EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001438 (Gene tree)
Gene ID: 102220370
Gene Symbol: srsf9
Alias: zgc:77449
Full Name: serine/arginine-rich splicing factor 9-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6779 bases
Position: chr8:13892800-13899578
Accession: 102220370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000041608	RRM_1	PF00076.22	3e-29	1	2
ENSXMAP00000041608	RRM_1	PF00076.22	3e-29	2	2
ENSXMAP00000001439	RRM_1	PF00076.22	5.2e-29	1	2
ENSXMAP00000001439	RRM_1	PF00076.22	5.2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000025048	-	642	-	ENSXMAP00000041608	213 (aa)	-	-
ENSXMAT00000001442	-	757	XM_005810077	ENSXMAP00000001439	245 (aa)	XP_005810134	M3ZGU7

Gene Model

Click here to download ENSXMAG00000001438's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG
xma05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001438	srsf9	98	65.072	ENSG00000111786	SRSF9	90	64.115	Homo_sapiens
ENSXMAG00000001438	srsf9	99	90.566	ENSAPOG00000013728	srsf9	86	90.566	Acanthochromis_polyacanthus
ENSXMAG00000001438	srsf9	98	66.029	ENSAMEG00000013294	SRSF9	93	64.115	Ailuropoda_melanoleuca
ENSXMAG00000001438	srsf9	100	82.520	ENSACIG00000015765	srsf9	96	82.857	Amphilophus_citrinellus
ENSXMAG00000001438	srsf9	99	90.566	ENSAOCG00000002992	srsf9	86	90.566	Amphiprion_ocellaris
ENSXMAG00000001438	srsf9	99	90.566	ENSAPEG00000011908	srsf9	86	90.566	Amphiprion_percula
ENSXMAG00000001438	srsf9	100	87.383	ENSATEG00000019984	srsf9	87	89.252	Anabas_testudineus
ENSXMAG00000001438	srsf9	97	63.285	ENSACAG00000002877	SRSF9	72	70.330	Anolis_carolinensis
ENSXMAG00000001438	srsf9	98	65.072	ENSANAG00000035910	SRSF9	91	64.115	Aotus_nancymaae
ENSXMAG00000001438	srsf9	99	85.377	ENSACLG00000015678	srsf9	96	82.041	Astatotilapia_calliptera
ENSXMAG00000001438	srsf9	100	83.673	ENSAMXG00000032281	srsf9	87	85.849	Astyanax_mexicanus
ENSXMAG00000001438	srsf9	98	65.072	ENSBTAG00000005584	-	90	64.115	Bos_taurus
ENSXMAG00000001438	srsf9	98	64.593	ENSBTAG00000012792	SRSF9	90	63.636	Bos_taurus
ENSXMAG00000001438	srsf9	98	65.072	ENSCJAG00000001187	SRSF9	90	64.115	Callithrix_jacchus
ENSXMAG00000001438	srsf9	98	65.550	ENSCAFG00000010314	SRSF9	90	64.115	Canis_familiaris
ENSXMAG00000001438	srsf9	98	65.550	ENSCAFG00020020612	SRSF9	90	64.115	Canis_lupus_dingo
ENSXMAG00000001438	srsf9	98	64.593	ENSCHIG00000025274	SRSF9	90	63.636	Capra_hircus
ENSXMAG00000001438	srsf9	98	60.287	ENSTSYG00000036169	-	89	55.024	Carlito_syrichta
ENSXMAG00000001438	srsf9	97	59.903	ENSTSYG00000034124	-	89	54.762	Carlito_syrichta
ENSXMAG00000001438	srsf9	98	53.589	ENSTSYG00000029305	-	88	49.282	Carlito_syrichta
ENSXMAG00000001438	srsf9	98	65.550	ENSTSYG00000006848	-	90	64.115	Carlito_syrichta
ENSXMAG00000001438	srsf9	98	65.072	ENSCPOG00000033486	SRSF9	90	64.115	Cavia_porcellus
