EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000001986 (Gene tree)
Gene ID: 102229404
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 24882 bases
Position: chr23:4078533-4103414
Accession: 102229404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000039144	Nucleoplasmin	PF03066.15	1.1e-38	1	1
ENSXMAP00000001984	Nucleoplasmin	PF03066.15	1.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000036122	-	2962	XM_005800565	ENSXMAP00000039144	297 (aa)	XP_005800622	UPI0003B5B299
ENSXMAT00000001989	-	1032	-	ENSXMAP00000001984	320 (aa)	-	M3ZIE2

Gene Model

Click here to download ENSXMAG00000001986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000001986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000001986	npm1b	100	77.926	ENSAPOG00000004268	npm1b	100	78.930	Acanthochromis_polyacanthus
ENSXMAG00000001986	npm1b	100	77.258	ENSAOCG00000012549	npm1b	100	77.258	Amphiprion_ocellaris
ENSXMAG00000001986	npm1b	100	76.589	ENSAPEG00000000868	npm1b	100	76.254	Amphiprion_percula
ENSXMAG00000001986	npm1b	100	78.930	ENSATEG00000006254	npm1b	100	78.930	Anabas_testudineus
ENSXMAG00000001986	npm1b	98	44.771	ENSACAG00000015626	-	100	43.564	Anolis_carolinensis
ENSXMAG00000001986	npm1b	50	84.564	ENSACLG00000013812	npm1b	71	83.444	Astatotilapia_calliptera
ENSXMAG00000001986	npm1b	98	60.396	ENSAMXG00000042148	npm1b	99	59.406	Astyanax_mexicanus
ENSXMAG00000001986	npm1b	70	34.091	ENSCAFG00000023359	-	67	36.782	Canis_familiaris
ENSXMAG00000001986	npm1b	98	44.194	ENSCPBG00000021221	-	60	43.322	Chrysemys_picta_bellii
ENSXMAG00000001986	npm1b	100	72.000	ENSCSEG00000004530	npm1b	100	70.333	Cynoglossus_semilaevis
ENSXMAG00000001986	npm1b	100	91.919	ENSCVAG00000013016	npm1b	100	91.919	Cyprinodon_variegatus
ENSXMAG00000001986	npm1b	99	63.696	ENSDARG00000037675	npm1b	99	63.696	Danio_rerio
ENSXMAG00000001986	npm1b	99	62.171	ENSELUG00000022123	npm1b	99	62.171	Esox_lucius
ENSXMAG00000001986	npm1b	94	43.299	ENSFALG00000003320	-	94	40.210	Ficedula_albicollis
ENSXMAG00000001986	npm1b	100	89.967	ENSFHEG00000020794	npm1b	100	89.967	Fundulus_heteroclitus
ENSXMAG00000001986	npm1b	98	59.322	ENSGMOG00000002689	npm1b	100	60.678	Gadus_morhua
ENSXMAG00000001986	npm1b	98	43.092	ENSGALG00000002197	-	73	43.548	Gallus_gallus
ENSXMAG00000001986	npm1b	100	96.633	ENSGAFG00000017709	npm1b	100	96.633	Gambusia_affinis
ENSXMAG00000001986	npm1b	98	74.490	ENSGACG00000016706	npm1b	100	73.810	Gasterosteus_aculeatus
ENSXMAG00000001986	npm1b	98	43.087	ENSGAGG00000020250	-	100	41.694	Gopherus_agassizii
ENSXMAG00000001986	npm1b	100	80.602	ENSHBUG00000019903	npm1b	95	80.602	Haplochromis_burtoni
ENSXMAG00000001986	npm1b	100	68.333	ENSHCOG00000003895	npm1b	100	67.667	Hippocampus_comes
ENSXMAG00000001986	npm1b	99	58.472	ENSIPUG00000020165	npm1b	99	57.807	Ictalurus_punctatus
ENSXMAG00000001986	npm1b	99	83.390	ENSKMAG00000008260	npm1b	99	85.085	Kryptolebias_marmoratus
ENSXMAG00000001986	npm1b	92	43.581	ENSLACG00000001779	-	100	43.554	Latimeria_chalumnae
ENSXMAG00000001986	npm1b	94	47.811	ENSLOCG00000001942	npm1b	100	48.148	Lepisosteus_oculatus
ENSXMAG00000001986	npm1b	72	73.973	ENSMAMG00000015335	npm1b	100	74.886	Mastacembelus_armatus
ENSXMAG00000001986	npm1b	93	43.110	ENSMGAG00000001591	-	100	43.056	Meleagris_gallopavo
ENSXMAG00000001986	npm1b	81	73.251	ENSMALG00000015383	npm1b	100	74.897	Monopterus_albus
ENSXMAG00000001986	npm1b	50	85.235	ENSNBRG00000014133	npm1b	82	84.106	Neolamprologus_brichardi
ENSXMAG00000001986	npm1b	99	72.727	ENSONIG00000001397	npm1b	98	69.707	Oreochromis_niloticus
ENSXMAG00000001986	npm1b	100	63.300	ENSOMEG00000003414	npm1b	100	60.943	Oryzias_melastigma
ENSXMAG00000001986	npm1b	99	57.929	ENSPKIG00000020050	npm1b	99	57.282	Paramormyrops_kingsleyae
ENSXMAG00000001986	npm1b	96	44.482	ENSPSIG00000011204	-	92	43.537	Pelodiscus_sinensis
ENSXMAG00000001986	npm1b	88	35.556	ENSPMAG00000004930	npm1b	99	35.154	Petromyzon_marinus
ENSXMAG00000001986	npm1b	100	96.296	ENSPFOG00000018357	npm1b	100	96.296	Poecilia_formosa
ENSXMAG00000001986	npm1b	50	84.564	ENSPNYG00000001427	npm1b	71	83.444	Pundamilia_nyererei
ENSXMAG00000001986	npm1b	98	59.000	ENSPNAG00000005498	npm1b	99	58.194	Pygocentrus_nattereri
ENSXMAG00000001986	npm1b	99	59.197	ENSSFOG00015005064	npm1b	100	58.863	Scleropages_formosus
ENSXMAG00000001986	npm1b	100	73.826	ENSSMAG00000008088	npm1b	100	73.490	Scophthalmus_maximus
ENSXMAG00000001986	npm1b	100	79.264	ENSSDUG00000007726	npm1b	100	78.930	Seriola_dumerili
ENSXMAG00000001986	npm1b	100	79.599	ENSSLDG00000021396	npm1b	100	79.264	Seriola_lalandi_dorsalis
ENSXMAG00000001986	npm1b	50	48.428	ENSSPUG00000017271	-	80	48.148	Sphenodon_punctatus
ENSXMAG00000001986	npm1b	100	77.592	ENSSPAG00000011152	npm1b	100	79.933	Stegastes_partitus
ENSXMAG00000001986	npm1b	93	42.907	ENSTGUG00000014970	-	100	42.907	Taeniopygia_guttata
ENSXMAG00000001986	npm1b	100	72.757	ENSTRUG00000008105	npm1b	95	70.764	Takifugu_rubripes
ENSXMAG00000001986	npm1b	99	69.767	ENSTNIG00000013057	npm1b	100	69.767	Tetraodon_nigroviridis
ENSXMAG00000001986	npm1b	99	41.587	ENSXETG00000008403	npm1	100	38.782	Xenopus_tropicalis