EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001680 (Gene tree)
Gene ID: 102232018
Gene Symbol: urm1
Alias: si:dkeyp-68f6.2
Full Name: ubiquitin related modifier 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 9191 bases
Position: chr8:8619853-8629043
Accession: 102232018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000001670	Urm1	PF09138.11	1.8e-38	1	1
ENSXMAP00000025899	Urm1	PF09138.11	1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000001673	-	1267	XM_005799665	ENSXMAP00000001670	101 (aa)	XP_005799722	M3ZHH8
ENSXMAT00000030654	-	1806	-	ENSXMAP00000025899	129 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000001680's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04122	Sulfur relay system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001680	urm1	100	78.218	ENSG00000167118	URM1	100	78.218	Homo_sapiens
ENSXMAG00000001680	urm1	100	90.099	ENSAPOG00000009382	urm1	100	90.099	Acanthochromis_polyacanthus
ENSXMAG00000001680	urm1	100	78.218	ENSAMEG00000015446	URM1	100	78.218	Ailuropoda_melanoleuca
ENSXMAG00000001680	urm1	100	66.990	ENSACIG00000005345	urm1	100	66.990	Amphilophus_citrinellus
ENSXMAG00000001680	urm1	100	91.089	ENSAPEG00000007448	urm1	100	91.089	Amphiprion_percula
ENSXMAG00000001680	urm1	100	89.109	ENSATEG00000019659	urm1	100	89.109	Anabas_testudineus
ENSXMAG00000001680	urm1	90	81.319	ENSAPLG00000008603	URM1	100	81.319	Anas_platyrhynchos
ENSXMAG00000001680	urm1	100	82.178	ENSACAG00000010428	-	100	82.178	Anolis_carolinensis
ENSXMAG00000001680	urm1	100	79.208	ENSANAG00000036717	URM1	100	79.208	Aotus_nancymaae
ENSXMAG00000001680	urm1	100	92.079	ENSACLG00000022484	urm1	100	92.079	Astatotilapia_calliptera
ENSXMAG00000001680	urm1	89	75.556	ENSAMXG00000042562	urm1	89	75.556	Astyanax_mexicanus
ENSXMAG00000001680	urm1	100	79.208	ENSBTAG00000025612	URM1	100	79.208	Bos_taurus
ENSXMAG00000001680	urm1	98	33.981	WBGene00185048	urm-1	99	33.981	Caenorhabditis_elegans
ENSXMAG00000001680	urm1	100	80.198	ENSCJAG00000020036	URM1	100	80.198	Callithrix_jacchus
ENSXMAG00000001680	urm1	100	80.198	ENSCAFG00000023618	URM1	100	80.198	Canis_familiaris
ENSXMAG00000001680	urm1	99	61.000	ENSCHIG00000012547	-	99	61.000	Capra_hircus
ENSXMAG00000001680	urm1	100	78.218	ENSTSYG00000028376	URM1	100	78.218	Carlito_syrichta
ENSXMAG00000001680	urm1	64	81.538	ENSCAPG00000002189	-	100	81.538	Cavia_aperea
ENSXMAG00000001680	urm1	100	80.198	ENSCPOG00000039069	URM1	100	80.198	Cavia_porcellus
ENSXMAG00000001680	urm1	100	80.198	ENSCCAG00000032510	URM1	100	80.198	Cebus_capucinus
ENSXMAG00000001680	urm1	100	79.208	ENSCATG00000033068	URM1	100	79.208	Cercocebus_atys
ENSXMAG00000001680	urm1	100	80.198	ENSCLAG00000001791	URM1	100	80.198	Chinchilla_lanigera
ENSXMAG00000001680	urm1	78	78.481	ENSCSAG00000014200	URM1	56	79.012	Chlorocebus_sabaeus
ENSXMAG00000001680	urm1	100	81.188	ENSCPBG00000025196	URM1	100	81.188	Chrysemys_picta_bellii
ENSXMAG00000001680	urm1	100	79.208	ENSCANG00000012760	URM1	100	79.208	Colobus_angolensis_palliatus
ENSXMAG00000001680	urm1	100	78.218	ENSCGRG00001023888	Urm1	100	78.218	Cricetulus_griseus_chok1gshd
