EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001467 (Gene tree)
Gene ID: 102218179
Gene Symbol: exd3
Alias: si:ch211-183l21.3
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 47549 bases
Position: chr8:8805688-8853236
Accession: 102218179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000001458	DNA_pol_A_exo1	PF01612.20	8.7e-22	1	1
ENSXMAP00000038640	DNA_pol_A_exo1	PF01612.20	8.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000024394	-	6191	XM_023338715	ENSXMAP00000038640	814 (aa)	XP_023194483	UPI000C6EC7D9
ENSXMAT00000001461	-	6123	XM_014468995	ENSXMAP00000001458	812 (aa)	XP_014324481	M3ZGW6

Gene Model

Click here to download ENSXMAG00000001467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001467	exd3	98	38.605	ENSG00000187609	EXD3	87	38.605	Homo_sapiens
ENSXMAG00000001467	exd3	99	74.754	ENSAPOG00000015520	exd3	82	90.625	Acanthochromis_polyacanthus
ENSXMAG00000001467	exd3	91	71.795	ENSACIG00000005561	exd3	81	71.795	Amphilophus_citrinellus
ENSXMAG00000001467	exd3	99	75.556	ENSAOCG00000007721	exd3	89	75.556	Amphiprion_ocellaris
ENSXMAG00000001467	exd3	99	75.926	ENSAPEG00000007019	exd3	90	75.926	Amphiprion_percula
ENSXMAG00000001467	exd3	98	75.406	ENSATEG00000019941	exd3	90	75.406	Anabas_testudineus
ENSXMAG00000001467	exd3	91	43.925	ENSAPLG00000015358	EXD3	99	43.925	Anas_platyrhynchos
ENSXMAG00000001467	exd3	51	43.427	ENSACAG00000014448	-	93	43.427	Anolis_carolinensis
ENSXMAG00000001467	exd3	95	37.113	ENSANAG00000019674	EXD3	86	36.567	Aotus_nancymaae
ENSXMAG00000001467	exd3	100	72.940	ENSACLG00000021922	exd3	92	73.063	Astatotilapia_calliptera
ENSXMAG00000001467	exd3	96	54.917	ENSAMXG00000019494	exd3	88	54.789	Astyanax_mexicanus
ENSXMAG00000001467	exd3	95	38.363	ENSBTAG00000023788	EXD3	89	38.363	Bos_taurus
ENSXMAG00000001467	exd3	98	37.469	ENSCJAG00000013170	EXD3	87	38.083	Callithrix_jacchus
ENSXMAG00000001467	exd3	99	40.000	ENSCAFG00000019444	EXD3	89	40.000	Canis_familiaris
ENSXMAG00000001467	exd3	96	39.317	ENSCAFG00020003171	EXD3	82	39.317	Canis_lupus_dingo
ENSXMAG00000001467	exd3	98	37.703	ENSCCAG00000027996	EXD3	87	37.703	Cebus_capucinus
ENSXMAG00000001467	exd3	99	38.670	ENSCSAG00000016661	EXD3	87	38.670	Chlorocebus_sabaeus
ENSXMAG00000001467	exd3	88	44.170	ENSCPBG00000011686	EXD3	89	43.512	Chrysemys_picta_bellii
ENSXMAG00000001467	exd3	91	31.012	ENSCING00000002195	-	85	31.012	Ciona_intestinalis
ENSXMAG00000001467	exd3	98	38.625	ENSCANG00000040692	EXD3	88	38.298	Colobus_angolensis_palliatus
ENSXMAG00000001467	exd3	99	69.592	ENSCSEG00000000750	exd3	99	69.592	Cynoglossus_semilaevis
ENSXMAG00000001467	exd3	99	81.706	ENSCVAG00000011560	exd3	90	82.447	Cyprinodon_variegatus
ENSXMAG00000001467	exd3	95	56.057	ENSDARG00000063140	exd3	89	56.057	Danio_rerio
ENSXMAG00000001467	exd3	96	40.051	ENSEASG00005016023	EXD3	88	40.051	Equus_asinus_asinus
ENSXMAG00000001467	exd3	98	38.826	ENSECAG00000017546	EXD3	87	38.826	Equus_caballus
