EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001480 (Gene tree)
Gene ID: 102219513
Gene Symbol: -
Alias: rab39b|zgc:153068
Full Name: RAB39B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4151 bases
Position: chr14:6825063-6829213
Accession: 102219513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000001469	MMR_HSR1	PF01926.23	4.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000001472	-	721	XM_005809175	ENSXMAP00000001469	213 (aa)	XP_005809232	M3ZGX7

Gene Model

Click here to download ENSXMAG00000001480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001480's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001480	-	100	89.671	ENSG00000155961	RAB39B	100	89.671	Homo_sapiens
ENSXMAG00000001480	-	100	91.080	ENSAPOG00000005301	RAB39B	100	91.080	Acanthochromis_polyacanthus
ENSXMAG00000001480	-	100	99.061	ENSAPOG00000014970	-	100	99.061	Acanthochromis_polyacanthus
ENSXMAG00000001480	-	100	90.141	ENSAMEG00000009075	RAB39B	100	90.141	Ailuropoda_melanoleuca
ENSXMAG00000001480	-	100	98.592	ENSACIG00000023837	-	100	98.592	Amphilophus_citrinellus
ENSXMAG00000001480	-	100	90.610	ENSACIG00000000154	RAB39B	100	90.610	Amphilophus_citrinellus
ENSXMAG00000001480	-	100	99.061	ENSAOCG00000007928	RAB39B	100	99.061	Amphiprion_ocellaris
ENSXMAG00000001480	-	100	99.061	ENSAPEG00000016172	-	100	99.061	Amphiprion_percula
ENSXMAG00000001480	-	100	91.080	ENSAPEG00000017138	RAB39B	100	91.080	Amphiprion_percula
ENSXMAG00000001480	-	100	92.019	ENSATEG00000009865	RAB39B	100	92.019	Anabas_testudineus
ENSXMAG00000001480	-	100	99.061	ENSATEG00000013086	-	100	99.061	Anabas_testudineus
ENSXMAG00000001480	-	99	88.679	ENSAPLG00000014543	RAB39B	100	88.679	Anas_platyrhynchos
ENSXMAG00000001480	-	99	89.573	ENSANAG00000031228	RAB39B	100	87.324	Aotus_nancymaae
ENSXMAG00000001480	-	100	99.061	ENSACLG00000022893	-	100	99.061	Astatotilapia_calliptera
ENSXMAG00000001480	-	100	99.061	ENSACLG00000027590	-	100	99.061	Astatotilapia_calliptera
ENSXMAG00000001480	-	100	90.610	ENSACLG00000009468	RAB39B	100	90.610	Astatotilapia_calliptera
ENSXMAG00000001480	-	100	93.897	ENSAMXG00000003717	rab39bb	100	93.897	Astyanax_mexicanus
ENSXMAG00000001480	-	100	94.836	ENSAMXG00000041657	rab39ba	100	94.836	Astyanax_mexicanus
ENSXMAG00000001480	-	100	90.141	ENSBTAG00000019779	RAB39B	100	90.141	Bos_taurus
ENSXMAG00000001480	-	100	89.671	ENSCJAG00000047802	RAB39B	100	89.671	Callithrix_jacchus
ENSXMAG00000001480	-	99	89.524	ENSCAFG00000019640	RAB39B	99	89.524	Canis_familiaris
ENSXMAG00000001480	-	100	90.141	ENSCAFG00020008673	RAB39B	100	90.141	Canis_lupus_dingo
ENSXMAG00000001480	-	100	90.141	ENSCHIG00000000158	RAB39B	100	90.141	Capra_hircus
ENSXMAG00000001480	-	100	89.671	ENSTSYG00000030186	RAB39B	100	89.671	Carlito_syrichta
ENSXMAG00000001480	-	100	89.671	ENSCPOG00000039524	RAB39B	100	89.671	Cavia_porcellus
ENSXMAG00000001480	-	100	89.671	ENSCCAG00000030469	RAB39B	100	89.671	Cebus_capucinus
ENSXMAG00000001480	-	100	89.671	ENSCATG00000034919	RAB39B	100	89.671	Cercocebus_atys