ENSXMAG00000001680	urm1	100	78.218	ENSCGRG00000005358	Urm1	100	78.218	Cricetulus_griseus_crigri
ENSXMAG00000001680	urm1	100	79.208	ENSCSEG00000016193	urm1	100	79.208	Cynoglossus_semilaevis
ENSXMAG00000001680	urm1	84	81.176	ENSCVAG00000011864	urm1	77	81.176	Cyprinodon_variegatus
ENSXMAG00000001680	urm1	100	86.139	ENSDARG00000091198	urm1	100	86.139	Danio_rerio
ENSXMAG00000001680	urm1	79	78.750	ENSDNOG00000039086	URM1	56	78.481	Dasypus_novemcinctus
ENSXMAG00000001680	urm1	100	76.238	ENSDORG00000028424	Urm1	100	76.238	Dipodomys_ordii
ENSXMAG00000001680	urm1	100	58.824	FBgn0053276	Urm1	100	58.824	Drosophila_melanogaster
ENSXMAG00000001680	urm1	100	75.248	ENSETEG00000000039	-	100	75.248	Echinops_telfairi
ENSXMAG00000001680	urm1	64	83.077	ENSEASG00005016204	-	60	83.077	Equus_asinus_asinus
ENSXMAG00000001680	urm1	100	77.228	ENSEEUG00000012945	URM1	100	77.228	Erinaceus_europaeus
ENSXMAG00000001680	urm1	100	90.099	ENSELUG00000006757	URM1	100	90.099	Esox_lucius
ENSXMAG00000001680	urm1	100	80.198	ENSFCAG00000005842	URM1	100	80.198	Felis_catus
ENSXMAG00000001680	urm1	90	79.121	ENSFALG00000001360	URM1	100	79.121	Ficedula_albicollis
ENSXMAG00000001680	urm1	100	79.208	ENSFDAG00000013113	URM1	100	79.208	Fukomys_damarensis
ENSXMAG00000001680	urm1	100	87.129	ENSGMOG00000006245	urm1	100	87.129	Gadus_morhua
ENSXMAG00000001680	urm1	100	80.198	ENSGALG00000004971	URM1	100	80.198	Gallus_gallus
ENSXMAG00000001680	urm1	100	100.000	ENSGAFG00000007518	urm1	100	100.000	Gambusia_affinis
ENSXMAG00000001680	urm1	100	90.099	ENSGACG00000017389	urm1	100	90.099	Gasterosteus_aculeatus
ENSXMAG00000001680	urm1	100	81.188	ENSGAGG00000022865	URM1	100	81.188	Gopherus_agassizii
ENSXMAG00000001680	urm1	100	78.218	ENSGGOG00000014806	URM1	100	78.218	Gorilla_gorilla
ENSXMAG00000001680	urm1	100	93.069	ENSHBUG00000001440	urm1	100	93.069	Haplochromis_burtoni
ENSXMAG00000001680	urm1	100	80.198	ENSHGLG00000016662	URM1	100	80.198	Heterocephalus_glaber_female
ENSXMAG00000001680	urm1	100	80.198	ENSHGLG00100019392	URM1	100	80.198	Heterocephalus_glaber_male
ENSXMAG00000001680	urm1	100	83.168	ENSHCOG00000002828	urm1	100	83.168	Hippocampus_comes
ENSXMAG00000001680	urm1	100	91.089	ENSIPUG00000020621	urm1	55	91.089	Ictalurus_punctatus
ENSXMAG00000001680	urm1	100	79.208	ENSSTOG00000025351	URM1	100	79.208	Ictidomys_tridecemlineatus
ENSXMAG00000001680	urm1	100	72.277	ENSJJAG00000011074	-	100	72.277	Jaculus_jaculus
ENSXMAG00000001680	urm1	100	78.218	ENSJJAG00000014799	-	100	78.218	Jaculus_jaculus
ENSXMAG00000001680	urm1	100	92.079	ENSKMAG00000011433	urm1	100	92.079	Kryptolebias_marmoratus
ENSXMAG00000001680	urm1	78	93.671	ENSLBEG00000004555	urm1	78	89.011	Labrus_bergylta
ENSXMAG00000001680	urm1	100	80.198	ENSLACG00000016968	URM1	100	80.198	Latimeria_chalumnae
ENSXMAG00000001680	urm1	100	86.139	ENSLOCG00000002768	urm1	100	86.139	Lepisosteus_oculatus
ENSXMAG00000001680	urm1	100	77.670	ENSLAFG00000002178	URM1	100	77.670	Loxodonta_africana
ENSXMAG00000001680	urm1	100	79.208	ENSMFAG00000035214	URM1	100	79.208	Macaca_fascicularis
ENSXMAG00000001680	urm1	97	74.490	ENSMMUG00000018612	URM1	99	74.490	Macaca_mulatta
ENSXMAG00000001680	urm1	100	79.208	ENSMLEG00000028542	URM1	100	79.208	Mandrillus_leucophaeus
