EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002047 (Gene tree)
Gene ID: -
Gene Symbol: plod3
Alias: cb479|cb816|diw|diwanka|fb72h05|im:6912725|lh3|wu:fb72f10|wu:fb72h05
Full Name: procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6366 bases
Position: chr14:20667108-20673473
Accession: ZDB-GENE-021031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000027714	2OG-FeII_Oxy	PF03171.20	4e-07	1	1
ENSXMAP00000002075	2OG-FeII_Oxy	PF03171.20	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002080	-	1098	-	ENSXMAP00000002075	365 (aa)	-	M3ZIN3
ENSXMAT00000039678	-	1032	-	ENSXMAP00000027714	343 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000002047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002047	plod3	98	67.967	ENSG00000106397	PLOD3	98	75.385	Homo_sapiens
ENSXMAG00000002047	plod3	97	64.507	ENSG00000152952	PLOD2	90	60.263	Homo_sapiens
ENSXMAG00000002047	plod3	98	90.808	ENSAPOG00000013652	plod3	50	85.440	Acanthochromis_polyacanthus
ENSXMAG00000002047	plod3	99	63.663	ENSAPOG00000013081	plod1a	50	63.663	Acanthochromis_polyacanthus
ENSXMAG00000002047	plod3	98	60.789	ENSAMEG00000013650	PLOD2	50	57.180	Ailuropoda_melanoleuca
ENSXMAG00000002047	plod3	98	64.345	ENSACIG00000018677	plod2	52	64.345	Amphilophus_citrinellus
ENSXMAG00000002047	plod3	98	88.611	ENSACIG00000009256	plod3	50	82.740	Amphilophus_citrinellus
ENSXMAG00000002047	plod3	97	63.380	ENSAOCG00000018734	plod1a	54	63.380	Amphiprion_ocellaris
ENSXMAG00000002047	plod3	98	90.808	ENSAOCG00000009132	plod3	50	85.165	Amphiprion_ocellaris
ENSXMAG00000002047	plod3	97	62.817	ENSAPEG00000006235	plod1a	51	62.817	Amphiprion_percula
ENSXMAG00000002047	plod3	98	90.808	ENSAPEG00000020103	plod3	51	90.808	Amphiprion_percula
ENSXMAG00000002047	plod3	100	62.032	ENSATEG00000022077	plod1a	51	62.032	Anabas_testudineus
ENSXMAG00000002047	plod3	98	65.460	ENSAPLG00000011324	PLOD1	50	62.431	Anas_platyrhynchos
ENSXMAG00000002047	plod3	98	59.737	ENSAPLG00000011127	PLOD2	52	59.737	Anas_platyrhynchos
ENSXMAG00000002047	plod3	98	60.526	ENSACAG00000006657	PLOD2	50	60.526	Anolis_carolinensis
ENSXMAG00000002047	plod3	98	63.510	ENSANAG00000030377	PLOD2	50	60.000	Aotus_nancymaae
ENSXMAG00000002047	plod3	98	65.181	ENSANAG00000026221	PLOD1	51	65.181	Aotus_nancymaae
ENSXMAG00000002047	plod3	98	61.316	ENSACLG00000027422	plod2	50	61.316	Astatotilapia_calliptera
ENSXMAG00000002047	plod3	98	66.017	ENSBTAG00000002052	PLOD1	50	66.017	Bos_taurus
ENSXMAG00000002047	plod3	98	64.067	ENSBTAG00000007331	PLOD2	53	60.526	Bos_taurus