ENSXMAG00000001467	exd3	74	43.689	ENSEEUG00000000405	-	89	40.568	Erinaceus_europaeus
ENSXMAG00000001467	exd3	95	59.638	ENSELUG00000007181	exd3	86	59.638	Esox_lucius
ENSXMAG00000001467	exd3	93	38.312	ENSFCAG00000003579	EXD3	84	38.312	Felis_catus
ENSXMAG00000001467	exd3	87	45.076	ENSFALG00000005132	EXD3	85	45.202	Ficedula_albicollis
ENSXMAG00000001467	exd3	99	70.260	ENSFHEG00000011352	exd3	89	71.040	Fundulus_heteroclitus
ENSXMAG00000001467	exd3	50	41.809	ENSGMOG00000013542	-	88	41.809	Gadus_morhua
ENSXMAG00000001467	exd3	94	43.041	ENSGALG00000052646	EXD3	87	43.444	Gallus_gallus
ENSXMAG00000001467	exd3	99	93.317	ENSGAFG00000007328	exd3	90	93.317	Gambusia_affinis
ENSXMAG00000001467	exd3	91	68.011	ENSGACG00000017442	exd3	100	67.871	Gasterosteus_aculeatus
ENSXMAG00000001467	exd3	92	38.961	ENSGAGG00000011888	EXD3	96	38.961	Gopherus_agassizii
ENSXMAG00000001467	exd3	75	65.179	ENSGGOG00000024724	EXD3	78	65.179	Gorilla_gorilla
ENSXMAG00000001467	exd3	99	73.225	ENSHBUG00000001405	exd3	90	73.350	Haplochromis_burtoni
ENSXMAG00000001467	exd3	96	67.178	ENSHCOG00000020087	exd3	89	67.816	Hippocampus_comes
ENSXMAG00000001467	exd3	95	53.885	ENSIPUG00000020343	exd3	88	54.569	Ictalurus_punctatus
ENSXMAG00000001467	exd3	99	77.998	ENSKMAG00000011881	exd3	90	78.739	Kryptolebias_marmoratus
ENSXMAG00000001467	exd3	99	70.407	ENSLBEG00000004079	exd3	91	70.407	Labrus_bergylta
ENSXMAG00000001467	exd3	96	48.928	ENSLOCG00000002330	exd3	89	49.054	Lepisosteus_oculatus
ENSXMAG00000001467	exd3	92	37.849	ENSLAFG00000001122	EXD3	98	37.849	Loxodonta_africana
ENSXMAG00000001467	exd3	95	39.460	ENSMFAG00000037569	EXD3	84	39.460	Macaca_fascicularis
ENSXMAG00000001467	exd3	91	55.738	ENSMNEG00000033487	EXD3	76	55.738	Macaca_nemestrina
ENSXMAG00000001467	exd3	98	37.406	ENSMLEG00000040548	EXD3	87	37.406	Mandrillus_leucophaeus
ENSXMAG00000001467	exd3	99	72.593	ENSMAMG00000008407	exd3	99	73.159	Mastacembelus_armatus
ENSXMAG00000001467	exd3	99	73.350	ENSMZEG00005017270	exd3	90	73.474	Maylandia_zebra
ENSXMAG00000001467	exd3	88	43.412	ENSMGAG00000001267	EXD3	99	42.781	Meleagris_gallopavo
ENSXMAG00000001467	exd3	91	69.865	ENSMMOG00000021267	exd3	88	69.865	Mola_mola
ENSXMAG00000001467	exd3	51	45.183	ENSMODG00000028091	-	77	45.183	Monodelphis_domestica
ENSXMAG00000001467	exd3	100	71.552	ENSMALG00000018523	exd3	100	71.552	Monopterus_albus
ENSXMAG00000001467	exd3	91	37.483	ENSMPUG00000015130	EXD3	83	37.746	Mustela_putorius_furo
ENSXMAG00000001467	exd3	98	69.483	ENSNBRG00000019734	exd3	88	69.899	Neolamprologus_brichardi
ENSXMAG00000001467	exd3	91	39.523	ENSNLEG00000009095	-	95	39.523	Nomascus_leucogenys
ENSXMAG00000001467	exd3	91	72.530	ENSONIG00000003880	exd3	97	73.108	Oreochromis_niloticus
ENSXMAG00000001467	exd3	92	38.773	ENSOANG00000012485	-	99	38.773	Ornithorhynchus_anatinus
ENSXMAG00000001467	exd3	99	71.696	ENSORLG00000010377	exd3	99	71.696	Oryzias_latipes
