EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001516 (Gene tree)
Gene ID: 102225004
Gene Symbol: rad18
Alias: zgc:55577
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 28925 bases
Position: chr20:19275399-19304323
Accession: 102225004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000038638	SAP	PF02037.27	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000025201	-	1098	-	ENSXMAP00000038638	365 (aa)	-	-
ENSXMAT00000001514	-	1570	-	ENSXMAP00000001511	482 (aa)	-	M3ZH19
ENSXMAT00000042462	-	1615	XM_005799886	ENSXMAP00000023351	497 (aa)	XP_005799943	UPI0003B462E8

Gene Model

Click here to download ENSXMAG00000001516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001516	rad18	94	40.162	ENSG00000070950	RAD18	95	43.023	Homo_sapiens
ENSXMAG00000001516	rad18	95	64.130	ENSAPOG00000005260	rad18	75	64.130	Acanthochromis_polyacanthus
ENSXMAG00000001516	rad18	95	38.544	ENSAMEG00000012375	RAD18	61	38.544	Ailuropoda_melanoleuca
ENSXMAG00000001516	rad18	95	62.040	ENSACIG00000020655	rad18	89	61.732	Amphilophus_citrinellus
ENSXMAG00000001516	rad18	95	65.135	ENSAOCG00000004507	rad18	77	65.135	Amphiprion_ocellaris
ENSXMAG00000001516	rad18	95	65.405	ENSAPEG00000016837	rad18	83	65.405	Amphiprion_percula
ENSXMAG00000001516	rad18	88	37.430	ENSAPLG00000003138	RAD18	68	37.430	Anas_platyrhynchos
ENSXMAG00000001516	rad18	95	39.733	ENSANAG00000033360	RAD18	69	39.733	Aotus_nancymaae
ENSXMAG00000001516	rad18	95	65.312	ENSACLG00000023506	rad18	80	65.312	Astatotilapia_calliptera
ENSXMAG00000001516	rad18	95	49.189	ENSAMXG00000002534	rad18	82	48.324	Astyanax_mexicanus
ENSXMAG00000001516	rad18	94	40.811	ENSBTAG00000012142	RAD18	74	41.351	Bos_taurus
ENSXMAG00000001516	rad18	95	39.467	ENSCJAG00000040303	RAD18	73	39.467	Callithrix_jacchus
ENSXMAG00000001516	rad18	95	39.467	ENSCAFG00000005548	RAD18	68	39.467	Canis_familiaris
ENSXMAG00000001516	rad18	95	39.467	ENSCAFG00020009228	RAD18	68	39.467	Canis_lupus_dingo
ENSXMAG00000001516	rad18	95	38.667	ENSCHIG00000007965	RAD18	93	39.423	Capra_hircus
ENSXMAG00000001516	rad18	90	40.793	ENSTSYG00000012189	RAD18	66	40.793	Carlito_syrichta
ENSXMAG00000001516	rad18	89	37.714	ENSCAPG00000000356	RAD18	75	37.714	Cavia_aperea
ENSXMAG00000001516	rad18	94	38.753	ENSCPOG00000013890	RAD18	68	38.798	Cavia_porcellus
ENSXMAG00000001516	rad18	95	39.200	ENSCCAG00000022920	RAD18	69	39.200	Cebus_capucinus
ENSXMAG00000001516	rad18	96	40.420	ENSCATG00000039277	RAD18	72	39.895	Cercocebus_atys
ENSXMAG00000001516	rad18	94	38.692	ENSCLAG00000003652	RAD18	68	39.510	Chinchilla_lanigera
ENSXMAG00000001516	rad18	96	41.270	ENSCSAG00000010783	RAD18	69	41.270	Chlorocebus_sabaeus
ENSXMAG00000001516	rad18	93	38.482	ENSCPBG00000014787	RAD18	72	38.482	Chrysemys_picta_bellii