ENSXMAG00000002047	plod3	98	63.788	ENSCJAG00000001578	PLOD2	55	63.788	Callithrix_jacchus
ENSXMAG00000002047	plod3	98	60.789	ENSCAFG00000008101	PLOD2	50	57.180	Canis_familiaris
ENSXMAG00000002047	plod3	98	64.345	ENSCAFG00020011739	PLOD2	50	64.345	Canis_lupus_dingo
ENSXMAG00000002047	plod3	98	66.017	ENSCHIG00000025580	PLOD1	50	62.396	Capra_hircus
ENSXMAG00000002047	plod3	98	63.788	ENSCHIG00000018266	PLOD2	50	60.263	Capra_hircus
ENSXMAG00000002047	plod3	98	65.460	ENSTSYG00000035536	PLOD1	53	65.460	Carlito_syrichta
ENSXMAG00000002047	plod3	97	64.789	ENSTSYG00000007171	PLOD2	55	64.789	Carlito_syrichta
ENSXMAG00000002047	plod3	98	62.117	ENSCAPG00000010686	PLOD2	53	62.117	Cavia_aperea
ENSXMAG00000002047	plod3	97	60.282	ENSCPOG00000014514	PLOD2	50	60.282	Cavia_porcellus
ENSXMAG00000002047	plod3	98	63.788	ENSCCAG00000025733	PLOD2	50	60.263	Cebus_capucinus
ENSXMAG00000002047	plod3	97	64.225	ENSCATG00000041420	PLOD2	50	60.638	Cercocebus_atys
ENSXMAG00000002047	plod3	98	60.724	ENSCATG00000017580	PLOD1	50	60.724	Cercocebus_atys
ENSXMAG00000002047	plod3	97	65.070	ENSCLAG00000008696	PLOD2	50	57.441	Chinchilla_lanigera
ENSXMAG00000002047	plod3	97	60.638	ENSCSAG00000011365	PLOD2	51	56.397	Chlorocebus_sabaeus
ENSXMAG00000002047	plod3	97	64.225	ENSCANG00000032726	PLOD2	51	56.397	Colobus_angolensis_palliatus
ENSXMAG00000002047	plod3	98	64.624	ENSCANG00000000277	PLOD1	50	64.624	Colobus_angolensis_palliatus
ENSXMAG00000002047	plod3	97	65.070	ENSCGRG00001022906	Plod2	50	57.180	Cricetulus_griseus_chok1gshd
ENSXMAG00000002047	plod3	98	67.688	ENSCGRG00001017088	Plod3	50	67.688	Cricetulus_griseus_chok1gshd
ENSXMAG00000002047	plod3	98	67.409	ENSCGRG00000009240	Plod3	54	67.409	Cricetulus_griseus_crigri
ENSXMAG00000002047	plod3	97	65.070	ENSCGRG00000001261	Plod2	50	61.436	Cricetulus_griseus_crigri
ENSXMAG00000002047	plod3	98	92.758	ENSCVAG00000015237	plod3	56	92.758	Cyprinodon_variegatus
ENSXMAG00000002047	plod3	98	84.123	ENSDARG00000076317	plod3	50	78.846	Danio_rerio
ENSXMAG00000002047	plod3	98	64.345	ENSDARG00000011821	plod2	50	60.789	Danio_rerio
ENSXMAG00000002047	plod3	98	56.693	ENSDNOG00000005149	PLOD2	50	56.693	Dasypus_novemcinctus
ENSXMAG00000002047	plod3	98	63.510	ENSDORG00000003217	Plod2	51	63.510	Dipodomys_ordii
ENSXMAG00000002047	plod3	98	56.593	ENSDORG00000008737	Plod1	51	56.593	Dipodomys_ordii
ENSXMAG00000002047	plod3	98	64.345	ENSEASG00005000164	PLOD2	50	60.789	Equus_asinus_asinus
ENSXMAG00000002047	plod3	98	64.903	ENSEASG00005016643	PLOD1	55	64.903	Equus_asinus_asinus
