EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000001802 (Gene tree)
Gene ID
102225525
Gene Symbol
rbms1a
Alias
fe16a10|rbms1|wu:fe16a10
Full Name
RNA-binding motif%2C single-stranded-interacting protein 1-like
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Minus strand
Length
17361 bases
Position
chr4:23410865-23428225
Accession
102225525
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000039974RRM_1PF00076.221.1e-3012
ENSXMAP00000039974RRM_1PF00076.221.1e-3022
ENSXMAP00000001813RRM_1PF00076.221.3e-3012
ENSXMAP00000001813RRM_1PF00076.221.3e-3022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000025044-1071-ENSXMAP00000039974356 (aa)--
ENSXMAT00000001817-3776XM_005799721ENSXMAP00000001813371 (aa)XP_005799778M3ZHX1
Gene Model
Click here to download ENSXMAG00000001802's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001802's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000001802rbms1a8965.994ENSG00000153250RBMS19681.148Homo_sapiens
ENSXMAG00000001802rbms1a9965.903ENSAPOG00000024437-9966.071Acanthochromis_polyacanthus
ENSXMAG00000001802rbms1a10095.957ENSAPOG00000013761rbms1a10095.957Acanthochromis_polyacanthus
ENSXMAG00000001802rbms1a8965.230ENSAMEG00000012661RBMS19564.560Ailuropoda_melanoleuca
ENSXMAG00000001802rbms1a8967.442ENSACIG00000021498RBMS19166.667Amphilophus_citrinellus
ENSXMAG00000001802rbms1a10086.389ENSACIG00000000113rbms1a10086.667Amphilophus_citrinellus
ENSXMAG00000001802rbms1a10095.687ENSAOCG00000010066rbms1a10095.687Amphiprion_ocellaris
ENSXMAG00000001802rbms1a9965.816ENSAOCG00000014482-9966.496Amphiprion_ocellaris
ENSXMAG00000001802rbms1a9965.561ENSAPEG00000018371-9966.240Amphiprion_percula
ENSXMAG00000001802rbms1a10095.957ENSAPEG00000023563rbms1a10095.957Amphiprion_percula
ENSXMAG00000001802rbms1a10094.340ENSATEG00000015450rbms1a10094.340Anabas_testudineus
ENSXMAG00000001802rbms1a9965.722ENSATEG00000018573RBMS19965.722Anabas_testudineus
ENSXMAG00000001802rbms1a8965.698ENSAPLG00000007282RBMS19165.000Anas_platyrhynchos
ENSXMAG00000001802rbms1a9562.730ENSACAG00000011984RBMS17264.655Anolis_carolinensis
ENSXMAG00000001802rbms1a8164.353ENSANAG00000024424RBMS19864.353Aotus_nancymaae
ENSXMAG00000001802rbms1a10092.453ENSACLG00000021512rbms1a10092.722Astatotilapia_calliptera
ENSXMAG00000001802rbms1a9964.872ENSACLG00000013048RBMS19964.872Astatotilapia_calliptera
ENSXMAG00000001802rbms1a9966.923ENSAMXG00000009969RBMS19966.410Astyanax_mexicanus
ENSXMAG00000001802rbms1a9962.755ENSAMXG00000002146rbms1a9863.171Astyanax_mexicanus
ENSXMAG00000001802rbms1a8966.282ENSBTAG00000005180RBMS19962.406Bos_taurus
ENSXMAG00000001802rbms1a9660.847ENSCJAG00000012871-9263.768Callithrix_jacchus
ENSXMAG00000001802rbms1a8961.628ENSCJAG00000022465-9461.449Callithrix_jacchus
