EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001331 (Gene tree)
Gene ID: 102227316
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 9671 bases
Position: chr23:31680644-31690314
Accession: 102227316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000001324	SLBP_RNA_bind	PF15247.6	8.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000001327	-	1687	XM_005816061	ENSXMAP00000001324	273 (aa)	XP_005816118	M3ZGI2

Gene Model

Click here to download ENSXMAG00000001331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001331	-	88	52.049	ENSG00000163950	SLBP	81	54.206	Homo_sapiens
ENSXMAG00000001331	-	99	73.145	ENSAPOG00000004953	slbp	100	73.145	Acanthochromis_polyacanthus
ENSXMAG00000001331	-	54	66.225	ENSAMEG00000016915	SLBP	88	54.930	Ailuropoda_melanoleuca
ENSXMAG00000001331	-	92	73.256	ENSACIG00000022308	slbp	97	73.256	Amphilophus_citrinellus
ENSXMAG00000001331	-	99	71.731	ENSAOCG00000024545	slbp	100	71.731	Amphiprion_ocellaris
ENSXMAG00000001331	-	99	71.731	ENSAPEG00000017629	slbp	100	71.731	Amphiprion_percula
ENSXMAG00000001331	-	97	74.638	ENSATEG00000016358	slbp	97	74.638	Anabas_testudineus
ENSXMAG00000001331	-	75	50.000	ENSAPLG00000015989	-	88	52.857	Anas_platyrhynchos
ENSXMAG00000001331	-	87	50.000	ENSANAG00000034769	SLBP	81	54.206	Aotus_nancymaae
ENSXMAG00000001331	-	94	71.375	ENSACLG00000007036	-	96	71.375	Astatotilapia_calliptera
ENSXMAG00000001331	-	98	55.357	ENSAMXG00000014527	slbp	98	55.357	Astyanax_mexicanus
ENSXMAG00000001331	-	79	53.333	ENSBTAG00000001328	SLBP	90	48.905	Bos_taurus
ENSXMAG00000001331	-	87	51.029	ENSCJAG00000001790	SLBP	82	49.407	Callithrix_jacchus
ENSXMAG00000001331	-	71	56.500	ENSCAFG00000015016	SLBP	82	51.613	Canis_familiaris
ENSXMAG00000001331	-	71	56.500	ENSCAFG00020012334	SLBP	82	51.613	Canis_lupus_dingo
ENSXMAG00000001331	-	79	54.054	ENSCHIG00000019364	SLBP	90	49.446	Capra_hircus
ENSXMAG00000001331	-	88	52.459	ENSTSYG00000000376	SLBP	81	53.271	Carlito_syrichta
ENSXMAG00000001331	-	58	61.963	ENSCPOG00000000031	SLBP	81	50.813	Cavia_porcellus
ENSXMAG00000001331	-	88	52.049	ENSCATG00000029173	SLBP	81	54.206	Cercocebus_atys
ENSXMAG00000001331	-	58	63.354	ENSCLAG00000008157	SLBP	83	51.417	Chinchilla_lanigera
ENSXMAG00000001331	-	64	48.315	ENSCSAG00000015628	SLBP	61	48.066	Chlorocebus_sabaeus
ENSXMAG00000001331	-	88	52.632	ENSCPBG00000000746	SLBP	82	52.632	Chrysemys_picta_bellii
ENSXMAG00000001331	-	75	54.808	ENSCANG00000041008	SLBP	87	54.028	Colobus_angolensis_palliatus
ENSXMAG00000001331	-	78	53.211	ENSCGRG00001012991	-	86	49.804	Cricetulus_griseus_chok1gshd
ENSXMAG00000001331	-	79	54.505	ENSCGRG00001009760	-	85	50.965	Cricetulus_griseus_chok1gshd
ENSXMAG00000001331	-	79	54.505	ENSCGRG00000004506	Slbp	85	50.965	Cricetulus_griseus_crigri
ENSXMAG00000001331	-	97	69.517	ENSCSEG00000020337	-	98	69.517	Cynoglossus_semilaevis
ENSXMAG00000001331	-	99	78.832	ENSCVAG00000019592	-	100	79.197	Cyprinodon_variegatus