ENSXMAG00000001438	srsf9	98	65.072	ENSCCAG00000036053	SRSF9	90	64.115	Cebus_capucinus
ENSXMAG00000001438	srsf9	85	58.011	ENSCATG00000000421	-	87	56.354	Cercocebus_atys
ENSXMAG00000001438	srsf9	98	65.072	ENSCATG00000021315	SRSF9	90	64.115	Cercocebus_atys
ENSXMAG00000001438	srsf9	98	65.072	ENSCLAG00000012289	SRSF9	90	64.115	Chinchilla_lanigera
ENSXMAG00000001438	srsf9	98	65.072	ENSCSAG00000002257	SRSF9	90	64.115	Chlorocebus_sabaeus
ENSXMAG00000001438	srsf9	74	62.658	ENSCHOG00000009241	SRSF9	94	58.861	Choloepus_hoffmanni
ENSXMAG00000001438	srsf9	97	66.184	ENSCPBG00000011340	SRSF9	87	65.550	Chrysemys_picta_bellii
ENSXMAG00000001438	srsf9	94	63.682	ENSCANG00000034161	SRSF9	86	62.687	Colobus_angolensis_palliatus
ENSXMAG00000001438	srsf9	98	65.550	ENSCGRG00001021965	Srsf9	90	64.115	Cricetulus_griseus_chok1gshd
ENSXMAG00000001438	srsf9	50	60.377	ENSCGRG00000001879	Srsf9	66	60.377	Cricetulus_griseus_crigri
ENSXMAG00000001438	srsf9	99	84.762	ENSCSEG00000015663	srsf9	92	82.629	Cynoglossus_semilaevis
ENSXMAG00000001438	srsf9	99	89.151	ENSCVAG00000021417	srsf9	91	86.996	Cyprinodon_variegatus
ENSXMAG00000001438	srsf9	98	87.619	ENSDARG00000008097	srsf9	87	87.850	Danio_rerio
ENSXMAG00000001438	srsf9	98	65.072	ENSDNOG00000012598	SRSF9	90	64.115	Dasypus_novemcinctus
ENSXMAG00000001438	srsf9	98	66.029	ENSDORG00000013162	Srsf9	90	64.115	Dipodomys_ordii
ENSXMAG00000001438	srsf9	98	51.675	ENSETEG00000002606	SRSF9	92	52.174	Echinops_telfairi
ENSXMAG00000001438	srsf9	98	65.072	ENSEASG00005004727	SRSF9	90	64.115	Equus_asinus_asinus
ENSXMAG00000001438	srsf9	98	65.072	ENSECAG00000009116	SRSF9	90	64.115	Equus_caballus
ENSXMAG00000001438	srsf9	69	78.000	ENSEEUG00000011655	SRSF9	67	78.000	Erinaceus_europaeus
ENSXMAG00000001438	srsf9	100	79.812	ENSELUG00000012644	SRSF9	85	78.733	Esox_lucius
ENSXMAG00000001438	srsf9	99	82.791	ENSELUG00000021669	srsf9	86	80.000	Esox_lucius
ENSXMAG00000001438	srsf9	98	65.550	ENSFCAG00000011011	SRSF9	90	64.115	Felis_catus
ENSXMAG00000001438	srsf9	50	60.377	ENSFDAG00000004364	SRSF9	66	60.377	Fukomys_damarensis
ENSXMAG00000001438	srsf9	99	92.488	ENSFHEG00000020851	srsf9	92	89.286	Fundulus_heteroclitus
ENSXMAG00000001438	srsf9	100	75.197	ENSGMOG00000007980	srsf9	87	81.279	Gadus_morhua
ENSXMAG00000001438	srsf9	100	99.184	ENSGAFG00000009123	srsf9	100	99.184	Gambusia_affinis
ENSXMAG00000001438	srsf9	99	81.532	ENSGACG00000016921	srsf9	87	81.532	Gasterosteus_aculeatus
ENSXMAG00000001438	srsf9	97	65.700	ENSGAGG00000016015	SRSF9	87	65.072	Gopherus_agassizii
ENSXMAG00000001438	srsf9	94	51.485	ENSGGOG00000027142	-	80	56.897	Gorilla_gorilla
ENSXMAG00000001438	srsf9	55	51.695	ENSGGOG00000022012	-	93	50.847	Gorilla_gorilla
ENSXMAG00000001438	srsf9	99	85.377	ENSHBUG00000019320	srsf9	100	82.041	Haplochromis_burtoni
ENSXMAG00000001438	srsf9	98	65.072	ENSHGLG00000014372	SRSF9	90	64.115	Heterocephalus_glaber_female
