EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001454 (Gene tree)
Gene ID: 102220012
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 23541 bases
Position: chr11:5125695-5149235
Accession: 102220012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000035182	tRNA-synt_1g	PF09334.11	2.4e-15	1	1
ENSXMAP00000001491	tRNA-synt_1g	PF09334.11	2.9e-15	1	1
ENSXMAP00000035182	Anticodon_1	PF08264.13	1.1e-14	1	1
ENSXMAP00000001491	Anticodon_1	PF08264.13	1.2e-14	1	1
ENSXMAP00000035182	tRNA-synt_1	PF00133.22	1.5e-37	1	2
ENSXMAP00000035182	tRNA-synt_1	PF00133.22	1.5e-37	2	2
ENSXMAP00000001491	tRNA-synt_1	PF00133.22	9.4e-37	1	2
ENSXMAP00000001491	tRNA-synt_1	PF00133.22	9.4e-37	2	2
ENSXMAP00000035182	tRNA-synt_1e	PF01406.19	1.1e-06	1	1
ENSXMAP00000001491	tRNA-synt_1e	PF01406.19	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000001494	-	5873	XM_005805441	ENSXMAP00000001491	1184 (aa)	XP_005805498	M3ZGZ9
ENSXMAT00000027356	-	3519	-	ENSXMAP00000035182	1172 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000001454's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001454	larsb	100	78.041	ENSG00000133706	LARS	100	78.742	Homo_sapiens
ENSXMAG00000001454	larsb	100	93.002	ENSAPOG00000010585	larsb	100	93.125	Acanthochromis_polyacanthus
ENSXMAG00000001454	larsb	99	77.872	ENSAMEG00000017584	LARS	100	77.872	Ailuropoda_melanoleuca
ENSXMAG00000001454	larsb	100	90.556	ENSACIG00000014026	larsb	100	90.556	Amphilophus_citrinellus
ENSXMAG00000001454	larsb	100	93.159	ENSAOCG00000016931	larsb	100	93.159	Amphiprion_ocellaris
ENSXMAG00000001454	larsb	100	93.243	ENSAPEG00000017720	larsb	100	93.243	Amphiprion_percula
ENSXMAG00000001454	larsb	100	87.521	ENSATEG00000010441	larsb	99	87.268	Anabas_testudineus
ENSXMAG00000001454	larsb	96	78.128	ENSAPLG00000008145	LARS	100	78.303	Anas_platyrhynchos
ENSXMAG00000001454	larsb	100	77.365	ENSACAG00000013916	LARS	99	77.515	Anolis_carolinensis
ENSXMAG00000001454	larsb	100	69.595	ENSANAG00000014375	LARS	100	69.595	Aotus_nancymaae
ENSXMAG00000001454	larsb	100	92.821	ENSACLG00000010881	larsb	100	92.821	Astatotilapia_calliptera
ENSXMAG00000001454	larsb	100	86.835	ENSAMXG00000019979	larsb	100	86.582	Astyanax_mexicanus
ENSXMAG00000001454	larsb	100	77.449	ENSBTAG00000006765	LARS	100	77.449	Bos_taurus
ENSXMAG00000001454	larsb	99	55.117	WBGene00003073	lars-1	99	55.574	Caenorhabditis_elegans
ENSXMAG00000001454	larsb	100	78.041	ENSCJAG00000021314	LARS	100	78.742	Callithrix_jacchus
ENSXMAG00000001454	larsb	100	78.294	ENSCAFG00000006431	LARS	100	78.294	Canis_familiaris
ENSXMAG00000001454	larsb	99	78.342	ENSCAFG00020025009	LARS	99	78.342	Canis_lupus_dingo
ENSXMAG00000001454	larsb	100	77.534	ENSCHIG00000014949	LARS	100	77.618	Capra_hircus
ENSXMAG00000001454	larsb	100	77.618	ENSTSYG00000001253	LARS	100	77.618	Carlito_syrichta
ENSXMAG00000001454	larsb	96	62.090	ENSCAPG00000015676	LARS	97	62.267	Cavia_aperea