ENSXMAG00000001802rbms1a8965.797ENSCJAG00000014861-8865.507Callithrix_jacchus
ENSXMAG00000001802rbms1a8965.994ENSCAFG00000009922RBMS19962.155Canis_familiaris
ENSXMAG00000001802rbms1a8965.988ENSCAFG00020006120RBMS19959.709Canis_lupus_dingo
ENSXMAG00000001802rbms1a8966.279ENSCHIG00000023380RBMS18965.556Capra_hircus
ENSXMAG00000001802rbms1a8965.994ENSTSYG00000005584RBMS19765.278Carlito_syrichta
ENSXMAG00000001802rbms1a8965.706ENSCPOG00000012310RBMS19562.234Cavia_porcellus
ENSXMAG00000001802rbms1a8965.706ENSCCAG00000033841RBMS19465.014Cebus_capucinus
ENSXMAG00000001802rbms1a8965.994ENSCATG00000043032RBMS19765.278Cercocebus_atys
ENSXMAG00000001802rbms1a8965.706ENSCLAG00000003031RBMS19762.234Chinchilla_lanigera
ENSXMAG00000001802rbms1a8965.994ENSCSAG00000015687RBMS18965.289Chlorocebus_sabaeus
ENSXMAG00000001802rbms1a6283.750ENSCHOG00000001579RBMS15682.716Choloepus_hoffmanni
ENSXMAG00000001802rbms1a8965.994ENSCPBG00000026455RBMS19962.469Chrysemys_picta_bellii
ENSXMAG00000001802rbms1a8965.994ENSCANG00000042152RBMS19765.278Colobus_angolensis_palliatus
ENSXMAG00000001802rbms1a8965.116ENSCGRG00001022833Rbms18964.444Cricetulus_griseus_chok1gshd
ENSXMAG00000001802rbms1a8965.116ENSCGRG00000008824Rbms19561.702Cricetulus_griseus_crigri
ENSXMAG00000001802rbms1a10091.935ENSCSEG00000000889rbms1a10091.935Cynoglossus_semilaevis
ENSXMAG00000001802rbms1a9962.755ENSCSEG00000010652RBMS19863.010Cynoglossus_semilaevis
ENSXMAG00000001802rbms1a9967.098ENSCVAG00000002027RBMS19966.580Cyprinodon_variegatus
ENSXMAG00000001802rbms1a10097.305ENSCVAG00000014698rbms1a10097.305Cyprinodon_variegatus
ENSXMAG00000001802rbms1a9962.087ENSDARG00000074023rbms1a9863.359Danio_rerio
ENSXMAG00000001802rbms1a8963.636ENSDNOG00000040691RBMS19763.061Dasypus_novemcinctus
ENSXMAG00000001802rbms1a8965.994ENSDORG00000007103Rbms19762.500Dipodomys_ordii
ENSXMAG00000001802rbms1a8958.382ENSETEG00000012135RBMS19558.011Echinops_telfairi
ENSXMAG00000001802rbms1a8965.994ENSEASG00005023132RBMS19962.406Equus_asinus_asinus
ENSXMAG00000001802rbms1a8965.994ENSECAG00000019894RBMS19959.951Equus_caballus
ENSXMAG00000001802rbms1a5483.673ENSEEUG00000005628RBMS15382.000Erinaceus_europaeus
ENSXMAG00000001802rbms1a10073.684ENSELUG00000018923rbms1a10074.474Esox_lucius
ENSXMAG00000001802rbms1a8957.558ENSELUG00000019328RBMS18557.558Esox_lucius
ENSXMAG00000001802rbms1a8966.282ENSFCAG00000012524RBMS19765.556Felis_catus
ENSXMAG00000001802rbms1a8965.988ENSFALG00000004440RBMS19765.278Ficedula_albicollis
ENSXMAG00000001802rbms1a8965.994ENSFDAG00000015692RBMS19562.500Fukomys_damarensis
ENSXMAG00000001802rbms1a9965.375ENSFHEG00000000720RBMS19967.183Fundulus_heteroclitus
ENSXMAG00000001802rbms1a10098.383ENSFHEG00000005662rbms1a10098.383Fundulus_heteroclitus
