EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001551 (Gene tree)
Gene ID: 102235920
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7812 bases
Position: chr18:13620652-13628463
Accession: 102235920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000001549	HARE-HTH	PF05066.13	1.2e-15	1	1
ENSXMAP00000027512	HARE-HTH	PF05066.13	3.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000039300	-	1845	XM_023351568	ENSXMAP00000027512	525 (aa)	XP_023207336	UPI000C6D8B31
ENSXMAT00000001552	-	1908	XM_005808908	ENSXMAP00000001549	546 (aa)	XP_005808965	M3ZH57

Gene Model

Click here to download ENSXMAG00000001551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001551's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001551	tbrg1	100	84.249	ENSAPOG00000017352	tbrg1	100	84.249	Acanthochromis_polyacanthus
ENSXMAG00000001551	tbrg1	92	80.512	ENSACIG00000021274	tbrg1	94	80.512	Amphilophus_citrinellus
ENSXMAG00000001551	tbrg1	100	83.883	ENSAOCG00000018605	tbrg1	100	83.883	Amphiprion_ocellaris
ENSXMAG00000001551	tbrg1	100	83.883	ENSAPEG00000022443	tbrg1	100	83.883	Amphiprion_percula
ENSXMAG00000001551	tbrg1	100	83.424	ENSATEG00000023537	tbrg1	100	83.424	Anabas_testudineus
ENSXMAG00000001551	tbrg1	100	82.332	ENSACLG00000000281	tbrg1	100	82.332	Astatotilapia_calliptera
ENSXMAG00000001551	tbrg1	92	71.429	ENSAMXG00000008381	tbrg1	91	71.006	Astyanax_mexicanus
ENSXMAG00000001551	tbrg1	100	80.545	ENSCSEG00000002445	tbrg1	100	80.545	Cynoglossus_semilaevis
ENSXMAG00000001551	tbrg1	100	90.659	ENSCVAG00000019626	tbrg1	100	90.659	Cyprinodon_variegatus
ENSXMAG00000001551	tbrg1	94	70.817	ENSDARG00000074996	tbrg1	93	71.206	Danio_rerio
ENSXMAG00000001551	tbrg1	91	49.016	ENSEBUG00000014060	tbrg1	89	49.364	Eptatretus_burgeri
ENSXMAG00000001551	tbrg1	99	74.229	ENSELUG00000017458	tbrg1	99	73.684	Esox_lucius
ENSXMAG00000001551	tbrg1	87	86.902	ENSFHEG00000004283	tbrg1	92	86.902	Fundulus_heteroclitus
ENSXMAG00000001551	tbrg1	100	97.436	ENSGAFG00000000204	tbrg1	100	97.436	Gambusia_affinis
ENSXMAG00000001551	tbrg1	100	82.332	ENSHBUG00000004935	tbrg1	100	82.332	Haplochromis_burtoni
ENSXMAG00000001551	tbrg1	100	72.563	ENSHCOG00000010588	tbrg1	100	73.105	Hippocampus_comes
ENSXMAG00000001551	tbrg1	98	67.647	ENSIPUG00000008697	tbrg1	93	70.108	Ictalurus_punctatus
ENSXMAG00000001551	tbrg1	100	83.060	ENSKMAG00000002775	tbrg1	100	83.607	Kryptolebias_marmoratus
ENSXMAG00000001551	tbrg1	99	81.901	ENSLBEG00000017559	tbrg1	94	82.711	Labrus_bergylta
ENSXMAG00000001551	tbrg1	100	69.489	ENSLOCG00000003093	tbrg1	99	70.736	Lepisosteus_oculatus
ENSXMAG00000001551	tbrg1	100	82.878	ENSMAMG00000000876	tbrg1	100	82.878	Mastacembelus_armatus
ENSXMAG00000001551	tbrg1	100	82.332	ENSMZEG00005013545	tbrg1	92	82.332	Maylandia_zebra
ENSXMAG00000001551	tbrg1	93	77.973	ENSMMOG00000005314	tbrg1	93	77.973	Mola_mola
ENSXMAG00000001551	tbrg1	94	82.913	ENSMALG00000011630	tbrg1	99	83.398	Monopterus_albus
ENSXMAG00000001551	tbrg1	98	81.447	ENSNBRG00000017490	tbrg1	100	81.447	Neolamprologus_brichardi
ENSXMAG00000001551	tbrg1	100	82.696	ENSONIG00000005284	tbrg1	100	82.696	Oreochromis_niloticus
ENSXMAG00000001551	tbrg1	100	79.599	ENSORLG00000014519	tbrg1	100	79.599	Oryzias_latipes
ENSXMAG00000001551	tbrg1	100	78.689	ENSORLG00020009567	tbrg1	100	78.689	Oryzias_latipes_hni
ENSXMAG00000001551	tbrg1	100	79.599	ENSORLG00015000448	tbrg1	100	79.599	Oryzias_latipes_hsok
ENSXMAG00000001551	tbrg1	100	80.692	ENSOMEG00000006130	tbrg1	100	80.692	Oryzias_melastigma
ENSXMAG00000001551	tbrg1	95	70.321	ENSPKIG00000012274	tbrg1	89	70.321	Paramormyrops_kingsleyae
ENSXMAG00000001551	tbrg1	100	75.676	ENSPMGG00000015968	tbrg1	100	75.806	Periophthalmus_magnuspinnatus
ENSXMAG00000001551	tbrg1	100	97.253	ENSPFOG00000004279	tbrg1	100	97.253	Poecilia_formosa
ENSXMAG00000001551	tbrg1	100	97.619	ENSPLAG00000001227	tbrg1	100	97.619	Poecilia_latipinna
ENSXMAG00000001551	tbrg1	100	97.070	ENSPMEG00000000955	tbrg1	100	97.070	Poecilia_mexicana
ENSXMAG00000001551	tbrg1	100	96.886	ENSPREG00000005246	tbrg1	100	96.886	Poecilia_reticulata
ENSXMAG00000001551	tbrg1	88	81.497	ENSPNYG00000012625	tbrg1	100	81.497	Pundamilia_nyererei
ENSXMAG00000001551	tbrg1	98	68.007	ENSPNAG00000028332	tbrg1	98	68.836	Pygocentrus_nattereri
ENSXMAG00000001551	tbrg1	92	73.346	ENSSFOG00015009308	tbrg1	86	73.541	Scleropages_formosus
ENSXMAG00000001551	tbrg1	100	80.037	ENSSMAG00000002529	tbrg1	100	80.037	Scophthalmus_maximus
ENSXMAG00000001551	tbrg1	99	85.192	ENSSDUG00000013674	tbrg1	99	85.192	Seriola_dumerili
ENSXMAG00000001551	tbrg1	94	83.685	ENSSLDG00000008932	tbrg1	99	83.685	Seriola_lalandi_dorsalis
ENSXMAG00000001551	tbrg1	86	83.547	ENSSPAG00000004808	tbrg1	99	83.547	Stegastes_partitus
ENSXMAG00000001551	tbrg1	95	77.159	ENSTRUG00000005960	tbrg1	98	77.351	Takifugu_rubripes