ENSXMAG00000001454	larsb	100	76.520	ENSCPOG00000012329	LARS	100	76.520	Cavia_porcellus
ENSXMAG00000001454	larsb	99	78.493	ENSCCAG00000020789	LARS	99	78.493	Cebus_capucinus
ENSXMAG00000001454	larsb	97	78.242	ENSCATG00000033463	LARS	100	78.565	Cercocebus_atys
ENSXMAG00000001454	larsb	100	77.196	ENSCLAG00000011193	LARS	100	77.196	Chinchilla_lanigera
ENSXMAG00000001454	larsb	99	78.224	ENSCSAG00000012280	LARS	97	78.224	Chlorocebus_sabaeus
ENSXMAG00000001454	larsb	90	71.769	ENSCHOG00000009309	LARS	90	71.769	Choloepus_hoffmanni
ENSXMAG00000001454	larsb	99	79.459	ENSCPBG00000008415	LARS	99	80.179	Chrysemys_picta_bellii
ENSXMAG00000001454	larsb	99	63.744	ENSCING00000008535	-	99	63.744	Ciona_intestinalis
ENSXMAG00000001454	larsb	99	63.047	ENSCSAVG00000009040	-	100	68.081	Ciona_savignyi
ENSXMAG00000001454	larsb	100	78.209	ENSCANG00000031137	LARS	100	78.209	Colobus_angolensis_palliatus
ENSXMAG00000001454	larsb	93	72.157	ENSCGRG00001004647	Lars	99	72.157	Cricetulus_griseus_chok1gshd
ENSXMAG00000001454	larsb	100	73.840	ENSCGRG00000007284	Lars	100	73.840	Cricetulus_griseus_crigri
ENSXMAG00000001454	larsb	100	91.315	ENSCSEG00000014984	larsb	100	91.062	Cynoglossus_semilaevis
ENSXMAG00000001454	larsb	100	95.439	ENSCVAG00000014685	larsb	100	95.439	Cyprinodon_variegatus
ENSXMAG00000001454	larsb	68	87.735	ENSDARG00000019280	larsb	100	87.735	Danio_rerio
ENSXMAG00000001454	larsb	96	77.138	ENSDNOG00000017963	LARS	100	77.574	Dasypus_novemcinctus
ENSXMAG00000001454	larsb	100	72.789	ENSDORG00000014913	Lars	100	72.789	Dipodomys_ordii
ENSXMAG00000001454	larsb	99	57.718	FBgn0284253	LeuRS	99	58.221	Drosophila_melanogaster
ENSXMAG00000001454	larsb	94	63.016	ENSETEG00000003145	LARS	100	63.016	Echinops_telfairi
ENSXMAG00000001454	larsb	92	60.747	ENSEBUG00000014985	larsb	97	60.747	Eptatretus_burgeri
ENSXMAG00000001454	larsb	100	77.956	ENSEASG00005020569	LARS	100	78.145	Equus_asinus_asinus
ENSXMAG00000001454	larsb	100	77.872	ENSECAG00000008963	LARS	100	78.565	Equus_caballus
ENSXMAG00000001454	larsb	92	62.590	ENSEEUG00000014854	LARS	92	62.590	Erinaceus_europaeus
ENSXMAG00000001454	larsb	100	86.149	ENSELUG00000023311	larsb	100	86.149	Esox_lucius
ENSXMAG00000001454	larsb	99	77.919	ENSFCAG00000008715	LARS	100	79.607	Felis_catus
ENSXMAG00000001454	larsb	100	78.143	ENSFALG00000003209	LARS	93	77.975	Ficedula_albicollis
ENSXMAG00000001454	larsb	100	76.774	ENSFDAG00000020764	LARS	100	76.774	Fukomys_damarensis
ENSXMAG00000001454	larsb	91	94.239	ENSFHEG00000010437	larsb	100	94.239	Fundulus_heteroclitus
ENSXMAG00000001454	larsb	99	86.221	ENSGMOG00000013645	larsb	99	86.221	Gadus_morhua
ENSXMAG00000001454	larsb	100	78.283	ENSGALG00000007494	LARS	100	78.367	Gallus_gallus
ENSXMAG00000001454	larsb	100	97.466	ENSGAFG00000005029	larsb	100	97.466	Gambusia_affinis