ENSXMAG00000001516	rad18	94	41.576	ENSCANG00000007308	RAD18	69	41.287	Colobus_angolensis_palliatus
ENSXMAG00000001516	rad18	91	38.056	ENSCGRG00001010209	-	66	38.056	Cricetulus_griseus_chok1gshd
ENSXMAG00000001516	rad18	94	38.649	ENSCGRG00001018154	-	75	38.587	Cricetulus_griseus_chok1gshd
ENSXMAG00000001516	rad18	91	38.056	ENSCGRG00000019636	-	66	38.056	Cricetulus_griseus_crigri
ENSXMAG00000001516	rad18	94	38.649	ENSCGRG00000007283	-	75	38.587	Cricetulus_griseus_crigri
ENSXMAG00000001516	rad18	95	60.326	ENSCSEG00000002516	rad18	71	60.326	Cynoglossus_semilaevis
ENSXMAG00000001516	rad18	95	47.956	ENSDARG00000027938	rad18	79	47.956	Danio_rerio
ENSXMAG00000001516	rad18	93	40.984	ENSDNOG00000040055	RAD18	67	40.984	Dasypus_novemcinctus
ENSXMAG00000001516	rad18	94	38.978	ENSDORG00000001099	Rad18	75	39.037	Dipodomys_ordii
ENSXMAG00000001516	rad18	82	40.391	ENSETEG00000002268	RAD18	63	40.391	Echinops_telfairi
ENSXMAG00000001516	rad18	94	42.663	ENSEASG00005013316	RAD18	64	42.663	Equus_asinus_asinus
ENSXMAG00000001516	rad18	94	42.663	ENSECAG00000010746	RAD18	66	42.663	Equus_caballus
ENSXMAG00000001516	rad18	95	51.862	ENSELUG00000000733	rad18	76	51.862	Esox_lucius
ENSXMAG00000001516	rad18	95	39.678	ENSFCAG00000025747	RAD18	69	39.678	Felis_catus
ENSXMAG00000001516	rad18	92	39.665	ENSFALG00000013625	RAD18	75	39.665	Ficedula_albicollis
ENSXMAG00000001516	rad18	94	40.489	ENSFDAG00000009907	RAD18	68	40.489	Fukomys_damarensis
ENSXMAG00000001516	rad18	61	55.245	ENSGALG00000008368	RAD18	71	37.701	Gallus_gallus
ENSXMAG00000001516	rad18	95	62.398	ENSGACG00000000920	rad18	77	62.398	Gasterosteus_aculeatus
ENSXMAG00000001516	rad18	88	37.313	ENSGAGG00000005184	RAD18	65	37.313	Gopherus_agassizii
ENSXMAG00000001516	rad18	94	40.270	ENSGGOG00000008391	RAD18	68	40.327	Gorilla_gorilla
ENSXMAG00000001516	rad18	92	62.170	ENSHBUG00000013322	rad18	83	55.278	Haplochromis_burtoni
ENSXMAG00000001516	rad18	81	37.500	ENSHGLG00000009196	-	94	37.500	Heterocephalus_glaber_female
ENSXMAG00000001516	rad18	81	37.500	ENSHGLG00100017675	-	94	37.500	Heterocephalus_glaber_male
ENSXMAG00000001516	rad18	95	48.925	ENSIPUG00000018681	rad18	80	47.532	Ictalurus_punctatus
ENSXMAG00000001516	rad18	81	38.125	ENSSTOG00000004870	-	94	38.750	Ictidomys_tridecemlineatus
ENSXMAG00000001516	rad18	93	42.120	ENSJJAG00000001484	Rad18	75	42.120	Jaculus_jaculus
ENSXMAG00000001516	rad18	95	70.845	ENSKMAG00000020725	rad18	73	70.845	Kryptolebias_marmoratus
ENSXMAG00000001516	rad18	81	36.607	ENSLACG00000018437	RAD18	97	36.607	Latimeria_chalumnae
ENSXMAG00000001516	rad18	94	46.092	ENSLOCG00000010629	rad18	78	45.968	Lepisosteus_oculatus
ENSXMAG00000001516	rad18	91	40.385	ENSLAFG00000004667	RAD18	68	40.385	Loxodonta_africana
ENSXMAG00000001516	rad18	96	40.157	ENSMFAG00000028864	RAD18	70	40.157	Macaca_fascicularis