ENSXMAG00000001680	urm1	100	91.089	ENSMAMG00000008703	urm1	100	91.089	Mastacembelus_armatus
ENSXMAG00000001680	urm1	100	92.079	ENSMZEG00005017191	urm1	100	92.079	Maylandia_zebra
ENSXMAG00000001680	urm1	90	81.319	ENSMGAG00000003812	URM1	100	81.319	Meleagris_gallopavo
ENSXMAG00000001680	urm1	100	77.228	ENSMAUG00000000479	Urm1	100	77.228	Mesocricetus_auratus
ENSXMAG00000001680	urm1	100	79.208	ENSMICG00000042967	URM1	100	79.208	Microcebus_murinus
ENSXMAG00000001680	urm1	100	78.218	ENSMOCG00000007365	Urm1	100	78.218	Microtus_ochrogaster
ENSXMAG00000001680	urm1	100	94.059	ENSMMOG00000021296	urm1	100	94.059	Mola_mola
ENSXMAG00000001680	urm1	100	82.178	ENSMODG00000023353	URM1	100	82.178	Monodelphis_domestica
ENSXMAG00000001680	urm1	100	88.119	ENSMALG00000018227	urm1	100	88.119	Monopterus_albus
ENSXMAG00000001680	urm1	100	80.198	MGP_CAROLIEiJ_G0023372	Urm1	100	80.198	Mus_caroli
ENSXMAG00000001680	urm1	100	80.198	ENSMUSG00000069020	Urm1	100	80.198	Mus_musculus
ENSXMAG00000001680	urm1	100	81.188	MGP_PahariEiJ_G0024829	Urm1	100	81.188	Mus_pahari
ENSXMAG00000001680	urm1	100	81.188	MGP_SPRETEiJ_G0024289	Urm1	100	81.188	Mus_spretus
ENSXMAG00000001680	urm1	100	80.198	ENSMPUG00000013184	URM1	100	80.198	Mustela_putorius_furo
ENSXMAG00000001680	urm1	78	79.747	ENSMLUG00000007275	URM1	100	79.747	Myotis_lucifugus
ENSXMAG00000001680	urm1	100	78.218	ENSNGAG00000007112	Urm1	100	78.218	Nannospalax_galili
ENSXMAG00000001680	urm1	100	91.089	ENSNBRG00000009012	urm1	100	91.089	Neolamprologus_brichardi
ENSXMAG00000001680	urm1	100	79.208	ENSNLEG00000031211	URM1	100	79.208	Nomascus_leucogenys
ENSXMAG00000001680	urm1	100	83.168	ENSMEUG00000014147	-	100	83.168	Notamacropus_eugenii
ENSXMAG00000001680	urm1	100	80.198	ENSOPRG00000002058	URM1	100	80.198	Ochotona_princeps
ENSXMAG00000001680	urm1	100	79.208	ENSODEG00000017296	URM1	100	79.208	Octodon_degus
ENSXMAG00000001680	urm1	100	91.089	ENSONIG00000003910	urm1	100	91.089	Oreochromis_niloticus
ENSXMAG00000001680	urm1	88	85.393	ENSOANG00000003949	-	92	85.393	Ornithorhynchus_anatinus
ENSXMAG00000001680	urm1	97	80.612	ENSOCUG00000008848	URM1	100	80.612	Oryctolagus_cuniculus
ENSXMAG00000001680	urm1	100	93.069	ENSORLG00000024432	urm1	100	93.069	Oryzias_latipes
ENSXMAG00000001680	urm1	100	92.079	ENSORLG00020000333	urm1	100	92.079	Oryzias_latipes_hni
ENSXMAG00000001680	urm1	92	90.323	ENSORLG00015001370	urm1	68	90.323	Oryzias_latipes_hsok
ENSXMAG00000001680	urm1	100	93.069	ENSOMEG00000023257	urm1	100	93.069	Oryzias_melastigma
ENSXMAG00000001680	urm1	100	81.188	ENSOGAG00000001445	URM1	100	81.188	Otolemur_garnettii
ENSXMAG00000001680	urm1	100	79.208	ENSOARG00000010218	URM1	100	79.208	Ovis_aries
ENSXMAG00000001680	urm1	100	78.218	ENSPPAG00000030946	URM1	100	78.218	Pan_paniscus
ENSXMAG00000001680	urm1	100	79.208	ENSPPRG00000008861	URM1	100	79.208	Panthera_pardus
ENSXMAG00000001680	urm1	100	78.218	ENSPTIG00000012500	URM1	100	78.218	Panthera_tigris_altaica
ENSXMAG00000001680	urm1	100	78.218	ENSPTRG00000021427	URM1	100	78.218	Pan_troglodytes
ENSXMAG00000001680	urm1	100	79.208	ENSPANG00000025883	URM1	100	79.208	Papio_anubis
