EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001423 (Gene tree)
Gene ID: 102224480
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 15992 bases
Position: chr20:19171284-19187275
Accession: 102224480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000001419	THUMP	PF02926.17	6e-11	1	1
ENSXMAP00000030753	THUMP	PF02926.17	6e-11	1	1
ENSXMAP00000001419	UPF0020	PF01170.18	6e-40	1	1
ENSXMAP00000030753	UPF0020	PF01170.18	6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000001422	-	2525	XM_014469062	ENSXMAP00000001419	500 (aa)	XP_014324548	M3ZGS7
ENSXMAT00000042294	-	2822	-	ENSXMAP00000030753	500 (aa)	-	UPI000293ADDE

Gene Model

Click here to download ENSXMAG00000001423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001423	thumpd3	97	55.952	ENSG00000134077	THUMPD3	97	57.171	Homo_sapiens
ENSXMAG00000001423	thumpd3	98	84.016	ENSAPOG00000015836	thumpd3	99	84.016	Acanthochromis_polyacanthus
ENSXMAG00000001423	thumpd3	95	56.634	ENSAMEG00000011321	THUMPD3	99	56.974	Ailuropoda_melanoleuca
ENSXMAG00000001423	thumpd3	99	82.565	ENSACIG00000020096	thumpd3	99	82.565	Amphilophus_citrinellus
ENSXMAG00000001423	thumpd3	99	83.166	ENSAOCG00000004399	thumpd3	99	83.166	Amphiprion_ocellaris
ENSXMAG00000001423	thumpd3	99	83.367	ENSAPEG00000016740	thumpd3	99	83.367	Amphiprion_percula
ENSXMAG00000001423	thumpd3	99	79.960	ENSATEG00000005345	thumpd3	99	79.960	Anabas_testudineus
ENSXMAG00000001423	thumpd3	76	61.042	ENSAPLG00000003598	THUMPD3	99	62.087	Anas_platyrhynchos
ENSXMAG00000001423	thumpd3	94	59.136	ENSACAG00000014974	THUMPD3	98	59.136	Anolis_carolinensis
ENSXMAG00000001423	thumpd3	93	56.432	ENSANAG00000002365	THUMPD3	94	57.829	Aotus_nancymaae
ENSXMAG00000001423	thumpd3	99	81.363	ENSACLG00000023333	thumpd3	99	81.363	Astatotilapia_calliptera
ENSXMAG00000001423	thumpd3	83	56.280	ENSACLG00000013504	-	87	56.280	Astatotilapia_calliptera
ENSXMAG00000001423	thumpd3	93	70.000	ENSAMXG00000015683	thumpd3	98	70.000	Astyanax_mexicanus
ENSXMAG00000001423	thumpd3	95	58.600	ENSBTAG00000003112	THUMPD3	98	59.155	Bos_taurus
ENSXMAG00000001423	thumpd3	85	36.534	WBGene00010846	M04B2.2	96	36.768	Caenorhabditis_elegans
ENSXMAG00000001423	thumpd3	93	56.818	ENSCJAG00000015949	THUMPD3	93	58.058	Callithrix_jacchus
ENSXMAG00000001423	thumpd3	73	60.313	ENSCAFG00000008060	-	93	60.313	Canis_familiaris
ENSXMAG00000001423	thumpd3	88	61.842	ENSCAFG00000005499	THUMPD3	90	61.842	Canis_familiaris
ENSXMAG00000001423	thumpd3	78	61.275	ENSCAFG00020025887	-	94	61.275	Canis_lupus_dingo