ENSXMAG00000001438	srsf9	87	62.162	ENSHGLG00000003582	-	89	60.215	Heterocephalus_glaber_female
ENSXMAG00000001438	srsf9	98	65.072	ENSHGLG00100013695	SRSF9	90	64.115	Heterocephalus_glaber_male
ENSXMAG00000001438	srsf9	87	62.162	ENSHGLG00100015198	-	86	60.106	Heterocephalus_glaber_male
ENSXMAG00000001438	srsf9	54	81.579	ENSHCOG00000018428	-	85	80.702	Hippocampus_comes
ENSXMAG00000001438	srsf9	52	80.000	ENSHCOG00000017326	srsf9	85	79.091	Hippocampus_comes
ENSXMAG00000001438	srsf9	100	65.000	ENSHCOG00000017311	srsf9	88	62.100	Hippocampus_comes
ENSXMAG00000001438	srsf9	100	84.082	ENSIPUG00000005511	srsf9	87	85.377	Ictalurus_punctatus
ENSXMAG00000001438	srsf9	98	65.072	ENSSTOG00000007344	SRSF9	90	64.115	Ictidomys_tridecemlineatus
ENSXMAG00000001438	srsf9	85	72.376	ENSJJAG00000013374	Srsf9	79	70.166	Jaculus_jaculus
ENSXMAG00000001438	srsf9	100	88.318	ENSKMAG00000007113	srsf9	87	88.318	Kryptolebias_marmoratus
ENSXMAG00000001438	srsf9	100	82.591	ENSLBEG00000017430	srsf9	83	85.047	Labrus_bergylta
ENSXMAG00000001438	srsf9	89	68.349	ENSLACG00000018228	SRSF9	91	72.249	Latimeria_chalumnae
ENSXMAG00000001438	srsf9	100	78.543	ENSLOCG00000004044	srsf9	83	86.321	Lepisosteus_oculatus
ENSXMAG00000001438	srsf9	81	60.694	ENSLAFG00000006381	SRSF9	93	59.884	Loxodonta_africana
ENSXMAG00000001438	srsf9	88	63.102	ENSMFAG00000039423	SRSF9	95	62.032	Macaca_fascicularis
ENSXMAG00000001438	srsf9	97	62.319	ENSMMUG00000016494	SRSF9	69	61.353	Macaca_mulatta
ENSXMAG00000001438	srsf9	85	60.773	ENSMMUG00000040941	-	85	59.116	Macaca_mulatta
ENSXMAG00000001438	srsf9	98	65.072	ENSMNEG00000044129	SRSF9	90	64.115	Macaca_nemestrina
ENSXMAG00000001438	srsf9	98	64.904	ENSMLEG00000041155	SRSF9	96	63.942	Mandrillus_leucophaeus
ENSXMAG00000001438	srsf9	100	86.854	ENSMAMG00000011581	srsf9	93	85.590	Mastacembelus_armatus
ENSXMAG00000001438	srsf9	99	85.377	ENSMZEG00005018422	srsf9	96	82.041	Maylandia_zebra
ENSXMAG00000001438	srsf9	98	65.072	ENSMAUG00000011403	Srsf9	90	63.636	Mesocricetus_auratus
ENSXMAG00000001438	srsf9	98	64.593	ENSMICG00000008674	SRSF9	90	63.636	Microcebus_murinus
ENSXMAG00000001438	srsf9	97	65.534	ENSMOCG00000021163	Srsf9	90	64.115	Microtus_ochrogaster
ENSXMAG00000001438	srsf9	100	84.793	ENSMMOG00000009349	srsf9	83	85.253	Mola_mola
ENSXMAG00000001438	srsf9	99	60.952	ENSMODG00000003146	SRSF9	93	61.429	Monodelphis_domestica
ENSXMAG00000001438	srsf9	100	84.375	ENSMALG00000011678	srsf9	87	84.375	Monopterus_albus
ENSXMAG00000001438	srsf9	98	66.029	MGP_CAROLIEiJ_G0027622	Srsf9	90	64.115	Mus_caroli
ENSXMAG00000001438	srsf9	98	66.029	ENSMUSG00000029538	Srsf9	90	64.115	Mus_musculus
ENSXMAG00000001438	srsf9	50	60.377	MGP_PahariEiJ_G0024202	-	66	60.377	Mus_pahari
ENSXMAG00000001438	srsf9	98	66.029	MGP_SPRETEiJ_G0028620	Srsf9	90	64.115	Mus_spretus
ENSXMAG00000001438	srsf9	98	64.929	ENSMPUG00000003193	SRSF9	90	64.455	Mustela_putorius_furo
