_roxellana
ENSXMAG00000001133	snrpd3l	75	47.368	YLR147C	SMD3	92	47.368	Saccharomyces_cerevisiae
ENSXMAG00000001133	snrpd3l	100	96.850	ENSSFOG00015014180	snrpd3l	100	96.850	Scleropages_formosus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSSFOG00015007002	snrpd3l	100	98.425	Scleropages_formosus
ENSXMAG00000001133	snrpd3l	100	99.213	ENSSMAG00000019307	snrpd3l	100	99.213	Scophthalmus_maximus
ENSXMAG00000001133	snrpd3l	100	99.213	ENSSDUG00000006870	snrpd3l	100	99.213	Seriola_dumerili
ENSXMAG00000001133	snrpd3l	100	99.213	ENSSLDG00000022664	snrpd3l	100	99.213	Seriola_lalandi_dorsalis
ENSXMAG00000001133	snrpd3l	100	98.425	ENSSARG00000002357	SNRPD3	100	98.425	Sorex_araneus
ENSXMAG00000001133	snrpd3l	100	97.638	ENSSPUG00000014285	SNRPD3	100	97.638	Sphenodon_punctatus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSSSCG00000010058	SNRPD3	100	98.425	Sus_scrofa
ENSXMAG00000001133	snrpd3l	100	98.425	ENSTGUG00000010079	SNRPD3	100	98.425	Taeniopygia_guttata
ENSXMAG00000001133	snrpd3l	83	100.000	ENSTRUG00000023976	snrpd3l	90	100.000	Takifugu_rubripes
ENSXMAG00000001133	snrpd3l	100	100.000	ENSTNIG00000005323	snrpd3l	100	100.000	Tetraodon_nigroviridis
ENSXMAG00000001133	snrpd3l	100	98.425	ENSTBEG00000014334	SNRPD3	100	98.425	Tupaia_belangeri
ENSXMAG00000001133	snrpd3l	100	98.425	ENSTTRG00000006022	SNRPD3	100	98.425	Tursiops_truncatus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSUAMG00000010767	SNRPD3	100	98.425	Ursus_americanus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSUMAG00000001670	SNRPD3	100	98.425	Ursus_maritimus
ENSXMAG00000001133	snrpd3l	100	98.425	ENSVPAG00000000241	SNRPD3	100	98.425	Vicugna_pacos
ENSXMAG00000001133	snrpd3l	83	100.000	ENSVVUG00000019340	SNRPD3	53	100.000	Vulpes_vulpes
ENSXMAG00000001133	snrpd3l	100	82.171	ENSXETG00000024918	snrpd3	100	78.295	Xenopus_tropicalis
ENSXMAG00000001133	snrpd3l	100	100.000	ENSXCOG00000004795	snrpd3l	100	100.000	Xiphophorus_couchianus