ENSXMAG00000001331	-	95	56.134	ENSDARG00000100558	slbp	87	56.877	Danio_rerio
ENSXMAG00000001331	-	71	56.039	ENSDNOG00000047539	SLBP	84	50.391	Dasypus_novemcinctus
ENSXMAG00000001331	-	62	55.814	ENSDORG00000003028	Slbp	90	64.052	Dipodomys_ordii
ENSXMAG00000001331	-	76	51.402	ENSETEG00000004641	SLBP	87	54.502	Echinops_telfairi
ENSXMAG00000001331	-	50	59.574	ENSEASG00005022714	SLBP	86	52.432	Equus_asinus_asinus
ENSXMAG00000001331	-	66	61.290	ENSECAG00000011689	SLBP	59	60.847	Equus_caballus
ENSXMAG00000001331	-	97	57.040	ENSELUG00000012854	slbp	97	57.040	Esox_lucius
ENSXMAG00000001331	-	71	54.040	ENSFCAG00000000169	SLBP	88	51.037	Felis_catus
ENSXMAG00000001331	-	88	50.403	ENSFALG00000010003	-	84	50.403	Ficedula_albicollis
ENSXMAG00000001331	-	67	60.000	ENSFDAG00000007592	SLBP	89	52.000	Fukomys_damarensis
ENSXMAG00000001331	-	99	81.919	ENSFHEG00000007497	slbp	100	80.443	Fundulus_heteroclitus
ENSXMAG00000001331	-	56	73.248	ENSGMOG00000015352	slbp	100	72.500	Gadus_morhua
ENSXMAG00000001331	-	96	49.815	ENSGALG00000015712	SLBP	90	49.815	Gallus_gallus
ENSXMAG00000001331	-	99	97.407	ENSGAFG00000019577	slbp	100	97.407	Gambusia_affinis
ENSXMAG00000001331	-	91	65.882	ENSGACG00000019596	slbp	93	65.882	Gasterosteus_aculeatus
ENSXMAG00000001331	-	73	58.173	ENSGAGG00000012096	SLBP	83	58.173	Gopherus_agassizii
ENSXMAG00000001331	-	88	52.049	ENSGGOG00000003167	SLBP	81	54.206	Gorilla_gorilla
ENSXMAG00000001331	-	94	71.747	ENSHBUG00000003338	-	96	71.747	Haplochromis_burtoni
ENSXMAG00000001331	-	59	55.357	ENSHGLG00000010461	-	84	46.667	Heterocephalus_glaber_female
ENSXMAG00000001331	-	64	51.705	ENSHGLG00000008313	-	84	44.355	Heterocephalus_glaber_female
ENSXMAG00000001331	-	64	52.273	ENSHGLG00100010510	-	84	45.161	Heterocephalus_glaber_male
ENSXMAG00000001331	-	59	55.357	ENSHGLG00100014906	-	84	46.667	Heterocephalus_glaber_male
ENSXMAG00000001331	-	66	61.497	ENSHGLG00100014018	-	90	62.234	Heterocephalus_glaber_male
ENSXMAG00000001331	-	97	69.549	ENSHCOG00000013425	slbp	97	69.549	Hippocampus_comes
ENSXMAG00000001331	-	90	54.941	ENSIPUG00000016780	slbp	94	54.941	Ictalurus_punctatus
ENSXMAG00000001331	-	72	57.711	ENSSTOG00000003262	SLBP	83	52.000	Ictidomys_tridecemlineatus
ENSXMAG00000001331	-	84	47.826	ENSJJAG00000020549	-	82	52.439	Jaculus_jaculus
ENSXMAG00000001331	-	75	56.459	ENSJJAG00000002394	-	82	51.429	Jaculus_jaculus
ENSXMAG00000001331	-	99	74.552	ENSKMAG00000008187	slbp	99	74.552	Kryptolebias_marmoratus
ENSXMAG00000001331	-	97	70.370	ENSLBEG00000024709	slbp	97	70.370	Labrus_bergylta
ENSXMAG00000001331	-	91	48.855	ENSLACG00000014623	SLBP	87	50.394	Latimeria_chalumnae
ENSXMAG00000001331	-	94	58.029	ENSLOCG00000011027	slbp	90	58.029	Lepisosteus_oculatus
ENSXMAG00000001331	-	74	57.488	ENSLAFG00000012933	SLBP	81	56.667	Loxodonta_africana
ENSXMAG00000001331	-	87	51.852	ENSMFAG00000030130	SLBP	74	50.259	Macaca_fascicularis
ENSXMAG00000001331	-	88	50.598	ENSMMUG00000032303	SLBP	84	54.717	Macaca_mulatta