ENSXMAG00000001438	srsf9	98	63.981	ENSMLUG00000010346	SRSF9	90	63.981	Myotis_lucifugus
ENSXMAG00000001438	srsf9	85	72.376	ENSNGAG00000012738	Srsf9	79	69.613	Nannospalax_galili
ENSXMAG00000001438	srsf9	99	85.377	ENSNBRG00000003888	srsf9	100	82.041	Neolamprologus_brichardi
ENSXMAG00000001438	srsf9	98	65.072	ENSNLEG00000015661	SRSF9	90	64.115	Nomascus_leucogenys
ENSXMAG00000001438	srsf9	95	62.069	ENSNLEG00000033316	-	89	60.526	Nomascus_leucogenys
ENSXMAG00000001438	srsf9	71	69.079	ENSMEUG00000004069	SRSF9	92	69.079	Notamacropus_eugenii
ENSXMAG00000001438	srsf9	98	65.072	ENSOPRG00000004234	SRSF9	90	63.636	Ochotona_princeps
ENSXMAG00000001438	srsf9	53	65.487	ENSODEG00000006061	SRSF9	88	64.912	Octodon_degus
ENSXMAG00000001438	srsf9	99	85.377	ENSONIG00000013974	srsf9	100	82.041	Oreochromis_niloticus
ENSXMAG00000001438	srsf9	98	64.593	ENSOCUG00000024603	SRSF9	90	63.636	Oryctolagus_cuniculus
ENSXMAG00000001438	srsf9	100	86.854	ENSORLG00000023709	srsf9	94	81.223	Oryzias_latipes
ENSXMAG00000001438	srsf9	100	86.854	ENSORLG00020017678	srsf9	94	81.223	Oryzias_latipes_hni
ENSXMAG00000001438	srsf9	100	86.854	ENSORLG00015004857	srsf9	94	81.223	Oryzias_latipes_hsok
ENSXMAG00000001438	srsf9	100	87.793	ENSOMEG00000002601	srsf9	94	82.096	Oryzias_melastigma
ENSXMAG00000001438	srsf9	98	65.072	ENSOGAG00000003852	SRSF9	90	64.115	Otolemur_garnettii
ENSXMAG00000001438	srsf9	98	64.115	ENSOARG00000012402	SRSF9	78	70.166	Ovis_aries
ENSXMAG00000001438	srsf9	95	63.861	ENSPPAG00000034420	SRSF9	71	69.540	Pan_paniscus
ENSXMAG00000001438	srsf9	55	56.780	ENSPPAG00000026547	-	95	54.098	Pan_paniscus
ENSXMAG00000001438	srsf9	98	65.550	ENSPPRG00000001309	SRSF9	90	64.115	Panthera_pardus
ENSXMAG00000001438	srsf9	74	60.759	ENSPTIG00000010327	SRSF9	67	58.861	Panthera_tigris_altaica
ENSXMAG00000001438	srsf9	98	65.072	ENSPTRG00000005535	SRSF9	90	64.115	Pan_troglodytes
ENSXMAG00000001438	srsf9	55	56.780	ENSPTRG00000052688	-	95	54.098	Pan_troglodytes
ENSXMAG00000001438	srsf9	98	65.072	ENSPANG00000016072	SRSF9	90	64.115	Papio_anubis
ENSXMAG00000001438	srsf9	100	80.645	ENSPKIG00000023787	srsf9	86	86.385	Paramormyrops_kingsleyae
ENSXMAG00000001438	srsf9	99	85.308	ENSPKIG00000024851	SRSF9	82	85.446	Paramormyrops_kingsleyae
ENSXMAG00000001438	srsf9	100	70.238	ENSPMGG00000016215	srsf9	87	72.146	Periophthalmus_magnuspinnatus
ENSXMAG00000001438	srsf9	98	65.550	ENSPEMG00000016311	Srsf9	90	63.636	Peromyscus_maniculatus_bairdii
ENSXMAG00000001438	srsf9	99	64.762	ENSPCIG00000025998	SRSF9	83	62.381	Phascolarctos_cinereus
ENSXMAG00000001438	srsf9	100	96.414	ENSPFOG00000019792	srsf9	100	96.414	Poecilia_formosa
ENSXMAG00000001438	srsf9	100	96.414	ENSPLAG00000022740	srsf9	100	96.414	Poecilia_latipinna
ENSXMAG00000001438	srsf9	100	96.813	ENSPMEG00000008809	srsf9	100	96.813	Poecilia_mexicana