ENSXMAG00000001454	larsb	99	88.156	ENSGACG00000020720	larsb	99	88.071	Gasterosteus_aculeatus
ENSXMAG00000001454	larsb	99	78.952	ENSGAGG00000002353	LARS	99	78.698	Gopherus_agassizii
ENSXMAG00000001454	larsb	100	78.041	ENSGGOG00000004103	LARS	100	78.041	Gorilla_gorilla
ENSXMAG00000001454	larsb	99	90.917	ENSHBUG00000003051	larsb	100	93.013	Haplochromis_burtoni
ENSXMAG00000001454	larsb	100	76.689	ENSHGLG00000006937	LARS	100	76.689	Heterocephalus_glaber_female
ENSXMAG00000001454	larsb	100	76.689	ENSHGLG00100002801	LARS	100	76.689	Heterocephalus_glaber_male
ENSXMAG00000001454	larsb	99	89.772	ENSHCOG00000003651	larsb	100	89.772	Hippocampus_comes
ENSXMAG00000001454	larsb	100	84.979	ENSIPUG00000010756	lars	100	84.807	Ictalurus_punctatus
ENSXMAG00000001454	larsb	100	77.787	ENSSTOG00000002356	LARS	100	77.787	Ictidomys_tridecemlineatus
ENSXMAG00000001454	larsb	100	76.351	ENSJJAG00000015265	Lars	100	76.351	Jaculus_jaculus
ENSXMAG00000001454	larsb	100	93.165	ENSKMAG00000009903	larsb	100	93.165	Kryptolebias_marmoratus
ENSXMAG00000001454	larsb	100	92.152	ENSLBEG00000025237	larsb	100	92.152	Labrus_bergylta
ENSXMAG00000001454	larsb	100	78.872	ENSLACG00000009321	LARS	100	79.125	Latimeria_chalumnae
ENSXMAG00000001454	larsb	99	83.333	ENSLOCG00000010442	larsb	99	83.333	Lepisosteus_oculatus
ENSXMAG00000001454	larsb	99	77.365	ENSLAFG00000000318	LARS	100	77.327	Loxodonta_africana
ENSXMAG00000001454	larsb	100	78.125	ENSMFAG00000038685	LARS	100	78.041	Macaca_fascicularis
ENSXMAG00000001454	larsb	100	78.125	ENSMMUG00000029787	LARS	100	78.041	Macaca_mulatta
ENSXMAG00000001454	larsb	99	76.142	ENSMNEG00000044014	LARS	99	76.227	Macaca_nemestrina
ENSXMAG00000001454	larsb	99	78.173	ENSMLEG00000037563	LARS	99	78.173	Mandrillus_leucophaeus
ENSXMAG00000001454	larsb	100	92.821	ENSMAMG00000021385	larsb	100	92.821	Mastacembelus_armatus
ENSXMAG00000001454	larsb	100	92.736	ENSMZEG00005002662	larsb	100	92.736	Maylandia_zebra
ENSXMAG00000001454	larsb	96	78.478	ENSMGAG00000009388	LARS	100	79.003	Meleagris_gallopavo
ENSXMAG00000001454	larsb	99	67.597	ENSMAUG00000003063	Lars	99	67.597	Mesocricetus_auratus
ENSXMAG00000001454	larsb	100	65.034	ENSMICG00000035435	-	100	65.034	Microcebus_murinus
ENSXMAG00000001454	larsb	100	78.378	ENSMICG00000035589	-	100	78.378	Microcebus_murinus
ENSXMAG00000001454	larsb	100	75.949	ENSMOCG00000002092	Lars	100	75.949	Microtus_ochrogaster
ENSXMAG00000001454	larsb	100	87.573	ENSMMOG00000013802	larsb	100	87.322	Mola_mola
ENSXMAG00000001454	larsb	99	72.426	ENSMODG00000010231	LARS	99	72.426	Monodelphis_domestica
ENSXMAG00000001454	larsb	99	89.655	ENSMALG00000018444	larsb	99	89.655	Monopterus_albus
ENSXMAG00000001454	larsb	100	76.540	MGP_CAROLIEiJ_G0022225	Lars	100	76.540	Mus_caroli
ENSXMAG00000001454	larsb	100	76.118	ENSMUSG00000024493	Lars	100	76.118	Mus_musculus
ENSXMAG00000001454	larsb	100	76.203	MGP_PahariEiJ_G0018958	Lars	100	76.203	Mus_pahari
