EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001598 (Gene tree)
Gene ID: 102237119
Gene Symbol: acin1b
Alias: acinus|acinusb|fi14c05|wu:fe06a10|wu:fi14c05
Full Name: apoptotic chromatin condensation inducer in the nucleus-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 23971 bases
Position: chr14:10486210-10510180
Accession: 102237119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000001600	SAP	PF02037.27	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000001603	-	3660	XM_014471832	ENSXMAP00000001600	1219 (aa)	XP_014327318	M3ZHA8

Gene Model

Click here to download ENSXMAG00000001598's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG
xma03015	mRNA surveillance pathway	KEGG
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001598	acin1b	90	66.807	ENSAOCG00000018649	acin1b	67	77.835	Amphiprion_ocellaris
ENSXMAG00000001598	acin1b	74	62.548	ENSAMXG00000036892	acin1b	55	63.793	Astyanax_mexicanus
ENSXMAG00000001598	acin1b	95	81.896	ENSCVAG00000009841	acin1b	80	80.230	Cyprinodon_variegatus
ENSXMAG00000001598	acin1b	73	60.118	ENSELUG00000003511	acin1b	60	63.758	Esox_lucius
ENSXMAG00000001598	acin1b	90	95.155	ENSGAFG00000003479	acin1b	98	92.445	Gambusia_affinis
ENSXMAG00000001598	acin1b	86	63.485	ENSHCOG00000000814	acin1b	88	86.316	Hippocampus_comes
ENSXMAG00000001598	acin1b	90	69.408	ENSMAMG00000015673	acin1b	80	68.233	Mastacembelus_armatus
ENSXMAG00000001598	acin1b	63	62.148	ENSPKIG00000006917	-	53	63.158	Paramormyrops_kingsleyae
ENSXMAG00000001598	acin1b	70	67.347	ENSPMGG00000018777	acin1b	77	69.498	Periophthalmus_magnuspinnatus
ENSXMAG00000001598	acin1b	95	91.436	ENSPFOG00000009202	acin1b	97	91.446	Poecilia_formosa
ENSXMAG00000001598	acin1b	95	91.184	ENSPLAG00000021380	acin1b	97	91.111	Poecilia_latipinna
ENSXMAG00000001598	acin1b	95	92.114	ENSPMEG00000000313	acin1b	97	92.631	Poecilia_mexicana
ENSXMAG00000001598	acin1b	95	91.753	ENSPREG00000004790	acin1b	97	90.815	Poecilia_reticulata
ENSXMAG00000001598	acin1b	69	61.384	ENSPNAG00000022123	acin1b	53	64.234	Pygocentrus_nattereri
ENSXMAG00000001598	acin1b	81	55.397	ENSSFOG00015006344	acin1b	56	57.816	Scleropages_formosus
ENSXMAG00000001598	acin1b	68	77.358	ENSTRUG00000008622	acin1b	63	77.358	Takifugu_rubripes
ENSXMAG00000001598	acin1b	84	80.469	ENSTNIG00000013841	acin1b	64	65.205	Tetraodon_nigroviridis