ENSXMAG00000001516	rad18	96	41.005	ENSMMUG00000020013	RAD18	94	40.312	Macaca_mulatta
ENSXMAG00000001516	rad18	96	41.005	ENSMNEG00000013464	RAD18	70	40.157	Macaca_nemestrina
ENSXMAG00000001516	rad18	96	40.420	ENSMLEG00000014306	RAD18	70	39.895	Mandrillus_leucophaeus
ENSXMAG00000001516	rad18	85	63.265	ENSMAMG00000023936	rad18	73	63.265	Mastacembelus_armatus
ENSXMAG00000001516	rad18	95	65.041	ENSMZEG00005010577	rad18	69	65.041	Maylandia_zebra
ENSXMAG00000001516	rad18	88	36.517	ENSMGAG00000010131	RAD18	68	36.517	Meleagris_gallopavo
ENSXMAG00000001516	rad18	95	38.978	ENSMAUG00000020642	Rad18	77	38.727	Mesocricetus_auratus
ENSXMAG00000001516	rad18	93	40.000	ENSMICG00000013536	RAD18	68	38.904	Microcebus_murinus
ENSXMAG00000001516	rad18	94	41.033	ENSMOCG00000009114	Rad18	75	40.984	Microtus_ochrogaster
ENSXMAG00000001516	rad18	97	61.376	ENSMMOG00000021793	rad18	99	61.376	Mola_mola
ENSXMAG00000001516	rad18	95	39.221	ENSMODG00000004679	RAD18	68	40.470	Monodelphis_domestica
ENSXMAG00000001516	rad18	94	40.327	MGP_CAROLIEiJ_G0028712	Rad18	96	38.344	Mus_caroli
ENSXMAG00000001516	rad18	94	39.410	ENSMUSG00000030254	Rad18	96	37.349	Mus_musculus
ENSXMAG00000001516	rad18	94	40.909	MGP_PahariEiJ_G0022463	Rad18	96	38.554	Mus_pahari
ENSXMAG00000001516	rad18	94	40.217	MGP_SPRETEiJ_G0029740	Rad18	96	38.226	Mus_spretus
ENSXMAG00000001516	rad18	95	40.751	ENSMPUG00000017063	RAD18	69	41.287	Mustela_putorius_furo
ENSXMAG00000001516	rad18	95	38.235	ENSMLUG00000016494	RAD18	68	40.374	Myotis_lucifugus
ENSXMAG00000001516	rad18	93	40.000	ENSNGAG00000012464	Rad18	78	40.000	Nannospalax_galili
ENSXMAG00000001516	rad18	96	61.878	ENSNBRG00000004794	rad18	98	61.878	Neolamprologus_brichardi
ENSXMAG00000001516	rad18	93	40.217	ENSNLEG00000003789	RAD18	68	40.217	Nomascus_leucogenys
ENSXMAG00000001516	rad18	76	37.586	ENSMEUG00000003444	-	61	37.586	Notamacropus_eugenii
ENSXMAG00000001516	rad18	92	40.327	ENSOPRG00000013856	RAD18	68	41.417	Ochotona_princeps
ENSXMAG00000001516	rad18	81	39.385	ENSODEG00000018158	RAD18	95	39.877	Octodon_degus
ENSXMAG00000001516	rad18	95	62.873	ENSONIG00000018979	rad18	79	62.873	Oreochromis_niloticus
ENSXMAG00000001516	rad18	94	40.811	ENSOCUG00000000013	RAD18	68	41.351	Oryctolagus_cuniculus
ENSXMAG00000001516	rad18	98	59.669	ENSORLG00000029026	rad18	98	59.669	Oryzias_latipes
ENSXMAG00000001516	rad18	95	39.153	ENSOGAG00000001410	RAD18	70	39.153	Otolemur_garnettii
ENSXMAG00000001516	rad18	95	38.400	ENSOARG00000007445	RAD18	69	40.000	Ovis_aries
ENSXMAG00000001516	rad18	94	40.162	ENSPPAG00000035797	RAD18	68	40.217	Pan_paniscus
ENSXMAG00000001516	rad18	95	39.946	ENSPPRG00000004021	RAD18	69	39.946	Panthera_pardus
ENSXMAG00000001516	rad18	95	39.946	ENSPTIG00000008602	RAD18	69	39.946	Panthera_tigris_altaica