ENSXMAG00000001802rbms1a9177.364ENSGMOG00000000525rbms1a10077.364Gadus_morhua
ENSXMAG00000001802rbms1a8965.994ENSGALG00000011132RBMS19765.289Gallus_gallus
ENSXMAG00000001802rbms1a9799.133ENSGAFG00000011633rbms1a100100.000Gambusia_affinis
ENSXMAG00000001802rbms1a9965.641ENSGAFG00000007708RBMS19965.641Gambusia_affinis
ENSXMAG00000001802rbms1a8893.598ENSGACG00000015174rbms1a9493.598Gasterosteus_aculeatus
ENSXMAG00000001802rbms1a9965.464ENSGACG00000005671RBMS19965.375Gasterosteus_aculeatus
ENSXMAG00000001802rbms1a9962.720ENSGAGG00000007866RBMS19962.469Gopherus_agassizii
ENSXMAG00000001802rbms1a9164.489ENSGGOG00000043756-10061.139Gorilla_gorilla
ENSXMAG00000001802rbms1a8965.994ENSGGOG00000001264RBMS19765.278Gorilla_gorilla
ENSXMAG00000001802rbms1a10092.453ENSHBUG00000004802rbms1a10092.722Haplochromis_burtoni
ENSXMAG00000001802rbms1a9465.668ENSHBUG00000004516RBMS19766.213Haplochromis_burtoni
ENSXMAG00000001802rbms1a8966.087ENSHGLG00000010387RBMS19562.599Heterocephalus_glaber_female
ENSXMAG00000001802rbms1a8966.087ENSHGLG00100014105RBMS19562.599Heterocephalus_glaber_male
ENSXMAG00000001802rbms1a9963.077ENSHCOG00000016668RBMS19863.077Hippocampus_comes
ENSXMAG00000001802rbms1a10092.722ENSHCOG00000020097rbms1a10092.722Hippocampus_comes
ENSXMAG00000001802rbms1a9863.239ENSIPUG00000010131RBMS19763.496Ictalurus_punctatus
ENSXMAG00000001802rbms1a9967.866ENSIPUG00000014677RBMS19967.866Ictalurus_punctatus
ENSXMAG00000001802rbms1a8966.282ENSSTOG00000012501RBMS19562.766Ictidomys_tridecemlineatus
ENSXMAG00000001802rbms1a8965.407ENSJJAG00000016543Rbms19761.968Jaculus_jaculus
ENSXMAG00000001802rbms1a9965.128ENSKMAG00000013911RBMS19965.641Kryptolebias_marmoratus
ENSXMAG00000001802rbms1a10092.722ENSKMAG00000011839-10092.722Kryptolebias_marmoratus
ENSXMAG00000001802rbms1a10094.340ENSLBEG00000025962rbms1a10094.340Labrus_bergylta
ENSXMAG00000001802rbms1a9964.962ENSLBEG00000005787RBMS19965.473Labrus_bergylta
ENSXMAG00000001802rbms1a9962.814ENSLACG00000004324RBMS19862.563Latimeria_chalumnae
ENSXMAG00000001802rbms1a9965.816ENSLOCG00000008622rbms1a9966.496Lepisosteus_oculatus
ENSXMAG00000001802rbms1a8965.698ENSLAFG00000017217RBMS19565.000Loxodonta_africana
ENSXMAG00000001802rbms1a8965.994ENSMFAG00000000274RBMS19765.278Macaca_fascicularis
ENSXMAG00000001802rbms1a8965.994ENSMMUG00000016825RBMS19565.289Macaca_mulatta
ENSXMAG00000001802rbms1a8965.994ENSMNEG00000039425RBMS19765.278Macaca_nemestrina
ENSXMAG00000001802rbms1a8965.706ENSMLEG00000031517RBMS19765.000Mandrillus_leucophaeus
ENSXMAG00000001802rbms1a10092.453ENSMAMG00000005018rbms1a10092.453Mastacembelus_armatus
ENSXMAG00000001802rbms1a9963.590ENSMAMG00000003159-9964.103Mastacembelus_armatus
ENSXMAG00000001802rbms1a8468.536ENSMZEG00005007313RBMS19467.656Maylandia_zebra