ENSXMAG00000001331	-	51	51.007	ENSMNEG00000008082	SLBP	64	50.658	Macaca_nemestrina
ENSXMAG00000001331	-	85	50.847	ENSMLEG00000024639	SLBP	76	54.717	Mandrillus_leucophaeus
ENSXMAG00000001331	-	97	67.391	ENSMAMG00000001046	-	97	67.391	Mastacembelus_armatus
ENSXMAG00000001331	-	94	71.747	ENSMZEG00005017261	-	96	71.747	Maylandia_zebra
ENSXMAG00000001331	-	75	53.140	ENSMGAG00000013085	SLBP	87	52.657	Meleagris_gallopavo
ENSXMAG00000001331	-	79	54.751	ENSMAUG00000009490	Slbp	85	51.163	Mesocricetus_auratus
ENSXMAG00000001331	-	64	60.556	ENSMICG00000014244	SLBP	81	52.033	Microcebus_murinus
ENSXMAG00000001331	-	75	55.450	ENSMOCG00000015826	Slbp	85	59.788	Microtus_ochrogaster
ENSXMAG00000001331	-	90	64.516	ENSMMOG00000010181	slbp	93	64.516	Mola_mola
ENSXMAG00000001331	-	71	57.767	ENSMODG00000004304	SLBP	88	52.549	Monodelphis_domestica
ENSXMAG00000001331	-	99	71.127	ENSMALG00000013883	-	74	71.127	Monopterus_albus
ENSXMAG00000001331	-	75	55.924	MGP_CAROLIEiJ_G0027117	Slbp	82	60.317	Mus_caroli
ENSXMAG00000001331	-	75	55.924	ENSMUSG00000004642	Slbp	83	60.317	Mus_musculus
ENSXMAG00000001331	-	75	55.924	MGP_PahariEiJ_G0016901	Slbp	82	60.317	Mus_pahari
ENSXMAG00000001331	-	75	55.924	MGP_SPRETEiJ_G0028113	Slbp	83	60.317	Mus_spretus
ENSXMAG00000001331	-	61	55.233	ENSMPUG00000011139	SLBP	79	54.857	Mustela_putorius_furo
ENSXMAG00000001331	-	55	61.184	ENSMLUG00000004425	SLBP	70	52.695	Myotis_lucifugus
ENSXMAG00000001331	-	75	54.976	ENSNGAG00000020799	Slbp	82	51.429	Nannospalax_galili
ENSXMAG00000001331	-	86	72.177	ENSNBRG00000006044	-	94	72.177	Neolamprologus_brichardi
ENSXMAG00000001331	-	88	50.598	ENSNLEG00000000048	SLBP	81	54.206	Nomascus_leucogenys
ENSXMAG00000001331	-	53	67.123	ENSMEUG00000002501	SLBP	91	60.947	Notamacropus_eugenii
ENSXMAG00000001331	-	58	64.596	ENSODEG00000012641	SLBP	85	51.822	Octodon_degus
ENSXMAG00000001331	-	92	71.756	ENSONIG00000017469	-	94	71.756	Oreochromis_niloticus
ENSXMAG00000001331	-	75	55.825	ENSOANG00000014243	SLBP	83	55.825	Ornithorhynchus_anatinus
ENSXMAG00000001331	-	97	65.918	ENSORLG00000024887	-	96	66.415	Oryzias_latipes
ENSXMAG00000001331	-	97	64.906	ENSORLG00020007798	slbp	97	64.906	Oryzias_latipes_hni
ENSXMAG00000001331	-	97	65.038	ENSORLG00015016656	slbp	97	65.038	Oryzias_latipes_hsok
ENSXMAG00000001331	-	97	63.910	ENSOMEG00000010818	slbp	97	64.662	Oryzias_melastigma
ENSXMAG00000001331	-	88	53.279	ENSOGAG00000009750	SLBP	81	53.036	Otolemur_garnettii
ENSXMAG00000001331	-	59	61.585	ENSOARG00000016090	SLBP	88	53.991	Ovis_aries
ENSXMAG00000001331	-	88	52.049	ENSPPAG00000033300	SLBP	81	54.206	Pan_paniscus
ENSXMAG00000001331	-	60	56.548	ENSPPRG00000016897	SLBP	89	51.626	Panthera_pardus
ENSXMAG00000001331	-	87	51.852	ENSPTRG00000015832	SLBP	81	54.206	Pan_troglodytes
ENSXMAG00000001331	-	88	49.801	ENSPANG00000004932	SLBP	81	54.206	Papio_anubis
ENSXMAG00000001331	-	90	59.375	ENSPKIG00000006183	slbp	93	57.664	Paramormyrops_kingsleyae