ENSXMAG00000001480	-	100	89.671	ENSCLAG00000000113	RAB39B	100	89.671	Chinchilla_lanigera
ENSXMAG00000001480	-	100	89.671	ENSCSAG00000006507	RAB39B	100	89.671	Chlorocebus_sabaeus
ENSXMAG00000001480	-	100	89.671	ENSCPBG00000001057	RAB39B	100	89.671	Chrysemys_picta_bellii
ENSXMAG00000001480	-	100	89.671	ENSCANG00000034492	RAB39B	100	89.671	Colobus_angolensis_palliatus
ENSXMAG00000001480	-	100	89.202	ENSCGRG00001022502	Rab39b	100	89.202	Cricetulus_griseus_chok1gshd
ENSXMAG00000001480	-	100	89.202	ENSCGRG00000013798	Rab39b	100	89.202	Cricetulus_griseus_crigri
ENSXMAG00000001480	-	100	99.531	ENSCSEG00000017861	-	100	99.531	Cynoglossus_semilaevis
ENSXMAG00000001480	-	100	92.019	ENSCSEG00000019722	RAB39B	100	92.019	Cynoglossus_semilaevis
ENSXMAG00000001480	-	100	92.019	ENSCVAG00000014915	RAB39B	100	92.019	Cyprinodon_variegatus
ENSXMAG00000001480	-	100	99.531	ENSCVAG00000015862	-	100	99.531	Cyprinodon_variegatus
ENSXMAG00000001480	-	100	92.958	ENSDARG00000036501	rab39bb	100	92.958	Danio_rerio
ENSXMAG00000001480	-	100	94.366	ENSDARG00000019312	rab39ba	100	94.366	Danio_rerio
ENSXMAG00000001480	-	70	91.333	ENSDNOG00000033622	RAB39B	67	91.333	Dasypus_novemcinctus
ENSXMAG00000001480	-	100	89.202	ENSDORG00000029496	Rab39b	100	89.202	Dipodomys_ordii
ENSXMAG00000001480	-	100	89.671	ENSETEG00000009624	RAB39B	100	89.671	Echinops_telfairi
ENSXMAG00000001480	-	100	90.141	ENSEASG00005016822	RAB39B	100	90.141	Equus_asinus_asinus
ENSXMAG00000001480	-	100	90.141	ENSECAG00000007380	RAB39B	100	90.141	Equus_caballus
ENSXMAG00000001480	-	100	97.183	ENSELUG00000013957	-	100	97.183	Esox_lucius
ENSXMAG00000001480	-	100	94.836	ENSELUG00000005304	rab39ba	100	94.836	Esox_lucius
ENSXMAG00000001480	-	100	90.141	ENSFCAG00000038920	RAB39B	100	90.141	Felis_catus
ENSXMAG00000001480	-	100	89.671	ENSFALG00000000201	RAB39B	100	89.671	Ficedula_albicollis
ENSXMAG00000001480	-	100	89.671	ENSFDAG00000014725	RAB39B	100	89.671	Fukomys_damarensis
ENSXMAG00000001480	-	100	100.000	ENSFHEG00000002885	-	100	100.000	Fundulus_heteroclitus
ENSXMAG00000001480	-	100	91.549	ENSFHEG00000020877	RAB39B	100	91.549	Fundulus_heteroclitus
ENSXMAG00000001480	-	100	91.549	ENSGMOG00000010808	RAB39B	100	91.549	Gadus_morhua
ENSXMAG00000001480	-	100	98.598	ENSGMOG00000008450	-	99	98.598	Gadus_morhua
ENSXMAG00000001480	-	100	89.202	ENSGALG00000040784	RAB39B	98	91.724	Gallus_gallus
ENSXMAG00000001480	-	100	100.000	ENSGAFG00000006932	-	100	100.000	Gambusia_affinis
ENSXMAG00000001480	-	100	92.488	ENSGAFG00000004604	RAB39B	100	92.488	Gambusia_affinis
ENSXMAG00000001480	-	100	88.732	ENSGACG00000020437	-	100	88.732	Gasterosteus_aculeatus
ENSXMAG00000001480	-	100	98.131	ENSGACG00000001950	RAB39B	99	98.131	Gasterosteus_aculeatus
ENSXMAG00000001480	-	100	89.671	ENSGAGG00000008447	RAB39B	100	89.671	Gopherus_agassizii
ENSXMAG00000001480	-	100	89.671	ENSGGOG00000005567	RAB39B	100	89.671	Gorilla_gorilla
ENSXMAG00000001480	-	100	99.061	ENSHBUG00000013570	-	100	99.061	Haplochromis_burtoni