ENSXMAG00000001454	larsb	100	76.456	MGP_SPRETEiJ_G0023135	Lars	100	76.456	Mus_spretus
ENSXMAG00000001454	larsb	100	78.041	ENSMPUG00000007844	LARS	100	78.041	Mustela_putorius_furo
ENSXMAG00000001454	larsb	99	77.177	ENSMLUG00000001125	LARS	100	77.177	Myotis_lucifugus
ENSXMAG00000001454	larsb	100	76.351	ENSNGAG00000011596	Lars	100	76.351	Nannospalax_galili
ENSXMAG00000001454	larsb	100	92.905	ENSNBRG00000005764	larsb	100	92.905	Neolamprologus_brichardi
ENSXMAG00000001454	larsb	99	77.665	ENSNLEG00000009816	LARS	99	77.665	Nomascus_leucogenys
ENSXMAG00000001454	larsb	53	80.180	ENSMEUG00000002332	-	60	75.610	Notamacropus_eugenii
ENSXMAG00000001454	larsb	79	79.032	ENSOPRG00000003076	LARS	83	79.032	Ochotona_princeps
ENSXMAG00000001454	larsb	99	75.106	ENSODEG00000004882	LARS	99	75.106	Octodon_degus
ENSXMAG00000001454	larsb	100	93.243	ENSONIG00000008493	larsb	100	93.243	Oreochromis_niloticus
ENSXMAG00000001454	larsb	100	75.526	ENSOANG00000005755	LARS	99	75.589	Ornithorhynchus_anatinus
ENSXMAG00000001454	larsb	100	77.703	ENSOCUG00000015684	LARS	100	77.703	Oryctolagus_cuniculus
ENSXMAG00000001454	larsb	100	92.230	ENSORLG00000001622	larsb	100	92.230	Oryzias_latipes
ENSXMAG00000001454	larsb	100	92.145	ENSORLG00020019950	larsb	100	92.145	Oryzias_latipes_hni
ENSXMAG00000001454	larsb	100	92.314	ENSORLG00015003895	larsb	100	92.314	Oryzias_latipes_hsok
ENSXMAG00000001454	larsb	100	92.399	ENSOMEG00000005677	larsb	100	92.399	Oryzias_melastigma
ENSXMAG00000001454	larsb	96	76.000	ENSOGAG00000008750	LARS	100	76.000	Otolemur_garnettii
ENSXMAG00000001454	larsb	99	77.346	ENSOARG00000002454	-	100	77.430	Ovis_aries
ENSXMAG00000001454	larsb	100	77.365	ENSOARG00000015911	-	99	77.280	Ovis_aries
ENSXMAG00000001454	larsb	99	78.088	ENSPPAG00000027964	LARS	99	78.088	Pan_paniscus
ENSXMAG00000001454	larsb	100	78.125	ENSPPRG00000023492	LARS	100	78.125	Panthera_pardus
ENSXMAG00000001454	larsb	100	77.956	ENSPTIG00000013110	LARS	100	77.956	Panthera_tigris_altaica
ENSXMAG00000001454	larsb	100	77.956	ENSPTRG00000017372	LARS	100	77.872	Pan_troglodytes
ENSXMAG00000001454	larsb	100	77.872	ENSPANG00000002663	LARS	100	77.956	Papio_anubis
ENSXMAG00000001454	larsb	98	83.851	ENSPKIG00000006650	larsb	99	80.808	Paramormyrops_kingsleyae
ENSXMAG00000001454	larsb	99	78.952	ENSPSIG00000015641	LARS	100	78.698	Pelodiscus_sinensis
ENSXMAG00000001454	larsb	68	92.625	ENSPMGG00000019556	LARS	100	92.625	Periophthalmus_magnuspinnatus
ENSXMAG00000001454	larsb	100	72.236	ENSPEMG00000010933	Lars	100	72.236	Peromyscus_maniculatus_bairdii
ENSXMAG00000001454	larsb	51	61.157	ENSPMAG00000005301	larsb	99	61.157	Petromyzon_marinus
ENSXMAG00000001454	larsb	100	76.267	ENSPCIG00000030572	LARS	100	76.267	Phascolarctos_cinereus
ENSXMAG00000001454	larsb	100	97.551	ENSPFOG00000002361	larsb	100	97.551	Poecilia_formosa