ENSXMAG00000001516	rad18	93	40.054	ENSPTRG00000014583	RAD18	68	40.054	Pan_troglodytes
ENSXMAG00000001516	rad18	96	40.420	ENSPANG00000008855	RAD18	70	39.895	Papio_anubis
ENSXMAG00000001516	rad18	93	39.286	ENSPSIG00000006928	RAD18	69	39.286	Pelodiscus_sinensis
ENSXMAG00000001516	rad18	90	58.960	ENSPMGG00000013294	rad18	94	58.960	Periophthalmus_magnuspinnatus
ENSXMAG00000001516	rad18	94	40.431	ENSPEMG00000022129	Rad18	75	40.379	Peromyscus_maniculatus_bairdii
ENSXMAG00000001516	rad18	95	41.253	ENSPCIG00000024872	RAD18	75	41.253	Phascolarctos_cinereus
ENSXMAG00000001516	rad18	96	88.108	ENSPFOG00000002722	rad18	98	88.108	Poecilia_formosa
ENSXMAG00000001516	rad18	93	40.822	ENSPPYG00000013688	RAD18	68	40.822	Pongo_abelii
ENSXMAG00000001516	rad18	58	45.192	ENSPCAG00000008229	RAD18	52	45.192	Procavia_capensis
ENSXMAG00000001516	rad18	95	38.992	ENSPVAG00000012220	RAD18	70	40.533	Pteropus_vampyrus
ENSXMAG00000001516	rad18	95	65.312	ENSPNYG00000006815	rad18	74	65.312	Pundamilia_nyererei
ENSXMAG00000001516	rad18	94	48.677	ENSPNAG00000016082	rad18	79	48.677	Pygocentrus_nattereri
ENSXMAG00000001516	rad18	95	39.314	ENSRNOG00000005907	Rad18	70	39.842	Rattus_norvegicus
ENSXMAG00000001516	rad18	94	40.327	ENSRBIG00000044173	RAD18	69	40.054	Rhinopithecus_bieti
ENSXMAG00000001516	rad18	94	42.005	ENSRROG00000043948	RAD18	69	42.005	Rhinopithecus_roxellana
ENSXMAG00000001516	rad18	95	39.467	ENSSBOG00000008434	-	69	39.467	Saimiri_boliviensis_boliviensis
ENSXMAG00000001516	rad18	93	36.685	ENSSHAG00000012472	-	84	36.685	Sarcophilus_harrisii
ENSXMAG00000001516	rad18	94	49.861	ENSSFOG00015019264	rad18	72	49.861	Scleropages_formosus
ENSXMAG00000001516	rad18	81	39.222	ENSSPUG00000017486	RAD18	96	39.222	Sphenodon_punctatus
ENSXMAG00000001516	rad18	95	63.784	ENSSPAG00000007165	rad18	75	63.784	Stegastes_partitus
ENSXMAG00000001516	rad18	95	40.053	ENSSSCG00000026158	RAD18	69	40.053	Sus_scrofa
ENSXMAG00000001516	rad18	90	43.020	ENSTGUG00000010405	RAD18	74	43.020	Taeniopygia_guttata
ENSXMAG00000001516	rad18	95	60.108	ENSTRUG00000003517	rad18	100	60.108	Takifugu_rubripes
ENSXMAG00000001516	rad18	95	57.995	ENSTNIG00000014625	rad18	96	57.995	Tetraodon_nigroviridis
ENSXMAG00000001516	rad18	95	39.894	ENSTTRG00000005034	RAD18	69	40.426	Tursiops_truncatus
ENSXMAG00000001516	rad18	95	39.678	ENSUMAG00000019279	RAD18	69	39.678	Ursus_maritimus
ENSXMAG00000001516	rad18	95	36.997	ENSVPAG00000002063	RAD18	75	36.997	Vicugna_pacos
ENSXMAG00000001516	rad18	95	38.933	ENSVVUG00000025318	RAD18	71	38.933	Vulpes_vulpes
ENSXMAG00000001516	rad18	92	38.736	ENSXETG00000033878	RAD18	90	38.462	Xenopus_tropicalis
ENSXMAG00000001516	rad18	100	95.722	ENSXCOG00000020018	rad18	100	95.722	Xiphophorus_couchianus