ENSXMAG00000001423	thumpd3	88	61.842	ENSCAFG00020008895	-	90	61.842	Canis_lupus_dingo
ENSXMAG00000001423	thumpd3	97	58.333	ENSCHIG00000024037	THUMPD3	98	58.333	Capra_hircus
ENSXMAG00000001423	thumpd3	93	56.263	ENSTSYG00000000159	THUMPD3	94	57.202	Carlito_syrichta
ENSXMAG00000001423	thumpd3	85	40.930	ENSCAPG00000017486	THUMPD3	84	41.190	Cavia_aperea
ENSXMAG00000001423	thumpd3	90	59.101	ENSCPOG00000033287	THUMPD3	92	59.101	Cavia_porcellus
ENSXMAG00000001423	thumpd3	93	56.818	ENSCCAG00000027067	-	94	58.212	Cebus_capucinus
ENSXMAG00000001423	thumpd3	93	51.134	ENSCCAG00000021429	-	94	52.941	Cebus_capucinus
ENSXMAG00000001423	thumpd3	97	56.262	ENSCATG00000040999	THUMPD3	98	57.171	Cercocebus_atys
ENSXMAG00000001423	thumpd3	89	59.914	ENSCLAG00000000690	THUMPD3	91	59.914	Chinchilla_lanigera
ENSXMAG00000001423	thumpd3	94	56.531	ENSCSAG00000010753	THUMPD3	96	57.464	Chlorocebus_sabaeus
ENSXMAG00000001423	thumpd3	83	47.581	ENSCHOG00000012851	THUMPD3	83	47.581	Choloepus_hoffmanni
ENSXMAG00000001423	thumpd3	93	59.229	ENSCPBG00000014771	THUMPD3	96	59.838	Chrysemys_picta_bellii
ENSXMAG00000001423	thumpd3	88	40.909	ENSCSAVG00000008668	-	97	40.909	Ciona_savignyi
ENSXMAG00000001423	thumpd3	97	55.467	ENSCANG00000031901	THUMPD3	98	56.375	Colobus_angolensis_palliatus
ENSXMAG00000001423	thumpd3	89	59.565	ENSCGRG00001024117	Thumpd3	91	59.565	Cricetulus_griseus_chok1gshd
ENSXMAG00000001423	thumpd3	89	59.565	ENSCGRG00000018116	Thumpd3	91	59.565	Cricetulus_griseus_crigri
ENSXMAG00000001423	thumpd3	93	77.419	ENSCSEG00000002546	thumpd3	96	77.419	Cynoglossus_semilaevis
ENSXMAG00000001423	thumpd3	99	85.944	ENSCVAG00000001019	thumpd3	98	85.944	Cyprinodon_variegatus
ENSXMAG00000001423	thumpd3	93	66.667	ENSDARG00000059634	thumpd3	98	66.667	Danio_rerio
ENSXMAG00000001423	thumpd3	92	57.411	ENSDNOG00000047668	THUMPD3	91	58.700	Dasypus_novemcinctus
ENSXMAG00000001423	thumpd3	90	58.635	ENSDORG00000003257	Thumpd3	93	59.871	Dipodomys_ordii
ENSXMAG00000001423	thumpd3	58	53.226	ENSETEG00000020239	-	60	55.161	Echinops_telfairi
ENSXMAG00000001423	thumpd3	86	52.370	ENSEBUG00000004221	thumpd3	97	52.370	Eptatretus_burgeri
ENSXMAG00000001423	thumpd3	90	58.174	ENSEASG00005013327	THUMPD3	92	59.275	Equus_asinus_asinus
ENSXMAG00000001423	thumpd3	90	60.297	ENSECAG00000002016	THUMPD3	92	61.407	Equus_caballus
ENSXMAG00000001423	thumpd3	95	53.644	ENSEEUG00000014696	THUMPD3	98	53.644	Erinaceus_europaeus
ENSXMAG00000001423	thumpd3	88	84.669	ENSELUG00000018246	thumpd3	91	79.114	Esox_lucius