ENSXMAG00000001454	larsb	100	97.466	ENSPLAG00000016550	larsb	100	97.466	Poecilia_latipinna
ENSXMAG00000001454	larsb	100	97.382	ENSPMEG00000018422	larsb	100	97.382	Poecilia_mexicana
ENSXMAG00000001454	larsb	100	97.044	ENSPREG00000005668	larsb	100	97.044	Poecilia_reticulata
ENSXMAG00000001454	larsb	99	76.565	ENSPPYG00000015908	LARS	97	76.565	Pongo_abelii
ENSXMAG00000001454	larsb	89	68.750	ENSPCAG00000005621	LARS	99	68.750	Procavia_capensis
ENSXMAG00000001454	larsb	100	77.027	ENSPCOG00000019325	LARS	100	77.111	Propithecus_coquereli
ENSXMAG00000001454	larsb	96	70.315	ENSPVAG00000011237	LARS	99	70.665	Pteropus_vampyrus
ENSXMAG00000001454	larsb	100	92.736	ENSPNYG00000015254	larsb	100	92.736	Pundamilia_nyererei
ENSXMAG00000001454	larsb	100	85.220	ENSPNAG00000027191	larsb	100	85.220	Pygocentrus_nattereri
ENSXMAG00000001454	larsb	100	76.203	ENSRNOG00000018304	Lars	100	76.203	Rattus_norvegicus
ENSXMAG00000001454	larsb	94	77.110	ENSRBIG00000043198	LARS	99	77.110	Rhinopithecus_bieti
ENSXMAG00000001454	larsb	90	45.520	YPL160W	CDC60	99	45.520	Saccharomyces_cerevisiae
ENSXMAG00000001454	larsb	99	75.550	ENSSBOG00000026661	LARS	100	78.417	Saimiri_boliviensis_boliviensis
ENSXMAG00000001454	larsb	100	77.553	ENSSHAG00000006084	LARS	100	77.553	Sarcophilus_harrisii
ENSXMAG00000001454	larsb	97	84.965	ENSSFOG00015018117	larsb	90	84.965	Scleropages_formosus
ENSXMAG00000001454	larsb	88	92.138	ENSSMAG00000004078	larsb	97	92.042	Scophthalmus_maximus
ENSXMAG00000001454	larsb	100	92.821	ENSSDUG00000021142	larsb	100	92.821	Seriola_dumerili
ENSXMAG00000001454	larsb	100	92.821	ENSSLDG00000007054	larsb	100	92.821	Seriola_lalandi_dorsalis
ENSXMAG00000001454	larsb	85	70.000	ENSSARG00000013481	LARS	85	70.000	Sorex_araneus
ENSXMAG00000001454	larsb	100	77.993	ENSSPUG00000013805	LARS	100	78.246	Sphenodon_punctatus
ENSXMAG00000001454	larsb	100	93.243	ENSSPAG00000012124	larsb	100	93.243	Stegastes_partitus
ENSXMAG00000001454	larsb	100	74.662	ENSSSCG00000014411	LARS	100	74.662	Sus_scrofa
ENSXMAG00000001454	larsb	99	77.937	ENSTGUG00000000092	-	99	77.768	Taeniopygia_guttata
ENSXMAG00000001454	larsb	100	89.020	ENSTRUG00000005358	larsb	100	89.020	Takifugu_rubripes
ENSXMAG00000001454	larsb	99	85.450	ENSTNIG00000018214	larsb	100	85.366	Tetraodon_nigroviridis
ENSXMAG00000001454	larsb	91	75.494	ENSTBEG00000003757	LARS	94	75.494	Tupaia_belangeri
ENSXMAG00000001454	larsb	96	75.197	ENSTTRG00000016712	LARS	96	75.197	Tursiops_truncatus
ENSXMAG00000001454	larsb	94	79.032	ENSUAMG00000019907	LARS	99	79.032	Ursus_americanus
ENSXMAG00000001454	larsb	100	77.956	ENSUMAG00000010585	LARS	100	77.956	Ursus_maritimus
ENSXMAG00000001454	larsb	92	77.517	ENSVPAG00000000557	LARS	92	77.517	Vicugna_pacos
ENSXMAG00000001454	larsb	100	78.209	ENSVVUG00000021124	LARS	100	78.209	Vulpes_vulpes
ENSXMAG00000001454	larsb	100	79.595	ENSXETG00000002320	lars	100	79.427	Xenopus_tropicalis