ENSXMAG00000001438	srsf9	100	94.024	ENSPREG00000013165	srsf9	97	94.024	Poecilia_reticulata
ENSXMAG00000001438	srsf9	98	64.115	ENSPPYG00000019910	-	90	63.158	Pongo_abelii
ENSXMAG00000001438	srsf9	98	65.072	ENSPPYG00000005031	-	90	64.115	Pongo_abelii
ENSXMAG00000001438	srsf9	98	62.201	ENSPPYG00000029896	-	90	61.244	Pongo_abelii
ENSXMAG00000001438	srsf9	62	67.939	ENSPCAG00000013889	SRSF9	78	66.923	Procavia_capensis
ENSXMAG00000001438	srsf9	98	64.593	ENSPCOG00000015115	SRSF9	90	63.636	Propithecus_coquereli
ENSXMAG00000001438	srsf9	98	65.072	ENSPVAG00000002229	SRSF9	90	64.115	Pteropus_vampyrus
ENSXMAG00000001438	srsf9	99	85.377	ENSPNYG00000008644	srsf9	100	82.041	Pundamilia_nyererei
ENSXMAG00000001438	srsf9	98	85.167	ENSPNAG00000003588	srsf9	87	85.446	Pygocentrus_nattereri
ENSXMAG00000001438	srsf9	98	66.986	ENSRNOG00000001163	Srsf9	90	64.115	Rattus_norvegicus
ENSXMAG00000001438	srsf9	74	60.127	ENSRBIG00000042683	SRSF9	81	58.861	Rhinopithecus_bieti
ENSXMAG00000001438	srsf9	75	60.625	ENSRROG00000041980	SRSF9	90	55.618	Rhinopithecus_roxellana
ENSXMAG00000001438	srsf9	55	66.102	ENSSBOG00000017305	SRSF9	86	64.407	Saimiri_boliviensis_boliviensis
ENSXMAG00000001438	srsf9	75	59.627	ENSSHAG00000005685	SRSF9	94	56.522	Sarcophilus_harrisii
ENSXMAG00000001438	srsf9	100	85.981	ENSSFOG00015002476	SRSF9	86	85.446	Scleropages_formosus
ENSXMAG00000001438	srsf9	100	81.048	ENSSFOG00015017303	srsf9	86	86.385	Scleropages_formosus
ENSXMAG00000001438	srsf9	100	84.186	ENSSMAG00000002039	srsf9	84	84.651	Scophthalmus_maximus
ENSXMAG00000001438	srsf9	100	87.963	ENSSDUG00000018908	srsf9	87	89.352	Seriola_dumerili
ENSXMAG00000001438	srsf9	100	87.963	ENSSLDG00000012305	srsf9	87	89.352	Seriola_lalandi_dorsalis
ENSXMAG00000001438	srsf9	74	60.759	ENSSARG00000003434	SRSF9	94	58.861	Sorex_araneus
ENSXMAG00000001438	srsf9	97	64.563	ENSSPUG00000015680	SRSF9	87	65.550	Sphenodon_punctatus
ENSXMAG00000001438	srsf9	99	87.907	ENSSPAG00000006285	srsf9	87	88.372	Stegastes_partitus
ENSXMAG00000001438	srsf9	98	65.072	ENSSSCG00000009906	SRSF9	90	64.115	Sus_scrofa
ENSXMAG00000001438	srsf9	75	58.491	ENSSSCG00000038585	-	85	49.686	Sus_scrofa
ENSXMAG00000001438	srsf9	100	64.545	ENSTRUG00000012723	srsf9	85	64.545	Takifugu_rubripes
ENSXMAG00000001438	srsf9	97	85.024	ENSTNIG00000000697	srsf9	86	84.977	Tetraodon_nigroviridis
ENSXMAG00000001438	srsf9	80	69.006	ENSTBEG00000008499	SRSF9	83	68.235	Tupaia_belangeri
ENSXMAG00000001438	srsf9	92	62.944	ENSTTRG00000000145	SRSF9	95	61.929	Tursiops_truncatus
ENSXMAG00000001438	srsf9	98	65.072	ENSUAMG00000015527	SRSF9	90	64.115	Ursus_americanus
ENSXMAG00000001438	srsf9	87	53.646	ENSUMAG00000006151	SRSF9	69	59.756	Ursus_maritimus
ENSXMAG00000001438	srsf9	98	65.550	ENSVVUG00000021065	SRSF9	90	64.115	Vulpes_vulpes
ENSXMAG00000001438	srsf9	85	69.231	ENSXETG00000026940	srsf9	79	66.667	Xenopus_tropicalis