ENSXMAG00000001423	thumpd3	90	60.730	ENSFCAG00000006171	THUMPD3	92	60.730	Felis_catus
ENSXMAG00000001423	thumpd3	83	59.132	ENSFALG00000013631	THUMPD3	91	59.361	Ficedula_albicollis
ENSXMAG00000001423	thumpd3	91	58.263	ENSFDAG00000014825	THUMPD3	92	59.574	Fukomys_damarensis
ENSXMAG00000001423	thumpd3	99	87.600	ENSFHEG00000006006	thumpd3	99	88.000	Fundulus_heteroclitus
ENSXMAG00000001423	thumpd3	94	69.851	ENSGMOG00000007923	thumpd3	95	69.851	Gadus_morhua
ENSXMAG00000001423	thumpd3	87	58.925	ENSGALG00000044813	THUMPD3	94	59.785	Gallus_gallus
ENSXMAG00000001423	thumpd3	100	96.800	ENSGAFG00000021645	thumpd3	100	96.800	Gambusia_affinis
ENSXMAG00000001423	thumpd3	94	79.915	ENSGACG00000000930	thumpd3	99	79.915	Gasterosteus_aculeatus
ENSXMAG00000001423	thumpd3	93	59.026	ENSGAGG00000022750	THUMPD3	96	59.838	Gopherus_agassizii
ENSXMAG00000001423	thumpd3	97	55.777	ENSGGOG00000000604	THUMPD3	97	57.000	Gorilla_gorilla
ENSXMAG00000001423	thumpd3	99	81.363	ENSHBUG00000013405	thumpd3	99	81.363	Haplochromis_burtoni
ENSXMAG00000001423	thumpd3	89	58.009	ENSHGLG00000016200	THUMPD3	91	59.259	Heterocephalus_glaber_female
ENSXMAG00000001423	thumpd3	89	58.225	ENSHGLG00100017321	-	91	59.091	Heterocephalus_glaber_male
ENSXMAG00000001423	thumpd3	87	52.573	ENSHGLG00100000505	-	92	52.573	Heterocephalus_glaber_male
ENSXMAG00000001423	thumpd3	93	76.989	ENSHCOG00000004871	thumpd3	97	77.253	Hippocampus_comes
ENSXMAG00000001423	thumpd3	90	71.397	ENSIPUG00000019415	THUMPD3	92	71.397	Ictalurus_punctatus
ENSXMAG00000001423	thumpd3	88	60.706	ENSSTOG00000003973	THUMPD3	90	60.706	Ictidomys_tridecemlineatus
ENSXMAG00000001423	thumpd3	92	52.321	ENSJJAG00000017751	Thumpd3	92	53.474	Jaculus_jaculus
ENSXMAG00000001423	thumpd3	99	80.120	ENSKMAG00000021025	thumpd3	94	80.120	Kryptolebias_marmoratus
ENSXMAG00000001423	thumpd3	99	80.762	ENSLBEG00000012252	thumpd3	99	80.762	Labrus_bergylta
ENSXMAG00000001423	thumpd3	95	58.266	ENSLACG00000018604	THUMPD3	98	57.685	Latimeria_chalumnae
ENSXMAG00000001423	thumpd3	92	61.980	ENSLOCG00000009800	thumpd3	94	65.227	Lepisosteus_oculatus
ENSXMAG00000001423	thumpd3	89	60.870	ENSLAFG00000005103	THUMPD3	92	60.560	Loxodonta_africana
ENSXMAG00000001423	thumpd3	94	56.762	ENSMFAG00000044884	THUMPD3	96	57.700	Macaca_fascicularis
ENSXMAG00000001423	thumpd3	94	56.762	ENSMMUG00000017307	THUMPD3	96	57.700	Macaca_mulatta
ENSXMAG00000001423	thumpd3	94	56.762	ENSMNEG00000030529	THUMPD3	96	57.700	Macaca_nemestrina