ENSXMAG00000001480	-	100	90.610	ENSHBUG00000003539	RAB39B	100	90.610	Haplochromis_burtoni
ENSXMAG00000001480	-	100	89.671	ENSHGLG00000000990	RAB39B	100	89.671	Heterocephalus_glaber_female
ENSXMAG00000001480	-	100	89.671	ENSHGLG00100000180	RAB39B	100	89.671	Heterocephalus_glaber_male
ENSXMAG00000001480	-	100	87.324	ENSHCOG00000003981	RAB39B	100	87.324	Hippocampus_comes
ENSXMAG00000001480	-	100	94.836	ENSHCOG00000019732	-	100	94.836	Hippocampus_comes
ENSXMAG00000001480	-	100	90.141	ENSIPUG00000020833	rab39b	100	90.141	Ictalurus_punctatus
ENSXMAG00000001480	-	100	94.366	ENSIPUG00000024203	rab39ba	100	94.366	Ictalurus_punctatus
ENSXMAG00000001480	-	100	89.671	ENSSTOG00000011237	RAB39B	100	89.671	Ictidomys_tridecemlineatus
ENSXMAG00000001480	-	100	89.671	ENSJJAG00000016977	Rab39b	100	89.671	Jaculus_jaculus
ENSXMAG00000001480	-	100	92.019	ENSKMAG00000008625	RAB39B	100	92.019	Kryptolebias_marmoratus
ENSXMAG00000001480	-	100	98.592	ENSLBEG00000022630	-	100	98.592	Labrus_bergylta
ENSXMAG00000001480	-	100	90.141	ENSLBEG00000001313	RAB39B	100	90.141	Labrus_bergylta
ENSXMAG00000001480	-	100	77.934	ENSLACG00000002332	-	100	77.934	Latimeria_chalumnae
ENSXMAG00000001480	-	100	91.080	ENSLACG00000016074	RAB39B	100	91.080	Latimeria_chalumnae
ENSXMAG00000001480	-	100	76.056	ENSLOCG00000006748	-	100	76.056	Lepisosteus_oculatus
ENSXMAG00000001480	-	100	94.366	ENSLOCG00000014927	rab39bb	98	94.366	Lepisosteus_oculatus
ENSXMAG00000001480	-	100	89.671	ENSLAFG00000030959	RAB39B	100	89.671	Loxodonta_africana
ENSXMAG00000001480	-	100	89.671	ENSMFAG00000036188	RAB39B	100	89.671	Macaca_fascicularis
ENSXMAG00000001480	-	100	89.671	ENSMMUG00000015096	RAB39B	100	89.671	Macaca_mulatta
ENSXMAG00000001480	-	100	89.671	ENSMNEG00000030607	RAB39B	100	89.671	Macaca_nemestrina
ENSXMAG00000001480	-	100	89.671	ENSMLEG00000029019	RAB39B	100	89.671	Mandrillus_leucophaeus
ENSXMAG00000001480	-	100	99.061	ENSMAMG00000011131	-	100	99.061	Mastacembelus_armatus
ENSXMAG00000001480	-	100	90.610	ENSMAMG00000021329	RAB39B	100	90.610	Mastacembelus_armatus
ENSXMAG00000001480	-	100	90.610	ENSMZEG00005002185	RAB39B	100	90.610	Maylandia_zebra
ENSXMAG00000001480	-	100	99.061	ENSMZEG00005021222	-	100	99.061	Maylandia_zebra
ENSXMAG00000001480	-	100	89.202	ENSMAUG00000011701	Rab39b	100	89.202	Mesocricetus_auratus
ENSXMAG00000001480	-	100	89.671	ENSMICG00000044410	RAB39B	100	89.671	Microcebus_murinus
ENSXMAG00000001480	-	100	89.671	ENSMOCG00000006994	Rab39b	100	89.671	Microtus_ochrogaster
ENSXMAG00000001480	-	100	84.651	ENSMMOG00000014491	RAB39B	100	84.651	Mola_mola
ENSXMAG00000001480	-	100	90.610	ENSMMOG00000014549	-	100	90.610	Mola_mola
ENSXMAG00000001480	-	68	90.278	ENSMODG00000016498	-	90	90.278	Monodelphis_domestica
ENSXMAG00000001480	-	100	99.061	ENSMALG00000012723	RAB39B	100	99.061	Monopterus_albus
ENSXMAG00000001480	-	100	90.141	ENSMALG00000018973	RAB39B	100	90.141	Monopterus_albus
ENSXMAG00000001480	-	100	89.671	ENSMUSG00000031202	Rab39b	100	89.671	Mus_musculus
ENSXMAG00000001480	-	100	89.671	MGP_SPRETEiJ_G0034360	Rab39b	100	89.671	Mus_spretus