ENSXMAG00000001802rbms1a10092.453ENSMZEG00005005661rbms1a10092.722Maylandia_zebra
ENSXMAG00000001802rbms1a8965.994ENSMGAG00000011054RBMS19864.506Meleagris_gallopavo
ENSXMAG00000001802rbms1a8965.116ENSMAUG00000008550Rbms18964.444Mesocricetus_auratus
ENSXMAG00000001802rbms1a8965.418ENSMICG00000008325RBMS19564.738Microcebus_murinus
ENSXMAG00000001802rbms1a8965.116ENSMOCG00000022617Rbms19761.702Microtus_ochrogaster
ENSXMAG00000001802rbms1a10092.717ENSMMOG00000018249rbms1a10092.717Mola_mola
ENSXMAG00000001802rbms1a9964.706ENSMMOG00000003707RBMS19964.962Mola_mola
ENSXMAG00000001802rbms1a8965.698ENSMODG00000005250RBMS18965.556Monodelphis_domestica
ENSXMAG00000001802rbms1a10093.261ENSMALG00000014235rbms1a10093.261Monopterus_albus
ENSXMAG00000001802rbms1a9666.667ENSMALG00000015715-9965.796Monopterus_albus
ENSXMAG00000001802rbms1a8964.928MGP_CAROLIEiJ_G0023586Rbms19761.538Mus_caroli
ENSXMAG00000001802rbms1a8964.928ENSMUSG00000026970Rbms19761.538Mus_musculus
ENSXMAG00000001802rbms1a8964.928MGP_PahariEiJ_G0025037Rbms19064.266Mus_pahari
ENSXMAG00000001802rbms1a8965.217MGP_SPRETEiJ_G0024508Rbms17980.000Mus_spretus
ENSXMAG00000001802rbms1a8963.056ENSMPUG00000000539RBMS19062.500Mustela_putorius_furo
ENSXMAG00000001802rbms1a8962.983ENSMLUG00000008762RBMS19162.434Myotis_lucifugus
ENSXMAG00000001802rbms1a8965.698ENSNGAG00000013636Rbms18965.000Nannospalax_galili
ENSXMAG00000001802rbms1a8963.372ENSNBRG00000015151RBMS19762.778Neolamprologus_brichardi
ENSXMAG00000001802rbms1a10089.607ENSNBRG00000020217rbms1a10089.888Neolamprologus_brichardi
ENSXMAG00000001802rbms1a8965.994ENSNLEG00000001667RBMS19765.278Nomascus_leucogenys
ENSXMAG00000001802rbms1a8154.890ENSMEUG00000000746RBMS19854.890Notamacropus_eugenii
ENSXMAG00000001802rbms1a8961.095ENSOPRG00000012431RBMS18660.920Ochotona_princeps
ENSXMAG00000001802rbms1a8965.698ENSODEG00000013934RBMS19762.234Octodon_degus
ENSXMAG00000001802rbms1a10090.814ENSONIG00000003329rbms1a10091.076Oreochromis_niloticus
ENSXMAG00000001802rbms1a9965.128ENSONIG00000008934RBMS19965.641Oreochromis_niloticus
ENSXMAG00000001802rbms1a8965.994ENSOANG00000006166RBMS19165.565Ornithorhynchus_anatinus
ENSXMAG00000001802rbms1a5944.583ENSOANG00000004477-10044.583Ornithorhynchus_anatinus
ENSXMAG00000001802rbms1a8966.279ENSOCUG00000017365RBMS18565.556Oryctolagus_cuniculus
ENSXMAG00000001802rbms1a10091.375ENSORLG00000003917rbms1a10091.375Oryzias_latipes
ENSXMAG00000001802rbms1a9465.934ENSORLG00000016818RBMS19764.416Oryzias_latipes
ENSXMAG00000001802rbms1a9465.934ENSORLG00020022335RBMS19764.416Oryzias_latipes_hni
ENSXMAG00000001802rbms1a10091.105ENSORLG00020018663rbms1a10091.105Oryzias_latipes_hni
ENSXMAG00000001802rbms1a9466.484ENSORLG00015018208RBMS19764.935Oryzias_latipes_hsok