ENSXMAG00000001423	thumpd3	97	57.312	ENSMLEG00000032943	THUMPD3	98	57.312	Mandrillus_leucophaeus
ENSXMAG00000001423	thumpd3	94	81.277	ENSMAMG00000023934	thumpd3	99	78.357	Mastacembelus_armatus
ENSXMAG00000001423	thumpd3	99	81.363	ENSMZEG00005010623	thumpd3	99	81.363	Maylandia_zebra
ENSXMAG00000001423	thumpd3	77	61.404	ENSMGAG00000010182	THUMPD3	100	61.404	Meleagris_gallopavo
ENSXMAG00000001423	thumpd3	91	60.213	ENSMAUG00000012250	Thumpd3	92	60.213	Mesocricetus_auratus
ENSXMAG00000001423	thumpd3	93	54.819	ENSMICG00000010095	THUMPD3	95	55.422	Microcebus_murinus
ENSXMAG00000001423	thumpd3	88	59.956	ENSMOCG00000020148	Thumpd3	90	61.099	Microtus_ochrogaster
ENSXMAG00000001423	thumpd3	99	76.908	ENSMMOG00000021791	thumpd3	99	79.449	Mola_mola
ENSXMAG00000001423	thumpd3	96	55.138	ENSMODG00000004715	-	99	55.336	Monodelphis_domestica
ENSXMAG00000001423	thumpd3	95	81.395	ENSMALG00000017316	thumpd3	99	81.395	Monopterus_albus
ENSXMAG00000001423	thumpd3	53	56.429	MGP_CAROLIEiJ_G0028714	-	58	56.429	Mus_caroli
ENSXMAG00000001423	thumpd3	90	59.957	ENSMUSG00000030264	Thumpd3	92	59.957	Mus_musculus
ENSXMAG00000001423	thumpd3	90	59.743	MGP_PahariEiJ_G0022465	Thumpd3	92	59.743	Mus_pahari
ENSXMAG00000001423	thumpd3	90	59.957	MGP_SPRETEiJ_G0029742	Thumpd3	92	59.957	Mus_spretus
ENSXMAG00000001423	thumpd3	93	58.246	ENSMPUG00000017066	-	94	58.787	Mustela_putorius_furo
ENSXMAG00000001423	thumpd3	93	52.941	ENSMPUG00000005219	-	94	54.105	Mustela_putorius_furo
ENSXMAG00000001423	thumpd3	92	58.836	ENSMLUG00000008538	THUMPD3	94	58.836	Myotis_lucifugus
ENSXMAG00000001423	thumpd3	95	57.143	ENSNGAG00000021014	-	98	58.266	Nannospalax_galili
ENSXMAG00000001423	thumpd3	95	47.951	ENSNGAG00000001549	-	97	48.643	Nannospalax_galili
ENSXMAG00000001423	thumpd3	99	81.363	ENSNBRG00000004886	thumpd3	99	81.363	Neolamprologus_brichardi
ENSXMAG00000001423	thumpd3	97	56.151	ENSNLEG00000003863	THUMPD3	98	57.371	Nomascus_leucogenys
ENSXMAG00000001423	thumpd3	81	59.472	ENSMEUG00000009819	THUMPD3	99	59.472	Notamacropus_eugenii
ENSXMAG00000001423	thumpd3	81	59.666	ENSOPRG00000002020	THUMPD3	99	59.905	Ochotona_princeps
ENSXMAG00000001423	thumpd3	68	55.833	ENSODEG00000018242	THUMPD3	100	57.022	Octodon_degus
ENSXMAG00000001423	thumpd3	99	82.565	ENSONIG00000018977	thumpd3	99	82.565	Oreochromis_niloticus
ENSXMAG00000001423	thumpd3	79	57.005	ENSOANG00000014481	THUMPD3	97	57.005	Ornithorhynchus_anatinus
ENSXMAG00000001423	thumpd3	97	56.660	ENSOCUG00000010921	THUMPD3	96	57.968	Oryctolagus_cuniculus