ENSXMAG00000001467	exd3	99	71.340	ENSORLG00020012287	exd3	90	71.340	Oryzias_latipes_hni
ENSXMAG00000001467	exd3	99	71.980	ENSORLG00015001156	exd3	98	71.801	Oryzias_latipes_hsok
ENSXMAG00000001467	exd3	99	70.771	ENSOMEG00000023060	exd3	95	68.114	Oryzias_melastigma
ENSXMAG00000001467	exd3	98	38.806	ENSPPAG00000042435	EXD3	87	38.806	Pan_paniscus
ENSXMAG00000001467	exd3	97	37.703	ENSPPRG00000004634	EXD3	87	37.703	Panthera_pardus
ENSXMAG00000001467	exd3	98	37.703	ENSPANG00000026338	EXD3	87	37.703	Papio_anubis
ENSXMAG00000001467	exd3	95	55.311	ENSPKIG00000021103	exd3	87	55.311	Paramormyrops_kingsleyae
ENSXMAG00000001467	exd3	96	41.199	ENSPSIG00000007745	EXD3	91	41.104	Pelodiscus_sinensis
ENSXMAG00000001467	exd3	99	66.335	ENSPMGG00000023999	exd3	90	66.501	Periophthalmus_magnuspinnatus
ENSXMAG00000001467	exd3	73	37.186	ENSPMAG00000006135	-	100	37.186	Petromyzon_marinus
ENSXMAG00000001467	exd3	99	40.936	ENSPCIG00000006180	-	91	40.936	Phascolarctos_cinereus
ENSXMAG00000001467	exd3	100	93.358	ENSPFOG00000019685	exd3	100	93.604	Poecilia_formosa
ENSXMAG00000001467	exd3	100	93.850	ENSPLAG00000022290	exd3	100	94.096	Poecilia_latipinna
ENSXMAG00000001467	exd3	100	93.497	ENSPMEG00000008007	exd3	100	93.742	Poecilia_mexicana
ENSXMAG00000001467	exd3	100	94.335	ENSPREG00000008142	exd3	100	94.581	Poecilia_reticulata
ENSXMAG00000001467	exd3	99	73.225	ENSPNYG00000012849	exd3	90	73.350	Pundamilia_nyererei
ENSXMAG00000001467	exd3	95	55.871	ENSPNAG00000016753	exd3	88	55.871	Pygocentrus_nattereri
ENSXMAG00000001467	exd3	95	39.236	ENSRBIG00000031855	EXD3	87	38.173	Rhinopithecus_bieti
ENSXMAG00000001467	exd3	95	39.642	ENSRROG00000040120	EXD3	85	39.642	Rhinopithecus_roxellana
ENSXMAG00000001467	exd3	98	36.375	ENSSBOG00000022389	EXD3	89	38.083	Saimiri_boliviensis_boliviensis
ENSXMAG00000001467	exd3	91	42.267	ENSSHAG00000001276	-	97	42.063	Sarcophilus_harrisii
ENSXMAG00000001467	exd3	98	52.912	ENSSFOG00015023063	exd3	91	52.912	Scleropages_formosus
ENSXMAG00000001467	exd3	99	73.053	ENSSMAG00000019809	exd3	90	73.053	Scophthalmus_maximus
ENSXMAG00000001467	exd3	100	75.769	ENSSDUG00000006265	exd3	100	76.384	Seriola_dumerili
ENSXMAG00000001467	exd3	91	74.864	ENSSLDG00000004671	exd3	89	75.543	Seriola_lalandi_dorsalis
ENSXMAG00000001467	exd3	99	74.784	ENSSPAG00000017972	exd3	90	74.784	Stegastes_partitus
ENSXMAG00000001467	exd3	92	38.114	ENSSSCG00000005855	EXD3	87	38.247	Sus_scrofa
ENSXMAG00000001467	exd3	91	44.980	ENSTGUG00000002494	EXD3	99	44.980	Taeniopygia_guttata
ENSXMAG00000001467	exd3	99	66.255	ENSTRUG00000010236	exd3	88	66.255	Takifugu_rubripes
ENSXMAG00000001467	exd3	91	63.661	ENSTNIG00000013212	exd3	93	63.661	Tetraodon_nigroviridis
ENSXMAG00000001467	exd3	55	46.599	ENSTTRG00000003815	-	56	46.154	Tursiops_truncatus
ENSXMAG00000001467	exd3	93	39.586	ENSUAMG00000021470	EXD3	90	39.586	Ursus_americanus
ENSXMAG00000001467	exd3	96	39.798	ENSVVUG00000029403	EXD3	83	39.798	Vulpes_vulpes