EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001310 (Gene tree)
Gene ID: 102231447
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 22150 bases
Position: chr16:13608229-13630378
Accession: 102231447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000001340	Ribonuc_2-5A	PF06479.12	3.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000001343	-	5684	XM_005808890	ENSXMAP00000001340	1060 (aa)	XP_005808947	M3ZGJ8

Gene Model

Click here to download ENSXMAG00000001310's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04140	Autophagy - animal	KEGG
xma04141	Protein processing in endoplasmic reticulum	KEGG
xma04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001310	ern1	96	88.694	ENSAPOG00000009999	ern1	93	89.960	Acanthochromis_polyacanthus
ENSXMAG00000001310	ern1	99	86.023	ENSACIG00000021716	ern1	98	86.023	Amphilophus_citrinellus
ENSXMAG00000001310	ern1	94	90.377	ENSAOCG00000012309	ern1	93	90.377	Amphiprion_ocellaris
ENSXMAG00000001310	ern1	96	88.813	ENSAPEG00000011263	ern1	98	92.541	Amphiprion_percula
ENSXMAG00000001310	ern1	99	84.860	ENSATEG00000024468	ern1	98	84.860	Anabas_testudineus
ENSXMAG00000001310	ern1	96	88.547	ENSACLG00000027919	ern1	99	85.727	Astatotilapia_calliptera
ENSXMAG00000001310	ern1	99	78.693	ENSAMXG00000000944	ern1	99	78.693	Astyanax_mexicanus
ENSXMAG00000001310	ern1	90	88.199	ENSCSEG00000014500	ern1	98	86.310	Cynoglossus_semilaevis
ENSXMAG00000001310	ern1	100	91.557	ENSCVAG00000002988	ern1	100	91.557	Cyprinodon_variegatus
ENSXMAG00000001310	ern1	91	80.777	ENSDARG00000013997	ern1	100	81.366	Danio_rerio
ENSXMAG00000001310	ern1	95	78.177	ENSELUG00000005957	ern1	98	78.177	Esox_lucius
ENSXMAG00000001310	ern1	99	89.840	ENSFHEG00000005578	ern1	99	89.840	Fundulus_heteroclitus
ENSXMAG00000001310	ern1	88	86.752	ENSGMOG00000011232	ern1	100	86.752	Gadus_morhua
ENSXMAG00000001310	ern1	100	97.736	ENSGAFG00000020231	ern1	100	97.736	Gambusia_affinis
ENSXMAG00000001310	ern1	88	90.171	ENSGACG00000011700	ern1	97	90.171	Gasterosteus_aculeatus
ENSXMAG00000001310	ern1	94	89.042	ENSHBUG00000012581	ern1	95	88.481	Haplochromis_burtoni
ENSXMAG00000001310	ern1	90	87.331	ENSHCOG00000016199	ern1	90	88.424	Hippocampus_comes
ENSXMAG00000001310	ern1	99	78.240	ENSIPUG00000011083	ern1	98	78.240	Ictalurus_punctatus
ENSXMAG00000001310	ern1	94	89.357	ENSKMAG00000019499	ern1	98	85.809	Kryptolebias_marmoratus
ENSXMAG00000001310	ern1	98	81.023	ENSLBEG00000025907	ern1	99	81.023	Labrus_bergylta
ENSXMAG00000001310	ern1	99	85.327	ENSMAMG00000023439	ern1	98	86.220	Mastacembelus_armatus
ENSXMAG00000001310	ern1	96	88.547	ENSMZEG00005003221	ern1	99	85.727	Maylandia_zebra
ENSXMAG00000001310	ern1	91	88.706	ENSMMOG00000007650	ern1	97	88.706	Mola_mola
ENSXMAG00000001310	ern1	91	90.574	ENSMALG00000017775	ern1	89	90.574	Monopterus_albus
ENSXMAG00000001310	ern1	94	89.751	ENSNBRG00000002179	ern1	94	89.751	Neolamprologus_brichardi
ENSXMAG00000001310	ern1	90	90.167	ENSONIG00000017169	ern1	99	90.167	Oreochromis_niloticus
ENSXMAG00000001310	ern1	99	83.457	ENSORLG00000008940	ern1	100	84.308	Oryzias_latipes
ENSXMAG00000001310	ern1	99	83.257	ENSORLG00020018387	ern1	100	84.104	Oryzias_latipes_hni
ENSXMAG00000001310	ern1	99	82.873	ENSORLG00015007946	ern1	100	83.719	Oryzias_latipes_hsok
ENSXMAG00000001310	ern1	99	84.787	ENSOMEG00000011741	ern1	100	84.787	Oryzias_melastigma
ENSXMAG00000001310	ern1	90	83.177	ENSPKIG00000005593	ern1	97	83.177	Paramormyrops_kingsleyae
ENSXMAG00000001310	ern1	94	86.265	ENSPMGG00000020442	ern1	97	86.286	Periophthalmus_magnuspinnatus
ENSXMAG00000001310	ern1	100	97.736	ENSPFOG00000007378	ern1	100	97.736	Poecilia_formosa
ENSXMAG00000001310	ern1	100	97.736	ENSPLAG00000014780	ern1	100	97.736	Poecilia_latipinna
ENSXMAG00000001310	ern1	100	98.019	ENSPMEG00000016324	ern1	100	98.019	Poecilia_mexicana
ENSXMAG00000001310	ern1	100	97.075	ENSPREG00000006286	ern1	100	97.075	Poecilia_reticulata
ENSXMAG00000001310	ern1	96	88.547	ENSPNYG00000017929	ern1	98	90.278	Pundamilia_nyererei
ENSXMAG00000001310	ern1	96	81.543	ENSPNAG00000029447	ern1	98	81.641	Pygocentrus_nattereri
ENSXMAG00000001310	ern1	97	85.496	ENSSMAG00000015042	ern1	96	85.496	Scophthalmus_maximus
ENSXMAG00000001310	ern1	99	86.884	ENSSDUG00000009098	ern1	98	86.884	Seriola_dumerili
ENSXMAG00000001310	ern1	99	86.791	ENSSLDG00000023254	ern1	98	86.791	Seriola_lalandi_dorsalis
ENSXMAG00000001310	ern1	96	88.846	ENSSPAG00000017539	ern1	95	88.846	Stegastes_partitus
ENSXMAG00000001310	ern1	91	87.461	ENSTRUG00000001041	ern1	94	87.461	Takifugu_rubripes
ENSXMAG00000001310	ern1	89	89.357	ENSTNIG00000017990	ern1	99	89.474	Tetraodon_nigroviridis
ENSXMAG00000001310	ern1	97	96.321	ENSXCOG00000010330	ern1	97	99.489	Xiphophorus_couchianus