ENSXMAG00000001423	thumpd3	99	77.419	ENSORLG00000000676	thumpd3	99	77.419	Oryzias_latipes
ENSXMAG00000001423	thumpd3	99	78.226	ENSORLG00020007509	thumpd3	99	78.226	Oryzias_latipes_hni
ENSXMAG00000001423	thumpd3	99	78.024	ENSORLG00015003615	thumpd3	99	78.024	Oryzias_latipes_hsok
ENSXMAG00000001423	thumpd3	99	76.056	ENSOMEG00000014115	thumpd3	99	77.062	Oryzias_melastigma
ENSXMAG00000001423	thumpd3	78	56.479	ENSOGAG00000017111	THUMPD3	99	57.702	Otolemur_garnettii
ENSXMAG00000001423	thumpd3	95	58.907	ENSOARG00000007139	THUMPD3	96	58.907	Ovis_aries
ENSXMAG00000001423	thumpd3	97	56.151	ENSPPAG00000025852	THUMPD3	97	57.371	Pan_paniscus
ENSXMAG00000001423	thumpd3	92	59.708	ENSPPRG00000008071	THUMPD3	94	59.708	Panthera_pardus
ENSXMAG00000001423	thumpd3	92	59.499	ENSPTIG00000017923	THUMPD3	94	59.499	Panthera_tigris_altaica
ENSXMAG00000001423	thumpd3	97	55.952	ENSPTRG00000014585	THUMPD3	97	57.171	Pan_troglodytes
ENSXMAG00000001423	thumpd3	97	55.666	ENSPANG00000016253	THUMPD3	98	56.574	Papio_anubis
ENSXMAG00000001423	thumpd3	92	67.155	ENSPKIG00000014009	thumpd3	96	67.155	Paramormyrops_kingsleyae
ENSXMAG00000001423	thumpd3	87	59.611	ENSPSIG00000007370	THUMPD3	90	59.611	Pelodiscus_sinensis
ENSXMAG00000001423	thumpd3	94	76.744	ENSPMGG00000017563	thumpd3	99	76.744	Periophthalmus_magnuspinnatus
ENSXMAG00000001423	thumpd3	88	60.659	ENSPEMG00000022411	Thumpd3	90	61.319	Peromyscus_maniculatus_bairdii
ENSXMAG00000001423	thumpd3	90	51.883	ENSPMAG00000001291	thumpd3	98	52.860	Petromyzon_marinus
ENSXMAG00000001423	thumpd3	96	56.112	ENSPCIG00000002049	THUMPD3	98	56.112	Phascolarctos_cinereus
ENSXMAG00000001423	thumpd3	100	95.800	ENSPFOG00000002318	thumpd3	100	95.800	Poecilia_formosa
ENSXMAG00000001423	thumpd3	100	95.800	ENSPLAG00000014804	thumpd3	100	95.800	Poecilia_latipinna
ENSXMAG00000001423	thumpd3	100	95.800	ENSPMEG00000000582	thumpd3	100	95.800	Poecilia_mexicana
ENSXMAG00000001423	thumpd3	100	96.208	ENSPREG00000009176	thumpd3	100	96.208	Poecilia_reticulata
ENSXMAG00000001423	thumpd3	86	44.622	ENSPPYG00000017616	-	89	44.622	Pongo_abelii
ENSXMAG00000001423	thumpd3	97	55.952	ENSPPYG00000029461	THUMPD3	98	57.171	Pongo_abelii
ENSXMAG00000001423	thumpd3	80	57.619	ENSPCAG00000015398	THUMPD3	99	58.513	Procavia_capensis
ENSXMAG00000001423	thumpd3	84	52.414	ENSPCOG00000023618	-	99	52.874	Propithecus_coquereli
ENSXMAG00000001423	thumpd3	93	49.793	ENSPCOG00000018095	-	94	51.245	Propithecus_coquereli
ENSXMAG00000001423	thumpd3	89	59.913	ENSPVAG00000008721	THUMPD3	91	59.913	Pteropus_vampyrus