ENSXMAG00000002047	plod3	98	64.345	ENSECAG00000009297	PLOD2	50	60.789	Equus_caballus
ENSXMAG00000002047	plod3	98	51.579	ENSEEUG00000015012	PLOD2	50	51.579	Erinaceus_europaeus
ENSXMAG00000002047	plod3	97	65.352	ENSFCAG00000023549	PLOD2	50	57.441	Felis_catus
ENSXMAG00000002047	plod3	98	65.460	ENSFALG00000010022	PLOD1	50	62.431	Ficedula_albicollis
ENSXMAG00000002047	plod3	98	59.474	ENSFALG00000007086	PLOD2	50	56.136	Ficedula_albicollis
ENSXMAG00000002047	plod3	98	60.789	ENSFDAG00000011434	PLOD2	57	60.789	Fukomys_damarensis
ENSXMAG00000002047	plod3	98	65.181	ENSFDAG00000013861	PLOD1	51	65.181	Fukomys_damarensis
ENSXMAG00000002047	plod3	98	62.117	ENSFHEG00000021014	plod1a	54	62.117	Fundulus_heteroclitus
ENSXMAG00000002047	plod3	97	63.944	ENSGMOG00000003290	plod1a	51	63.944	Gadus_morhua
ENSXMAG00000002047	plod3	98	65.738	ENSGALG00000004531	PLOD1	50	62.707	Gallus_gallus
ENSXMAG00000002047	plod3	98	63.231	ENSGALG00000006783	PLOD2	54	59.737	Gallus_gallus
ENSXMAG00000002047	plod3	98	98.607	ENSGAFG00000020388	plod3	98	98.607	Gambusia_affinis
ENSXMAG00000002047	plod3	97	64.507	ENSGGOG00000014284	PLOD2	51	56.658	Gorilla_gorilla
ENSXMAG00000002047	plod3	98	64.624	ENSGGOG00000013645	PLOD1	50	64.624	Gorilla_gorilla
ENSXMAG00000002047	plod3	100	61.190	ENSHBUG00000020042	plod1a	53	61.190	Haplochromis_burtoni
ENSXMAG00000002047	plod3	98	64.624	ENSHBUG00000015944	plod2	56	64.624	Haplochromis_burtoni
ENSXMAG00000002047	plod3	97	65.070	ENSHGLG00000019219	PLOD2	51	57.180	Heterocephalus_glaber_female
ENSXMAG00000002047	plod3	97	65.070	ENSHGLG00100003295	PLOD2	51	57.180	Heterocephalus_glaber_male
ENSXMAG00000002047	plod3	98	64.624	ENSIPUG00000001033	plod2	50	61.053	Ictalurus_punctatus
ENSXMAG00000002047	plod3	97	64.789	ENSSTOG00000025550	PLOD2	50	56.919	Ictidomys_tridecemlineatus
ENSXMAG00000002047	plod3	98	63.788	ENSJJAG00000013305	Plod2	50	63.788	Jaculus_jaculus
ENSXMAG00000002047	plod3	100	62.299	ENSLBEG00000015540	plod1a	52	62.299	Labrus_bergylta
ENSXMAG00000002047	plod3	97	64.507	ENSLAFG00000001931	PLOD2	51	63.788	Loxodonta_africana
ENSXMAG00000002047	plod3	98	64.345	ENSMFAG00000037610	PLOD1	50	64.345	Macaca_fascicularis
ENSXMAG00000002047	plod3	98	68.245	ENSMFAG00000033241	PLOD3	50	68.245	Macaca_fascicularis
ENSXMAG00000002047	plod3	97	64.225	ENSMFAG00000038516	PLOD2	53	60.638	Macaca_fascicularis
ENSXMAG00000002047	plod3	97	60.638	ENSMMUG00000011577	PLOD2	53	60.638	Macaca_mulatta
ENSXMAG00000002047	plod3	98	67.967	ENSMNEG00000036923	PLOD3	50	67.967	Macaca_nemestrina
ENSXMAG00000002047	plod3	97	64.225	ENSMNEG00000029275	PLOD2	53	60.638	Macaca_nemestrina
