EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001461 (Gene tree)
Gene ID: 102235833
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6868 bases
Position: chr14:10677320-10684187
Accession: 102235833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000001447	zf-C2H2	PF00096.26	2.8e-18	1	2
ENSXMAP00000001447	zf-C2H2	PF00096.26	2.8e-18	2	2
ENSXMAP00000001447	zf-met	PF12874.7	6.4e-10	1	2
ENSXMAP00000001447	zf-met	PF12874.7	6.4e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000001450	-	5240	XM_014471829	ENSXMAP00000001447	1209 (aa)	XP_014327315	M3ZGV5

Gene Model

Click here to download ENSXMAG00000001461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001461	si:ch211-212k18.5	99	73.556	ENSAPOG00000013387	si:ch211-212k18.5	99	73.892	Acanthochromis_polyacanthus
ENSXMAG00000001461	si:ch211-212k18.5	73	67.568	ENSAPOG00000015347	sall2	55	67.568	Acanthochromis_polyacanthus
ENSXMAG00000001461	si:ch211-212k18.5	80	78.682	ENSACIG00000019922	si:ch211-212k18.5	99	79.485	Amphilophus_citrinellus
ENSXMAG00000001461	si:ch211-212k18.5	99	71.626	ENSAOCG00000010737	si:ch211-212k18.5	99	71.721	Amphiprion_ocellaris
ENSXMAG00000001461	si:ch211-212k18.5	73	67.568	ENSAOCG00000016559	sall2	57	50.769	Amphiprion_ocellaris
ENSXMAG00000001461	si:ch211-212k18.5	99	71.870	ENSAPEG00000006751	si:ch211-212k18.5	99	71.967	Amphiprion_percula
ENSXMAG00000001461	si:ch211-212k18.5	55	46.388	ENSAPEG00000020215	sall2	68	48.248	Amphiprion_percula
ENSXMAG00000001461	si:ch211-212k18.5	79	80.256	ENSATEG00000001254	si:ch211-212k18.5	99	80.372	Anabas_testudineus
ENSXMAG00000001461	si:ch211-212k18.5	57	45.173	ENSATEG00000007303	sall2	61	45.281	Anabas_testudineus
ENSXMAG00000001461	si:ch211-212k18.5	58	64.865	ENSACLG00000019867	sall2	59	46.579	Astatotilapia_calliptera
ENSXMAG00000001461	si:ch211-212k18.5	99	73.153	ENSACLG00000009709	si:ch211-212k18.5	99	73.300	Astatotilapia_calliptera
ENSXMAG00000001461	si:ch211-212k18.5	54	49.429	ENSAMXG00000020956	sall2	57	49.133	Astyanax_mexicanus
ENSXMAG00000001461	si:ch211-212k18.5	99	54.641	ENSAMXG00000010979	si:ch211-212k18.5	99	53.802	Astyanax_mexicanus
ENSXMAG00000001461	si:ch211-212k18.5	82	38.768	ENSCSEG00000021148	sall2	50	44.507	Cynoglossus_semilaevis
ENSXMAG00000001461	si:ch211-212k18.5	99	68.553	ENSCSEG00000004426	si:ch211-212k18.5	99	67.866	Cynoglossus_semilaevis
ENSXMAG00000001461	si:ch211-212k18.5	99	85.950	ENSCVAG00000007475	si:ch211-212k18.5	99	86.083	Cyprinodon_variegatus
ENSXMAG00000001461	si:ch211-212k18.5	60	49.237	ENSDARG00000075116	sall2	66	59.184	Danio_rerio
ENSXMAG00000001461	si:ch211-212k18.5	99	52.960	ENSDARG00000103316	si:ch211-212k18.5	99	52.013	Danio_rerio
ENSXMAG00000001461	si:ch211-212k18.5	99	55.415	ENSELUG00000024534	si:ch211-212k18.5	99	55.644	Esox_lucius
ENSXMAG00000001461	si:ch211-212k18.5	99	86.529	ENSFHEG00000017264	si:ch211-212k18.5	99	86.583	Fundulus_heteroclitus
ENSXMAG00000001461	si:ch211-212k18.5	100	96.532	ENSGAFG00000003746	si:ch211-212k18.5	100	96.532	Gambusia_affinis
ENSXMAG00000001461	si:ch211-212k18.5	99	73.317	ENSHBUG00000019672	si:ch211-212k18.5	99	73.689	Haplochromis_burtoni
ENSXMAG00000001461	si:ch211-212k18.5	73	64.865	ENSHBUG00000002882	sall2	53	46.579	Haplochromis_burtoni
ENSXMAG00000001461	si:ch211-212k18.5	98	58.863	ENSHCOG00000002842	si:ch211-212k18.5	99	57.705	Hippocampus_comes
ENSXMAG00000001461	si:ch211-212k18.5	99	51.724	ENSIPUG00000002559	sall2	95	52.314	Ictalurus_punctatus
ENSXMAG00000001461	si:ch211-212k18.5	100	75.000	ENSKMAG00000019657	si:ch211-212k18.5	98	75.745	Kryptolebias_marmoratus
ENSXMAG00000001461	si:ch211-212k18.5	56	69.697	ENSKMAG00000020172	sall2	50	55.102	Kryptolebias_marmoratus