ENSXMAG00000001423	thumpd3	99	81.363	ENSPNYG00000006918	thumpd3	99	81.363	Pundamilia_nyererei
ENSXMAG00000001423	thumpd3	93	69.462	ENSPNAG00000014936	thumpd3	96	69.462	Pygocentrus_nattereri
ENSXMAG00000001423	thumpd3	88	59.868	ENSRNOG00000006941	Thumpd3	90	59.868	Rattus_norvegicus
ENSXMAG00000001423	thumpd3	95	56.478	ENSRBIG00000035954	THUMPD3	98	57.404	Rhinopithecus_bieti
ENSXMAG00000001423	thumpd3	95	56.275	ENSRROG00000035734	THUMPD3	98	57.201	Rhinopithecus_roxellana
ENSXMAG00000001423	thumpd3	93	56.729	ENSSBOG00000023567	THUMPD3	99	58.038	Saimiri_boliviensis_boliviensis
ENSXMAG00000001423	thumpd3	90	57.143	ENSSHAG00000014467	THUMPD3	99	56.088	Sarcophilus_harrisii
ENSXMAG00000001423	thumpd3	90	69.651	ENSSFOG00015019210	thumpd3	92	69.651	Scleropages_formosus
ENSXMAG00000001423	thumpd3	99	79.600	ENSSMAG00000000609	thumpd3	97	81.624	Scophthalmus_maximus
ENSXMAG00000001423	thumpd3	99	81.764	ENSSDUG00000012179	thumpd3	99	83.824	Seriola_dumerili
ENSXMAG00000001423	thumpd3	99	82.164	ENSSLDG00000022028	thumpd3	99	82.164	Seriola_lalandi_dorsalis
ENSXMAG00000001423	thumpd3	78	65.839	ENSSARG00000002239	THUMPD3	80	65.839	Sorex_araneus
ENSXMAG00000001423	thumpd3	90	60.543	ENSSPUG00000017461	THUMPD3	94	60.543	Sphenodon_punctatus
ENSXMAG00000001423	thumpd3	99	82.731	ENSSPAG00000008345	thumpd3	98	82.731	Stegastes_partitus
ENSXMAG00000001423	thumpd3	93	58.487	ENSSSCG00000011542	THUMPD3	96	58.811	Sus_scrofa
ENSXMAG00000001423	thumpd3	86	60.889	ENSTGUG00000010440	THUMPD3	100	61.333	Taeniopygia_guttata
ENSXMAG00000001423	thumpd3	95	70.526	ENSTRUG00000004420	thumpd3	97	70.940	Takifugu_rubripes
ENSXMAG00000001423	thumpd3	93	77.944	ENSTNIG00000014627	thumpd3	100	77.944	Tetraodon_nigroviridis
ENSXMAG00000001423	thumpd3	97	54.653	ENSTBEG00000003450	THUMPD3	98	54.653	Tupaia_belangeri
ENSXMAG00000001423	thumpd3	95	57.637	ENSTTRG00000009694	THUMPD3	94	57.464	Tursiops_truncatus
ENSXMAG00000001423	thumpd3	97	56.634	ENSUAMG00000009412	THUMPD3	99	57.540	Ursus_americanus
ENSXMAG00000001423	thumpd3	97	59.674	ENSUMAG00000019241	THUMPD3	99	59.674	Ursus_maritimus
ENSXMAG00000001423	thumpd3	75	57.286	ENSVPAG00000002855	THUMPD3	94	58.794	Vicugna_pacos
ENSXMAG00000001423	thumpd3	88	61.623	ENSVVUG00000025278	THUMPD3	90	61.623	Vulpes_vulpes
ENSXMAG00000001423	thumpd3	87	59.519	ENSXETG00000001447	thumpd3	89	59.519	Xenopus_tropicalis
ENSXMAG00000001423	thumpd3	98	99.385	ENSXCOG00000000159	thumpd3	99	99.578	Xiphophorus_couchianus