ENSXMAG00000001802rbms1a10091.644ENSORLG00015016556rbms1a10091.644Oryzias_latipes_hsok
ENSXMAG00000001802rbms1a9466.575ENSOMEG00000002394RBMS19765.375Oryzias_melastigma
ENSXMAG00000001802rbms1a8965.043ENSOGAG00000002900RBMS19764.384Otolemur_garnettii
ENSXMAG00000001802rbms1a8966.279ENSOARG00000006870RBMS19762.434Ovis_aries
ENSXMAG00000001802rbms1a8963.689ENSPPAG00000036520-9563.085Pan_paniscus
ENSXMAG00000001802rbms1a8965.994ENSPPAG00000040083RBMS19565.289Pan_paniscus
ENSXMAG00000001802rbms1a8966.282ENSPPRG00000005040RBMS19765.556Panthera_pardus
ENSXMAG00000001802rbms1a8966.282ENSPTIG00000021240RBMS19765.556Panthera_tigris_altaica
ENSXMAG00000001802rbms1a8965.994ENSPTRG00000052304RBMS19565.289Pan_troglodytes
ENSXMAG00000001802rbms1a8964.553ENSPTRG00000039358-9860.000Pan_troglodytes
ENSXMAG00000001802rbms1a8965.994ENSPANG00000001383RBMS19565.289Papio_anubis
ENSXMAG00000001802rbms1a9963.753ENSPKIG00000012818rbms1a9964.267Paramormyrops_kingsleyae
ENSXMAG00000001802rbms1a9962.374ENSPKIG00000001498rbms1a9962.626Paramormyrops_kingsleyae
ENSXMAG00000001802rbms1a8965.698ENSPSIG00000010240RBMS18965.000Pelodiscus_sinensis
ENSXMAG00000001802rbms1a8467.752ENSPMGG00000006310RBMS19462.577Periophthalmus_magnuspinnatus
ENSXMAG00000001802rbms1a10087.363ENSPMGG00000004341rbms1a10087.088Periophthalmus_magnuspinnatus
ENSXMAG00000001802rbms1a8965.418ENSPEMG00000009449Rbms19264.738Peromyscus_maniculatus_bairdii
ENSXMAG00000001802rbms1a8965.698ENSPCIG00000018405RBMS19962.374Phascolarctos_cinereus
ENSXMAG00000001802rbms1a9965.985ENSPFOG00000017483RBMS19966.752Poecilia_formosa
ENSXMAG00000001802rbms1a10099.461ENSPFOG00000016116rbms1a10099.461Poecilia_formosa
ENSXMAG00000001802rbms1a9965.897ENSPLAG00000000920RBMS19965.897Poecilia_latipinna
ENSXMAG00000001802rbms1a10099.461ENSPLAG00000013864rbms1a10099.461Poecilia_latipinna
ENSXMAG00000001802rbms1a9965.985ENSPMEG00000015838RBMS19966.752Poecilia_mexicana
ENSXMAG00000001802rbms1a10099.191ENSPMEG00000016185rbms1a10099.191Poecilia_mexicana
ENSXMAG00000001802rbms1a10099.461ENSPREG00000020161rbms1a10099.461Poecilia_reticulata
ENSXMAG00000001802rbms1a9965.729ENSPREG00000008146RBMS19966.496Poecilia_reticulata
ENSXMAG00000001802rbms1a8963.361ENSPPYG00000012879-9062.797Pongo_abelii
ENSXMAG00000001802rbms1a8169.231ENSPCAG00000009673RBMS17868.254Procavia_capensis
ENSXMAG00000001802rbms1a8965.706ENSPCOG00000027294RBMS19765.000Propithecus_coquereli
ENSXMAG00000001802rbms1a7680.368ENSPVAG00000010429RBMS18956.749Pteropus_vampyrus
ENSXMAG00000001802rbms1a9964.615ENSPNYG00000002643RBMS19965.128Pundamilia_nyererei
ENSXMAG00000001802rbms1a8965.598ENSPNAG00000010225rbms1a8765.698Pygocentrus_nattereri
ENSXMAG00000001802rbms1a9967.692ENSPNAG00000023479RBMS19967.179Pygocentrus_nattereri
ENSXMAG00000001802rbms1a8964.826ENSRNOG00000008482Rbms18964.167Rattus_norvegicus