ENSXMAG00000002047	plod3	98	67.967	ENSMLEG00000036735	PLOD3	50	63.736	Mandrillus_leucophaeus
ENSXMAG00000002047	plod3	97	63.944	ENSMLEG00000032487	PLOD2	51	56.136	Mandrillus_leucophaeus
ENSXMAG00000002047	plod3	100	56.522	ENSMZEG00005019823	plod2	99	56.250	Maylandia_zebra
ENSXMAG00000002047	plod3	98	64.903	ENSMZEG00005017645	plod2	50	61.316	Maylandia_zebra
ENSXMAG00000002047	plod3	98	66.295	ENSMGAG00000006085	PLOD1	50	63.260	Meleagris_gallopavo
ENSXMAG00000002047	plod3	97	64.789	ENSMAUG00000003215	Plod2	50	56.919	Mesocricetus_auratus
ENSXMAG00000002047	plod3	97	65.352	ENSMICG00000049252	PLOD2	51	57.441	Microcebus_murinus
ENSXMAG00000002047	plod3	78	67.832	ENSMICG00000005429	-	91	67.832	Microcebus_murinus
ENSXMAG00000002047	plod3	98	63.510	ENSMOCG00000014848	Plod2	51	56.397	Microtus_ochrogaster
ENSXMAG00000002047	plod3	98	64.067	ENSMMOG00000013171	plod1a	51	64.067	Mola_mola
ENSXMAG00000002047	plod3	97	68.232	ENSMODG00000005017	PLOD3	51	68.232	Monodelphis_domestica
ENSXMAG00000002047	plod3	98	62.953	ENSMALG00000016161	plod1a	51	62.953	Monopterus_albus
ENSXMAG00000002047	plod3	97	64.789	ENSMUSG00000032374	Plod2	51	56.919	Mus_musculus
ENSXMAG00000002047	plod3	97	64.789	MGP_PahariEiJ_G0015394	Plod2	51	56.919	Mus_pahari
ENSXMAG00000002047	plod3	97	65.070	MGP_SPRETEiJ_G0033668	Plod2	51	57.180	Mus_spretus
ENSXMAG00000002047	plod3	98	60.789	ENSMPUG00000011826	PLOD2	50	60.789	Mustela_putorius_furo
ENSXMAG00000002047	plod3	98	68.802	ENSMPUG00000015891	PLOD3	52	68.802	Mustela_putorius_furo
ENSXMAG00000002047	plod3	90	60.286	ENSMLUG00000023471	-	100	60.286	Myotis_lucifugus
ENSXMAG00000002047	plod3	97	65.352	ENSNGAG00000008701	-	97	65.352	Nannospalax_galili
ENSXMAG00000002047	plod3	97	68.451	ENSNGAG00000018568	Plod3	50	63.912	Nannospalax_galili
ENSXMAG00000002047	plod3	97	64.507	ENSNGAG00000000687	Plod2	51	64.507	Nannospalax_galili
ENSXMAG00000002047	plod3	98	65.181	ENSNBRG00000017408	plod2	51	65.181	Neolamprologus_brichardi
ENSXMAG00000002047	plod3	97	64.507	ENSNLEG00000005034	PLOD2	51	56.658	Nomascus_leucogenys
ENSXMAG00000002047	plod3	98	65.738	ENSMEUG00000008093	PLOD1	51	65.738	Notamacropus_eugenii
ENSXMAG00000002047	plod3	97	64.789	ENSOPRG00000006783	PLOD1	50	64.789	Ochotona_princeps
ENSXMAG00000002047	plod3	98	64.624	ENSODEG00000009443	PLOD2	51	57.702	Octodon_degus
ENSXMAG00000002047	plod3	98	60.789	ENSONIG00000005883	plod2	50	60.789	Oreochromis_niloticus
ENSXMAG00000002047	plod3	98	61.838	ENSONIG00000017978	-	50	59.116	Oreochromis_niloticus