ENSXMAG00000001680	urm1	100	84.158	ENSPKIG00000021455	urm1	100	84.158	Paramormyrops_kingsleyae
ENSXMAG00000001680	urm1	100	79.208	ENSPSIG00000014442	URM1	100	79.208	Pelodiscus_sinensis
ENSXMAG00000001680	urm1	78	88.608	ENSPMGG00000023974	urm1	82	79.381	Periophthalmus_magnuspinnatus
ENSXMAG00000001680	urm1	100	75.248	ENSPMAG00000007668	urm1	100	75.248	Petromyzon_marinus
ENSXMAG00000001680	urm1	87	81.818	ENSPCIG00000026786	-	84	81.818	Phascolarctos_cinereus
ENSXMAG00000001680	urm1	100	100.000	ENSPFOG00000019694	urm1	100	100.000	Poecilia_formosa
ENSXMAG00000001680	urm1	100	100.000	ENSPLAG00000021729	urm1	100	100.000	Poecilia_latipinna
ENSXMAG00000001680	urm1	100	100.000	ENSPMEG00000009764	urm1	100	100.000	Poecilia_mexicana
ENSXMAG00000001680	urm1	100	100.000	ENSPREG00000008611	urm1	100	100.000	Poecilia_reticulata
ENSXMAG00000001680	urm1	100	78.218	ENSPPYG00000019649	-	100	78.218	Pongo_abelii
ENSXMAG00000001680	urm1	78	78.481	ENSPCAG00000015239	URM1	100	78.481	Procavia_capensis
ENSXMAG00000001680	urm1	100	79.208	ENSPCOG00000021449	URM1	100	79.208	Propithecus_coquereli
ENSXMAG00000001680	urm1	100	79.208	ENSPVAG00000001227	URM1	100	79.208	Pteropus_vampyrus
ENSXMAG00000001680	urm1	100	92.079	ENSPNYG00000012446	urm1	100	92.079	Pundamilia_nyererei
ENSXMAG00000001680	urm1	100	90.099	ENSPNAG00000017145	urm1	100	90.099	Pygocentrus_nattereri
ENSXMAG00000001680	urm1	100	81.188	ENSRNOG00000026636	Urm1	100	81.188	Rattus_norvegicus
ENSXMAG00000001680	urm1	100	79.208	ENSRBIG00000041054	URM1	100	79.208	Rhinopithecus_bieti
ENSXMAG00000001680	urm1	100	79.208	ENSRROG00000038638	URM1	100	79.208	Rhinopithecus_roxellana
ENSXMAG00000001680	urm1	96	40.404	YIL008W	-	99	40.404	Saccharomyces_cerevisiae
ENSXMAG00000001680	urm1	100	80.198	ENSSBOG00000030293	URM1	100	80.198	Saimiri_boliviensis_boliviensis
ENSXMAG00000001680	urm1	100	87.129	ENSSFOG00015000673	urm1	56	87.129	Scleropages_formosus
ENSXMAG00000001680	urm1	100	92.079	ENSSMAG00000019927	urm1	100	92.079	Scophthalmus_maximus
ENSXMAG00000001680	urm1	100	95.050	ENSSDUG00000000566	urm1	100	95.050	Seriola_dumerili
ENSXMAG00000001680	urm1	100	95.050	ENSSLDG00000012250	urm1	100	95.050	Seriola_lalandi_dorsalis
ENSXMAG00000001680	urm1	100	80.198	ENSSPUG00000015548	URM1	100	80.198	Sphenodon_punctatus
ENSXMAG00000001680	urm1	100	94.059	ENSSPAG00000001097	urm1	100	94.059	Stegastes_partitus
ENSXMAG00000001680	urm1	100	81.188	ENSSSCG00000005649	URM1	100	81.188	Sus_scrofa
ENSXMAG00000001680	urm1	90	79.121	ENSTGUG00000003654	URM1	100	79.121	Taeniopygia_guttata
ENSXMAG00000001680	urm1	100	89.109	ENSTRUG00000008530	urm1	100	89.109	Takifugu_rubripes
ENSXMAG00000001680	urm1	100	89.216	ENSTNIG00000013204	urm1	100	89.216	Tetraodon_nigroviridis
ENSXMAG00000001680	urm1	100	59.406	ENSTBEG00000002675	-	100	59.406	Tupaia_belangeri
ENSXMAG00000001680	urm1	100	78.218	ENSTTRG00000016490	URM1	100	78.218	Tursiops_truncatus
ENSXMAG00000001680	urm1	100	77.228	ENSUAMG00000020279	URM1	100	77.228	Ursus_americanus
ENSXMAG00000001680	urm1	78	75.949	ENSUMAG00000022029	-	83	73.810	Ursus_maritimus
ENSXMAG00000001680	urm1	64	100.000	ENSXCOG00000004982	urm1	80	100.000	Xiphophorus_couchianus