ENSXMAG00000001461	si:ch211-212k18.5	100	68.786	ENSLBEG00000020887	si:ch211-212k18.5	99	68.673	Labrus_bergylta
ENSXMAG00000001461	si:ch211-212k18.5	55	46.105	ENSMAMG00000016229	sall2	59	44.730	Mastacembelus_armatus
ENSXMAG00000001461	si:ch211-212k18.5	70	82.964	ENSMAMG00000015887	si:ch211-212k18.5	99	82.264	Mastacembelus_armatus
ENSXMAG00000001461	si:ch211-212k18.5	73	64.865	ENSMZEG00005012103	sall2	53	46.579	Maylandia_zebra
ENSXMAG00000001461	si:ch211-212k18.5	99	73.235	ENSMZEG00005021214	si:ch211-212k18.5	99	73.383	Maylandia_zebra
ENSXMAG00000001461	si:ch211-212k18.5	95	78.532	ENSMMOG00000012726	si:ch211-212k18.5	99	78.309	Mola_mola
ENSXMAG00000001461	si:ch211-212k18.5	92	72.997	ENSMALG00000000979	si:ch211-212k18.5	97	73.258	Monopterus_albus
ENSXMAG00000001461	si:ch211-212k18.5	97	67.755	ENSNBRG00000023948	si:ch211-212k18.5	96	68.499	Neolamprologus_brichardi
ENSXMAG00000001461	si:ch211-212k18.5	70	45.614	ENSNBRG00000017645	sall2	51	49.565	Neolamprologus_brichardi
ENSXMAG00000001461	si:ch211-212k18.5	55	45.575	ENSORLG00000026871	sall2	59	46.481	Oryzias_latipes
ENSXMAG00000001461	si:ch211-212k18.5	100	68.571	ENSORLG00000030429	si:ch211-212k18.5	99	68.963	Oryzias_latipes
ENSXMAG00000001461	si:ch211-212k18.5	100	68.245	ENSORLG00020008145	si:ch211-212k18.5	99	68.482	Oryzias_latipes_hni
ENSXMAG00000001461	si:ch211-212k18.5	55	45.443	ENSORLG00020007873	sall2	59	46.296	Oryzias_latipes_hni
ENSXMAG00000001461	si:ch211-212k18.5	100	67.837	ENSORLG00015004982	si:ch211-212k18.5	99	68.430	Oryzias_latipes_hsok
ENSXMAG00000001461	si:ch211-212k18.5	55	44.882	ENSORLG00015002422	sall2	59	45.861	Oryzias_latipes_hsok
ENSXMAG00000001461	si:ch211-212k18.5	100	67.522	ENSOMEG00000013949	si:ch211-212k18.5	99	69.827	Oryzias_melastigma
ENSXMAG00000001461	si:ch211-212k18.5	94	65.354	ENSPMGG00000018714	si:ch211-212k18.5	99	65.179	Periophthalmus_magnuspinnatus
ENSXMAG00000001461	si:ch211-212k18.5	100	96.119	ENSPFOG00000023705	si:ch211-212k18.5	100	96.119	Poecilia_formosa
ENSXMAG00000001461	si:ch211-212k18.5	100	96.201	ENSPLAG00000002577	si:ch211-212k18.5	100	96.201	Poecilia_latipinna
ENSXMAG00000001461	si:ch211-212k18.5	99	95.258	ENSPMEG00000016395	si:ch211-212k18.5	99	93.942	Poecilia_mexicana
ENSXMAG00000001461	si:ch211-212k18.5	100	94.467	ENSPREG00000005292	si:ch211-212k18.5	99	94.583	Poecilia_reticulata
ENSXMAG00000001461	si:ch211-212k18.5	99	69.704	ENSPNYG00000021576	si:ch211-212k18.5	99	69.403	Pundamilia_nyererei
ENSXMAG00000001461	si:ch211-212k18.5	96	55.919	ENSPNAG00000006123	si:ch211-212k18.5	95	55.314	Pygocentrus_nattereri
ENSXMAG00000001461	si:ch211-212k18.5	100	70.455	ENSSMAG00000006241	si:ch211-212k18.5	99	70.066	Scophthalmus_maximus
ENSXMAG00000001461	si:ch211-212k18.5	75	53.846	ENSSMAG00000014157	sall2	71	53.846	Scophthalmus_maximus
ENSXMAG00000001461	si:ch211-212k18.5	100	73.948	ENSSDUG00000006164	si:ch211-212k18.5	99	74.041	Seriola_dumerili
ENSXMAG00000001461	si:ch211-212k18.5	100	75.566	ENSSLDG00000003393	si:ch211-212k18.5	99	75.673	Seriola_lalandi_dorsalis
ENSXMAG00000001461	si:ch211-212k18.5	73	64.865	ENSSLDG00000001653	sall2	59	49.231	Seriola_lalandi_dorsalis
ENSXMAG00000001461	si:ch211-212k18.5	94	72.798	ENSSPAG00000013435	si:ch211-212k18.5	97	72.798	Stegastes_partitus
ENSXMAG00000001461	si:ch211-212k18.5	62	46.319	ENSSPAG00000023009	sall2	53	47.082	Stegastes_partitus
ENSXMAG00000001461	si:ch211-212k18.5	94	68.119	ENSTRUG00000025082	si:ch211-212k18.5	98	66.931	Takifugu_rubripes
ENSXMAG00000001461	si:ch211-212k18.5	100	97.684	ENSXCOG00000000762	si:ch211-212k18.5	100	97.684	Xiphophorus_couchianus