ENSXMAG00000002047	plod3	52	70.621	ENSOANG00000012852	-	100	70.621	Ornithorhynchus_anatinus
ENSXMAG00000002047	plod3	98	66.852	ENSOANG00000004585	-	84	66.852	Ornithorhynchus_anatinus
ENSXMAG00000002047	plod3	97	61.170	ENSOCUG00000001461	PLOD2	50	57.180	Oryctolagus_cuniculus
ENSXMAG00000002047	plod3	98	62.953	ENSORLG00000018904	plod1a	50	60.221	Oryzias_latipes
ENSXMAG00000002047	plod3	98	90.251	ENSORLG00000029631	plod3	99	90.251	Oryzias_latipes
ENSXMAG00000002047	plod3	98	89.972	ENSORLG00015001924	plod3	99	87.179	Oryzias_latipes_hsok
ENSXMAG00000002047	plod3	98	62.674	ENSOMEG00000022732	plod1a	50	59.669	Oryzias_melastigma
ENSXMAG00000002047	plod3	98	90.251	ENSOMEG00000006893	plod3	50	84.615	Oryzias_melastigma
ENSXMAG00000002047	plod3	97	54.521	ENSOGAG00000009905	PLOD2	51	54.521	Otolemur_garnettii
ENSXMAG00000002047	plod3	99	58.564	ENSOGAG00000005351	PLOD1	50	58.564	Otolemur_garnettii
ENSXMAG00000002047	plod3	98	66.017	ENSOARG00000017960	PLOD1	51	66.017	Ovis_aries
ENSXMAG00000002047	plod3	97	64.507	ENSPPAG00000039540	PLOD2	51	56.658	Pan_paniscus
ENSXMAG00000002047	plod3	98	64.903	ENSPPAG00000034724	PLOD1	50	64.903	Pan_paniscus
ENSXMAG00000002047	plod3	98	64.624	ENSPPRG00000012277	PLOD2	50	61.053	Panthera_pardus
ENSXMAG00000002047	plod3	98	64.624	ENSPTIG00000018891	PLOD2	54	61.053	Panthera_tigris_altaica
ENSXMAG00000002047	plod3	98	64.903	ENSPTRG00000000158	PLOD1	50	64.903	Pan_troglodytes
ENSXMAG00000002047	plod3	97	64.507	ENSPTRG00000015494	PLOD2	51	56.658	Pan_troglodytes
ENSXMAG00000002047	plod3	97	64.225	ENSPANG00000020900	PLOD2	53	60.638	Papio_anubis
ENSXMAG00000002047	plod3	98	67.967	ENSPANG00000021830	PLOD3	50	67.967	Papio_anubis
ENSXMAG00000002047	plod3	100	63.873	ENSPKIG00000009566	plod2	53	63.873	Paramormyrops_kingsleyae
ENSXMAG00000002047	plod3	98	64.624	ENSPSIG00000011107	PLOD1	50	61.602	Pelodiscus_sinensis
ENSXMAG00000002047	plod3	97	60.638	ENSPEMG00000023460	Plod2	52	60.638	Peromyscus_maniculatus_bairdii
ENSXMAG00000002047	plod3	98	61.680	ENSPMAG00000008153	plod2	97	68.050	Petromyzon_marinus
ENSXMAG00000002047	plod3	98	65.181	ENSPMAG00000003203	-	50	61.878	Petromyzon_marinus
ENSXMAG00000002047	plod3	97	65.634	ENSPCIG00000018522	PLOD2	51	57.702	Phascolarctos_cinereus
ENSXMAG00000002047	plod3	98	62.674	ENSPLAG00000018953	plod1a	54	62.674	Poecilia_latipinna
ENSXMAG00000002047	plod3	98	96.936	ENSPLAG00000004494	plod3	50	90.659	Poecilia_latipinna
ENSXMAG00000002047	plod3	98	96.936	ENSPMEG00000001542	plod3	50	90.659	Poecilia_mexicana
ENSXMAG00000002047	plod3	97	60.904	ENSPPYG00000029800	-	97	60.904	Pongo_abelii