ENSXMAG00000001480	-	100	90.141	ENSMPUG00000016129	RAB39B	100	90.141	Mustela_putorius_furo
ENSXMAG00000001480	-	100	89.202	ENSMLUG00000007660	RAB39B	100	89.202	Myotis_lucifugus
ENSXMAG00000001480	-	100	89.671	ENSNGAG00000000596	Rab39b	100	89.671	Nannospalax_galili
ENSXMAG00000001480	-	100	99.061	ENSNBRG00000018106	-	100	99.061	Neolamprologus_brichardi
ENSXMAG00000001480	-	100	91.080	ENSNBRG00000005082	RAB39B	100	91.080	Neolamprologus_brichardi
ENSXMAG00000001480	-	100	89.671	ENSNLEG00000014505	RAB39B	100	89.671	Nomascus_leucogenys
ENSXMAG00000001480	-	100	89.671	ENSODEG00000000520	RAB39B	100	89.671	Octodon_degus
ENSXMAG00000001480	-	100	99.061	ENSONIG00000006997	-	100	99.061	Oreochromis_niloticus
ENSXMAG00000001480	-	100	91.080	ENSONIG00000008545	RAB39B	100	91.080	Oreochromis_niloticus
ENSXMAG00000001480	-	100	89.671	ENSOCUG00000004254	RAB39B	100	89.671	Oryctolagus_cuniculus
ENSXMAG00000001480	-	100	96.244	ENSORLG00000008345	-	100	96.244	Oryzias_latipes
ENSXMAG00000001480	-	100	91.549	ENSORLG00000001850	RAB39B	100	91.549	Oryzias_latipes
ENSXMAG00000001480	-	100	91.549	ENSORLG00020019269	RAB39B	100	91.549	Oryzias_latipes_hni
ENSXMAG00000001480	-	100	91.080	ENSORLG00015003202	RAB39B	100	91.080	Oryzias_latipes_hsok
ENSXMAG00000001480	-	100	96.714	ENSORLG00015022289	-	100	96.714	Oryzias_latipes_hsok
ENSXMAG00000001480	-	100	99.061	ENSOMEG00000017881	-	100	99.061	Oryzias_melastigma
ENSXMAG00000001480	-	100	92.019	ENSOMEG00000006333	RAB39B	100	92.019	Oryzias_melastigma
ENSXMAG00000001480	-	100	89.671	ENSOGAG00000025424	RAB39B	100	89.671	Otolemur_garnettii
ENSXMAG00000001480	-	100	90.141	ENSOARG00000003682	RAB39B	83	90.141	Ovis_aries
ENSXMAG00000001480	-	100	89.671	ENSPPAG00000041186	RAB39B	100	89.671	Pan_paniscus
ENSXMAG00000001480	-	100	89.202	ENSPPRG00000017193	RAB39B	100	89.202	Panthera_pardus
ENSXMAG00000001480	-	95	89.604	ENSPTIG00000006927	RAB39B	100	89.604	Panthera_tigris_altaica
ENSXMAG00000001480	-	100	89.671	ENSPTRG00000042083	RAB39B	100	89.671	Pan_troglodytes
ENSXMAG00000001480	-	100	89.671	ENSPTRG00000048400	-	100	89.671	Pan_troglodytes
ENSXMAG00000001480	-	100	89.671	ENSPANG00000008960	RAB39B	100	89.671	Papio_anubis
ENSXMAG00000001480	-	100	95.305	ENSPKIG00000020795	rab39bb	100	95.305	Paramormyrops_kingsleyae
ENSXMAG00000001480	-	100	77.465	ENSPKIG00000025667	-	100	77.465	Paramormyrops_kingsleyae
ENSXMAG00000001480	-	100	89.202	ENSPSIG00000009419	RAB39B	100	89.202	Pelodiscus_sinensis
ENSXMAG00000001480	-	100	99.061	ENSPMGG00000023081	rab39bb	100	99.061	Periophthalmus_magnuspinnatus
ENSXMAG00000001480	-	100	89.671	ENSPCIG00000029333	RAB39B	100	89.671	Phascolarctos_cinereus
ENSXMAG00000001480	-	100	100.000	ENSPFOG00000004684	-	100	100.000	Poecilia_formosa
ENSXMAG00000001480	-	100	92.488	ENSPFOG00000004492	RAB39B	100	92.488	Poecilia_formosa
ENSXMAG00000001480	-	100	100.000	ENSPLAG00000018322	-	100	100.000	Poecilia_latipinna
ENSXMAG00000001480	-	100	92.488	ENSPLAG00000007237	RAB39B	100	92.488	Poecilia_latipinna