ENSXMAG00000001802rbms1a8966.282ENSRBIG00000044262RBMS19565.385Rhinopithecus_bieti
ENSXMAG00000001802rbms1a8965.994ENSRROG00000043108RBMS19565.289Rhinopithecus_roxellana
ENSXMAG00000001802rbms1a8965.706ENSSBOG00000034705RBMS19765.014Saimiri_boliviensis_boliviensis
ENSXMAG00000001802rbms1a8965.407ENSSHAG00000012271RBMS19960.831Sarcophilus_harrisii
ENSXMAG00000001802rbms1a9963.776ENSSFOG00015022929rbms19963.939Scleropages_formosus
ENSXMAG00000001802rbms1a8967.901ENSSFOG00015014493rbms1a9267.901Scleropages_formosus
ENSXMAG00000001802rbms1a9965.641ENSSMAG00000012152RBMS19565.385Scophthalmus_maximus
ENSXMAG00000001802rbms1a9594.017ENSSMAG00000012722rbms1a10094.017Scophthalmus_maximus
ENSXMAG00000001802rbms1a9964.450ENSSDUG00000018803RBMS19865.128Seriola_dumerili
ENSXMAG00000001802rbms1a10095.687ENSSDUG00000020602rbms1a10096.011Seriola_dumerili
ENSXMAG00000001802rbms1a9964.450ENSSLDG00000016556RBMS19865.128Seriola_lalandi_dorsalis
ENSXMAG00000001802rbms1a10095.687ENSSLDG00000009495rbms1a10095.687Seriola_lalandi_dorsalis
ENSXMAG00000001802rbms1a8151.171ENSSARG00000011085RBMS17851.111Sorex_araneus
ENSXMAG00000001802rbms1a8965.130ENSSPUG00000017163RBMS19364.943Sphenodon_punctatus
ENSXMAG00000001802rbms1a9965.217ENSSPAG00000000059RBMS19965.897Stegastes_partitus
ENSXMAG00000001802rbms1a10095.687ENSSPAG00000005371rbms1a10095.687Stegastes_partitus
ENSXMAG00000001802rbms1a8966.279ENSSSCG00000015888RBMS19962.121Sus_scrofa
ENSXMAG00000001802rbms1a8965.988ENSTGUG00000006606RBMS18965.278Taeniopygia_guttata
ENSXMAG00000001802rbms1a10088.398ENSTRUG00000017155rbms1a10088.398Takifugu_rubripes
ENSXMAG00000001802rbms1a9960.814ENSTRUG00000005466-9961.832Takifugu_rubripes
ENSXMAG00000001802rbms1a9464.365ENSTNIG00000016496RBMS19665.507Tetraodon_nigroviridis
ENSXMAG00000001802rbms1a8987.126ENSTNIG00000009477rbms1a9885.209Tetraodon_nigroviridis
ENSXMAG00000001802rbms1a8960.231ENSTBEG00000016156RBMS19559.780Tupaia_belangeri
ENSXMAG00000001802rbms1a8966.282ENSTTRG00000011058RBMS19565.840Tursiops_truncatus
ENSXMAG00000001802rbms1a8965.988ENSUAMG00000022331RBMS19065.278Ursus_americanus
ENSXMAG00000001802rbms1a8965.988ENSUMAG00000008605RBMS19365.278Ursus_maritimus
ENSXMAG00000001802rbms1a8666.667ENSVPAG00000002716RBMS18568.111Vicugna_pacos
ENSXMAG00000001802rbms1a8965.988ENSVVUG00000018682RBMS19765.278Vulpes_vulpes
ENSXMAG00000001802rbms1a9458.152ENSXETG00000016204rbms19458.974Xenopus_tropicalis
ENSXMAG00000001802rbms1a100100.000ENSXCOG00000001659rbms1a100100.000Xiphophorus_couchianus
ENSXMAG00000001802rbms1a8968.605ENSXCOG00000000211RBMS19368.605Xiphophorus_couchianus
ENSXMAG00000001802rbms1a9965.729ENSXMAG00000011405RBMS19966.240Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us