ENSXMAG00000002047	plod3	98	68.245	ENSPVAG00000001241	PLOD3	51	68.245	Pteropus_vampyrus
ENSXMAG00000002047	plod3	98	64.624	ENSPNYG00000006024	plod2	52	64.624	Pundamilia_nyererei
ENSXMAG00000002047	plod3	100	60.335	ENSPNYG00000000578	plod1a	50	60.335	Pundamilia_nyererei
ENSXMAG00000002047	plod3	98	85.196	ENSPNAG00000021984	plod3	50	78.846	Pygocentrus_nattereri
ENSXMAG00000002047	plod3	97	65.070	ENSRNOG00000030183	Plod2	50	61.436	Rattus_norvegicus
ENSXMAG00000002047	plod3	97	64.225	ENSRBIG00000042963	PLOD2	56	60.638	Rhinopithecus_bieti
ENSXMAG00000002047	plod3	97	60.638	ENSRROG00000031649	PLOD2	51	56.397	Rhinopithecus_roxellana
ENSXMAG00000002047	plod3	98	68.524	ENSSBOG00000020136	PLOD3	50	64.011	Saimiri_boliviensis_boliviensis
ENSXMAG00000002047	plod3	98	63.788	ENSSBOG00000030460	PLOD2	57	63.788	Saimiri_boliviensis_boliviensis
ENSXMAG00000002047	plod3	97	65.634	ENSSHAG00000017470	PLOD2	51	61.968	Sarcophilus_harrisii
ENSXMAG00000002047	plod3	97	65.915	ENSSFOG00015010374	plod1a	54	65.915	Scleropages_formosus
ENSXMAG00000002047	plod3	98	65.169	ENSSFOG00015014512	plod2	50	57.963	Scleropages_formosus
ENSXMAG00000002047	plod3	98	65.460	ENSSMAG00000011129	plod1a	50	61.918	Scophthalmus_maximus
ENSXMAG00000002047	plod3	98	89.136	ENSSDUG00000002200	plod3	50	84.066	Seriola_dumerili
ENSXMAG00000002047	plod3	89	66.272	ENSSLDG00000007569	plod3	62	70.861	Seriola_lalandi_dorsalis
ENSXMAG00000002047	plod3	98	52.105	ENSSARG00000003690	PLOD2	55	52.105	Sorex_araneus
ENSXMAG00000002047	plod3	98	64.345	ENSSSCG00000011689	PLOD2	57	60.789	Sus_scrofa
ENSXMAG00000002047	plod3	98	66.017	ENSSSCG00000003433	PLOD1	50	62.953	Sus_scrofa
ENSXMAG00000002047	plod3	98	62.674	ENSTGUG00000008767	PLOD2	51	62.674	Taeniopygia_guttata
ENSXMAG00000002047	plod3	98	66.574	ENSTGUG00000002406	-	50	63.536	Taeniopygia_guttata
ENSXMAG00000002047	plod3	98	63.231	ENSTRUG00000008466	plod1	51	63.231	Takifugu_rubripes
ENSXMAG00000002047	plod3	98	67.688	ENSTBEG00000014615	PLOD3	70	67.688	Tupaia_belangeri
ENSXMAG00000002047	plod3	98	68.056	ENSUAMG00000013690	PLOD3	50	68.056	Ursus_americanus
ENSXMAG00000002047	plod3	98	64.345	ENSUAMG00000020858	PLOD2	54	64.345	Ursus_americanus
ENSXMAG00000002047	plod3	98	60.789	ENSUMAG00000012593	PLOD2	54	60.789	Ursus_maritimus
ENSXMAG00000002047	plod3	98	66.017	ENSUMAG00000022265	PLOD1	50	62.953	Ursus_maritimus
ENSXMAG00000002047	plod3	98	64.345	ENSVVUG00000008510	PLOD2	50	64.345	Vulpes_vulpes
ENSXMAG00000002047	plod3	98	62.117	ENSXCOG00000002023	plod1a	60	62.117	Xiphophorus_couchianus