ENSXMAG00000001480	-	100	100.000	ENSPMEG00000007976	-	100	100.000	Poecilia_mexicana
ENSXMAG00000001480	-	100	92.488	ENSPMEG00000004946	RAB39B	100	92.488	Poecilia_mexicana
ENSXMAG00000001480	-	100	100.000	ENSPREG00000009597	-	100	100.000	Poecilia_reticulata
ENSXMAG00000001480	-	100	92.488	ENSPREG00000007129	RAB39B	100	92.488	Poecilia_reticulata
ENSXMAG00000001480	-	100	89.671	ENSPPYG00000020901	RAB39B	100	89.671	Pongo_abelii
ENSXMAG00000001480	-	100	89.671	ENSPCOG00000013225	RAB39B	100	89.671	Propithecus_coquereli
ENSXMAG00000001480	-	100	90.141	ENSPVAG00000016854	RAB39B	100	90.141	Pteropus_vampyrus
ENSXMAG00000001480	-	100	90.610	ENSPNYG00000015774	RAB39B	100	90.610	Pundamilia_nyererei
ENSXMAG00000001480	-	100	99.061	ENSPNYG00000019276	-	100	99.061	Pundamilia_nyererei
ENSXMAG00000001480	-	100	92.958	ENSPNAG00000013589	rab39bb	100	92.958	Pygocentrus_nattereri
ENSXMAG00000001480	-	100	94.836	ENSPNAG00000013897	rab39ba	100	94.836	Pygocentrus_nattereri
ENSXMAG00000001480	-	100	89.671	ENSRBIG00000031945	RAB39B	100	89.671	Rhinopithecus_bieti
ENSXMAG00000001480	-	100	89.671	ENSRROG00000000340	RAB39B	100	89.671	Rhinopithecus_roxellana
ENSXMAG00000001480	-	100	89.671	ENSSBOG00000025110	RAB39B	100	89.671	Saimiri_boliviensis_boliviensis
ENSXMAG00000001480	-	100	75.117	ENSSFOG00015009244	rab39bb	100	75.117	Scleropages_formosus
ENSXMAG00000001480	-	100	90.610	ENSSFOG00015018421	rab39b	100	90.610	Scleropages_formosus
ENSXMAG00000001480	-	100	76.056	ENSSFOG00015003628	-	100	76.056	Scleropages_formosus
ENSXMAG00000001480	-	100	91.080	ENSSMAG00000001953	rab39bb	100	91.080	Scophthalmus_maximus
ENSXMAG00000001480	-	100	98.592	ENSSDUG00000014091	-	100	98.592	Seriola_dumerili
ENSXMAG00000001480	-	100	92.019	ENSSLDG00000006360	RAB39B	100	92.019	Seriola_lalandi_dorsalis
ENSXMAG00000001480	-	100	98.592	ENSSLDG00000009068	-	100	98.592	Seriola_lalandi_dorsalis
ENSXMAG00000001480	-	100	89.671	ENSSPUG00000000552	RAB39B	100	89.671	Sphenodon_punctatus
ENSXMAG00000001480	-	100	99.061	ENSSPAG00000010919	-	100	99.061	Stegastes_partitus
ENSXMAG00000001480	-	100	92.019	ENSSPAG00000010771	RAB39B	100	92.019	Stegastes_partitus
ENSXMAG00000001480	-	100	90.141	ENSSSCG00000024233	RAB39B	100	90.141	Sus_scrofa
ENSXMAG00000001480	-	100	98.122	ENSTRUG00000025018	rab39bb	100	98.122	Takifugu_rubripes
ENSXMAG00000001480	-	100	98.140	ENSTNIG00000003679	-	100	98.140	Tetraodon_nigroviridis
ENSXMAG00000001480	-	100	89.671	ENSTBEG00000008074	RAB39B	100	89.671	Tupaia_belangeri
ENSXMAG00000001480	-	100	90.141	ENSUAMG00000023026	RAB39B	100	90.141	Ursus_americanus
ENSXMAG00000001480	-	100	90.141	ENSUMAG00000017386	RAB39B	100	90.141	Ursus_maritimus
ENSXMAG00000001480	-	100	90.141	ENSVVUG00000012142	RAB39B	100	90.141	Vulpes_vulpes
ENSXMAG00000001480	-	100	90.610	ENSXETG00000032443	RAB39B	100	90.610	Xenopus_tropicalis
ENSXMAG00000001480	-	100	100.000	ENSXCOG00000006807	rab39bb	100	100.000	Xiphophorus_couchianus
ENSXMAG00000001480	-	100	92.488	ENSXMAG00000000325	RAB39B	100	92.488	Xiphophorus_maculatus