ENSXMAG00000001331	-	79	65.022	ENSPMGG00000017684	-	99	65.990	Periophthalmus_magnuspinnatus
ENSXMAG00000001331	-	75	55.450	ENSPEMG00000018369	Slbp	82	51.613	Peromyscus_maniculatus_bairdii
ENSXMAG00000001331	-	71	55.607	ENSPCIG00000013575	SLBP	70	50.951	Phascolarctos_cinereus
ENSXMAG00000001331	-	99	97.037	ENSPFOG00000000462	slbp	100	97.037	Poecilia_formosa
ENSXMAG00000001331	-	99	96.296	ENSPLAG00000008300	slbp	100	96.296	Poecilia_latipinna
ENSXMAG00000001331	-	99	97.037	ENSPMEG00000020807	slbp	100	97.037	Poecilia_mexicana
ENSXMAG00000001331	-	99	97.407	ENSPREG00000004561	slbp	100	97.407	Poecilia_reticulata
ENSXMAG00000001331	-	88	52.049	ENSPPYG00000014529	SLBP	81	51.822	Pongo_abelii
ENSXMAG00000001331	-	91	52.362	ENSPCOG00000017399	SLBP	84	52.140	Propithecus_coquereli
ENSXMAG00000001331	-	81	51.339	ENSPVAG00000002807	SLBP	90	48.148	Pteropus_vampyrus
ENSXMAG00000001331	-	94	71.747	ENSPNYG00000005451	-	96	71.747	Pundamilia_nyererei
ENSXMAG00000001331	-	99	54.448	ENSPNAG00000018503	slbp	100	54.448	Pygocentrus_nattereri
ENSXMAG00000001331	-	75	55.924	ENSRNOG00000037162	Slbp	82	52.016	Rattus_norvegicus
ENSXMAG00000001331	-	88	52.049	ENSRBIG00000039159	SLBP	81	54.206	Rhinopithecus_bieti
ENSXMAG00000001331	-	88	52.049	ENSRROG00000030081	SLBP	83	51.822	Rhinopithecus_roxellana
ENSXMAG00000001331	-	65	53.591	ENSSBOG00000033897	SLBP	86	52.717	Saimiri_boliviensis_boliviensis
ENSXMAG00000001331	-	74	53.812	ENSSHAG00000013939	SLBP	84	49.632	Sarcophilus_harrisii
ENSXMAG00000001331	-	97	57.143	ENSSFOG00015019429	slbp	97	57.143	Scleropages_formosus
ENSXMAG00000001331	-	94	69.403	ENSSMAG00000016028	-	97	68.116	Scophthalmus_maximus
ENSXMAG00000001331	-	99	74.275	ENSSDUG00000000855	-	100	74.275	Seriola_dumerili
ENSXMAG00000001331	-	53	78.146	ENSSLDG00000022893	-	87	80.822	Seriola_lalandi_dorsalis
ENSXMAG00000001331	-	92	53.906	ENSSLDG00000007554	-	83	52.734	Seriola_lalandi_dorsalis
ENSXMAG00000001331	-	89	47.561	ENSSPUG00000016007	SLBP	87	51.200	Sphenodon_punctatus
ENSXMAG00000001331	-	98	72.727	ENSSPAG00000004021	slbp	100	73.256	Stegastes_partitus
ENSXMAG00000001331	-	75	56.190	ENSSSCG00000008676	SLBP	84	51.383	Sus_scrofa
ENSXMAG00000001331	-	88	50.607	ENSTGUG00000010626	-	88	51.012	Taeniopygia_guttata
ENSXMAG00000001331	-	97	69.030	ENSTRUG00000000688	slbp	97	69.888	Takifugu_rubripes
ENSXMAG00000001331	-	90	66.935	ENSTNIG00000000484	-	98	66.935	Tetraodon_nigroviridis
ENSXMAG00000001331	-	71	31.472	ENSTBEG00000004085	SLBP	63	45.055	Tupaia_belangeri
ENSXMAG00000001331	-	53	66.000	ENSTTRG00000010901	-	88	54.067	Tursiops_truncatus
ENSXMAG00000001331	-	53	61.333	ENSTTRG00000004010	-	91	56.627	Tursiops_truncatus
ENSXMAG00000001331	-	66	61.290	ENSUAMG00000012990	SLBP	81	52.419	Ursus_americanus
ENSXMAG00000001331	-	71	56.500	ENSVVUG00000015578	-	82	51.210	Vulpes_vulpes
ENSXMAG00000001331	-	97	47.794	ENSXETG00000003876	slbp	93	47.794	Xenopus_tropicalis
ENSXMAG00000001331	-	92	96.032	ENSXCOG00000008275	slbp	98	96.032	Xiphophorus_couchianus